FC930376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930376 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.581e-62 Identity = 124/183 (67.76%), Postives = 145/183 (79.23%), Query Frame = 2 Query: 155 LLGFKSSFSSHHRNLSLSTTHQDVSRRS----SKNNVTTKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFP 691 LLGF SF +NL +S+ D S RS SKN T+AFF+N + ++SRP+ K+QEL VYE+NE DRNSPA+LKL +KP L +GDLVPFTNKLYTGDL+KR+GITAGLCVLI+H PEK GDRFEA YSFYFGDYGH+SVQG YLTYEDT+LAVTGGSGIFEG YGQVKL Q+V+P Sbjct: 32 LLGFSRSF----QNLGISSNGPDFSSRSRSTTSKNLNVTRAFFWNW-GKKTENSRPS--KIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYP 207
BLAST of FC930376 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.346e-60 Identity = 119/179 (66.48%), Postives = 135/179 (75.42%), Query Frame = 2 Query: 158 LGFKSSFSSHHRNLSLSTTHQDVSRRSSKNNVTTKAFFFNK-PSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFP 691 LGF SF N +S+ +S R+ +T FF SS D SRP K+QEL VYE NE DRNSPA+LKL +KP+ L +GDLVPFTNKLYTGDL KRIGITAGLCVLI+H PEKKGDRFEA YSFYFGDYGHISVQG YLTYEDT+LA+TGGSG+FEG YGQVKL Q+V+P Sbjct: 31 LGFSRSF----HNQRISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRPT--KIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYP 203
BLAST of FC930376 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.305e-52 Identity = 114/209 (54.55%), Postives = 138/209 (66.03%), Query Frame = 2 Query: 74 ASASSLKPVXXXXXXXXXXXXXXETQRLLGFKSSFSSHHRNLSLSTTHQDVSRRSS---KNNVTTKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFP 691 +SA SL+ + LLG SF +NL +S+ D S SS K N+T S + P +KVQEL VYEINE DR+SP ILK + +GDLVPFTNKLYTGDL+KR+GITAGLCV+I+H PEKKG+RFEA YSFYFGDYGH+SVQG YLTYED++LA+TGG+GIFEG YGQVKL Q+V+P Sbjct: 3 SSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSF----QNLGISSNGSDFSYPSSFTAKKNLTASRAL----SQNGNIENPRPSKVQELSVYEINELDRHSPKILK-NAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYP 202
BLAST of FC930376 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.140e-51 Identity = 104/179 (58.10%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 155 LLGFKSSFSSHHRNLSLSTTHQDVSRRSSKNNVTTKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFP 691 LLGF SF + + + + S K T+A N +++ P +KVQEL VYEIN+ DR+SP ILK + +GDLVPFTNKLYTGDL+KR+GITAGLCV+I+H PEK GDRFEA YSFYFGDYGH+SVQG YLTYED++LA+TGG+GIFEG YGQVKL Q+V+P Sbjct: 30 LLGFSKSFQNFGISSNGPGSSSPTSFTPKKKLTPTRALSQNLGNTE----NPRPSKVQELSVYEINDLDRHSPKILK-NAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYP 203 The following BLAST results are available for this feature:
BLAST of FC930376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930376 ID=FC930376; Name=FC930376; organism=Citrus clementina; type=EST; length=692bpback to top |