FC930374

Overview
NameFC930374
Unique NameFC930374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2)

HSP 1 Score: 366.696 bits (940), Expect = 6.567e-101
Identity = 169/206 (82.04%), Postives = 187/206 (90.78%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFP 618
            KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN+G LKICDFG+SRQYGSPLKPYT LVVTLWYRAPELLLG K+YSTA+DMWSVGCIMAELLAK+PLF+G TE +Q+DKIF+TLGTP E +WPG ++LPG K NF KQPYN LR +FPAASF+G P+LSE+GFDLLN LLTYDPEKR++ D AL H WFREVPLPKSKDFMPTFP
Sbjct:  467 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFP 672          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica GN=CDKG-2 PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.567e-101
Identity = 169/206 (82.04%), Postives = 187/206 (90.78%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFP 618
            KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN+G LKICDFG+SRQYGSPLKPYT LVVTLWYRAPELLLG K+YSTA+DMWSVGCIMAELLAK+PLF+G TE +Q+DKIF+TLGTP E +WPG ++LPG K NF KQPYN LR +FPAASF+G P+LSE+GFDLLN LLTYDPEKR++ D AL H WFREVPLPKSKDFMPTFP
Sbjct:  467 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFP 672          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.051e-98
Identity = 165/213 (77.46%), Postives = 189/213 (88.73%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 639
            KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN+G LKICDFG+SRQYGSPLKPYT LVVTLWYRAPELLLGAK YSTA+DMWS+GCIM ELL+K PLF+G +E+DQ+DKIF+TLGTP E +WPG S+LPGA   F KQ +N LR +F A SFTG P+LSE+GFDLLNRLLTYDPEKRI+ +DALNH WFRE+PLP+SKDFMPTFP  + +++
Sbjct:  451 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDR 663          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.051e-98
Identity = 165/213 (77.46%), Postives = 189/213 (88.73%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 639
            KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN+G LKICDFG+SRQYGSPLKPYT LVVTLWYRAPELLLGAK YSTA+DMWS+GCIM ELL+K PLF+G +E+DQ+DKIF+TLGTP E +WPG S+LPGA   F KQ +N LR +F A SFTG P+LSE+GFDLLNRLLTYDPEKRI+ +DALNH WFRE+PLP+SKDFMPTFP  + +++
Sbjct:  451 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDR 663          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CD11B_HUMAN (Cell division protein kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3)

HSP 1 Score: 280.411 bits (716), Expect = 6.190e-75
Identity = 133/214 (62.15%), Postives = 166/214 (77.57%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGA-KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 639
            K LM+QLL GVK+LHDNW+LHRDLKTSNLLL++ G+LK+ DFG++R+YGSPLK YT +VVTLWYRAPELLLGAK+YSTAVDMWSVGCI  ELL +KPLF G +E+DQI+K+FK LGTP+E +WPG SELP   K  F++ PYN LRKRF A       +LS+ GFDL+N+ LTY P +RI+ +D L H +FRE PLP      PT+P +  + +
Sbjct:  540 KTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSEIDQINKVFKDLGTPSEKIWPGYSELPAVKKMTFSEHPYNNLRKRFGA-------LLSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQR 746          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CD11A_HUMAN (Cell division protein kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=3)

HSP 1 Score: 277.33 bits (708), Expect = 5.240e-74
Identity = 132/214 (61.68%), Postives = 165/214 (77.10%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGA-KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 639
            K LM+QLL GVK+LHDNW+LHRDLKTSNLLL++ G+LK+ DFG++R+YGSPLK YT +VVT WYRAPELLLGAK+YSTAVDMWSVGCI  ELL +KPLF G +E+DQI+K+FK LGTP+E +WPG SELP   K  F++ PYN LRKRF A       +LS+ GFDL+N+ LTY P +RI+ +D L H +FRE PLP      PT+P +  + +
Sbjct:  525 KTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKVFKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGA-------LLSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQR 731          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK11_MOUSE (Cell division protein kinase 11 OS=Mus musculus GN=Cdk11 PE=1 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 8.938e-74
Identity = 131/214 (61.21%), Postives = 165/214 (77.10%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGA-KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 639
            K LM+QLL GVK+LHDNW+LHRDLKTSNLLL++ G+LK+ DFG++R+YGSPLK YT +VVTLWYRAPELLLGAK+YSTAVDMWSVGCI  ELL +KPLF G +++DQI+KIFK LGTP+E +WPG ++LP   K  F++ PYN LRKRF A       +LS+ GFDL+N+ LTY P +RI  +D L H +FRE PLP      PT+P +  + +
Sbjct:  529 KTLMIQLLSGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDLGTPSEKIWPGYNDLPAVKKMTFSEYPYNNLRKRFGA-------LLSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQR 735          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.600e-73
Identity = 131/207 (63.29%), Postives = 160/207 (77.29%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGA-KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFP 618
            K LM+QLL GVK+LHDNW+LHRDLKTSNLLL + G+LK+ DFG++R+YGSPLK YT +VVTLWYRAPELLLGAK+YSTA DMWSVGCI  ELL +KPLF G +++DQI+KIFK +GTP+E +WPG SELP   K  F++ PYN LRKRF A       +LS+ GFDL+N+ LTY P +RI  +D L H +FRE PLP      PT+P
Sbjct:  181 KTLMIQLLSGVKHLHDNWILHRDLKTSNLLLTHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDIGTPSEKIWPGYSELPAVKKMTFSELPYNNLRKRFGA-------LLSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRETPLPIDPSMFPTWP 380          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.571e-68
Identity = 123/214 (57.48%), Postives = 159/214 (74.30%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKA-NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 639
            K L+ QLL G++++H  W+LHRDLKTSNLL++++G+LKI DFG++R+YG PLK +TS+VVTLWYR+PELLLG + YST VDMWSVGCIMAE +  KPLF G  E++QI KIF  +GTPTE++WPG++EL G KA  F K PYN LRKRF A       +L+++GF LLN LLT DP+ R +   AL+H WF E P P   +  PTFP +  +NK
Sbjct:  462 KTLLQQLLSGIEHMHKLWILHRDLKTSNLLMSHKGILKIADFGLAREYGDPLKKFTSIVVTLWYRSPELLLGTRLYSTPVDMWSVGCIMAEFILLKPLFPGRGELEQIKKIFMEMGTPTESIWPGVTELDGWKALTFEKYPYNQLRKRFLAGR-----LLNDTGFKLLNGLLTLDPKNRFSATQALDHEWFTEEPYPVPPEEFPTFPAKSEQNK 670          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: KP58_DROME (Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.095e-63
Identity = 117/212 (55.19%), Postives = 151/212 (71.23%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAK------ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFP 618
            KCL  QLL  V +LHDNW+LHRDLKTSNLLL+++G+LK+ DFG++R+YGSP+K YTSLVVTLWYRAPELLL +  YST +D+WSVGCI AE L   PLF G +E+D++++IFK LGTP E +WPG +ELP  K      + F + P + LRK F   +       SE G  LL  LLTYDP++R++ D AL H +F+E+PLP      PT+P
Sbjct:  663 KCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLRKHFQEKT-------SEMGLSLLQGLLTYDPKQRLSADAALKHGFFKELPLPIDPSMFPTWP 867          
The following BLAST results are available for this feature:
BLAST of FC930374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKG2_ORYSJ6.567e-10182.04Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG2_ORYSI6.567e-10182.04Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSJ3.051e-9877.46Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI3.051e-9877.46Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CD11B_HUMAN6.190e-7562.15Cell division protein kinase 11B OS=Homo sapiens G... [more]
CD11A_HUMAN5.240e-7461.68Cell division protein kinase 11A OS=Homo sapiens G... [more]
CDK11_MOUSE8.938e-7461.21Cell division protein kinase 11 OS=Mus musculus GN... [more]
CDK11_RAT2.600e-7363.29Cell division protein kinase 11 OS=Rattus norvegic... [more]
YP62_CAEEL9.571e-6857.48Putative serine/threonine-protein kinase B0495.2 O... [more]
KP58_DROME1.095e-6355.19Serine/threonine-protein kinase PITSLRE OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionC34006H03EF PostHarvC1 Citrus clementina cDNA clone C34006H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930374 ID=FC930374; Name=FC930374; organism=Citrus clementina; type=EST; length=690bp
AAATGCTTGATGCTACAGCTTTTAGAGGGTGTCAAGTATCTTCATGATAA
TTGGGTGCTTCACAGGGATTTGAAAACATCAAATCTTCTTTTGAATAACC
AGGGCGTTTTAAAGATTTGCGACTTTGGGATGTCACGCCAGTATGGAAGC
CCACTAAAGCCATATACATCACTGGTTGTCACATTATGGTATAGAGCTCC
GGAACTTCTACTTGGAGCAAAGAAGTATTCTACTGCAGTTGACATGTGGT
CAGTTGGTTGTATAATGGCTGAACTTTTGGCCAAAAAACCATTGTTTAGT
GGGACAACTGAAGTTGACCAAATTGACAAGATTTTCAAAACACTAGGCAC
TCCAACTGAGACAGTTTGGCCTGGGTTATCTGAGTTGCCAGGAGCCAAAG
CAAATTTTGCTAAACAACCGTATAATCTGTTGCGGAAGAGGTTTCCTGCC
GCTTCTTTTACAGGATCTCCAGTTCTCTCAGAGTCCGGATTTGATTTGTT
AAACAGACTTTTGACTTATGACCCTGAGAAGCGAATAACGGTAGATGACG
CCCTTAATCATTATTGGTTCCGTGAGGTTCCTCTTCCCAAATCCAAGGAC
TTCATGCCTACCTTCCCCCCCCAGCATGCTAGGAACAAGTAGCTGATGAT
ATGACTGAACGTGGCATTATATAATTCAGATAACTTTTTG
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