FC930383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930383 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.297e-23 Identity = 51/73 (69.86%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 151 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL 369 VP K + DPLKRVP KP F+LSQ+KKAIPPHCF+RSVLRSFSYVV+DLTIAF YY+A Y H LP PL Sbjct: 9 VPPANRKSEVDPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPGPL 81
BLAST of FC930383 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.070e-21 Identity = 43/73 (58.90%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 151 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL 369 V +P K ++D LKRVPC PPFT+ ++KKAIPPHCF+RS+ RSFSY++ D+ +A FYY+A TY LPHPL Sbjct: 9 VSPSPKKSETDTLKRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPL 81
BLAST of FC930383 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 151 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL 369 VP++ K ++D KRVPC KPPF++ +KKAIPPHCF+RS+ RSFSY++ D+ IA FYY+A Y LP PL Sbjct: 9 VPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPL 81
BLAST of FC930383 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.305e-19 Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 184 PLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHP 366 PL RVP +KPPFT+ Q+KKAIPPHCF+RS+L SFSYVV+DL+ AF+F YIA TY H LP P Sbjct: 25 PLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSFSYVVYDLSFAFIF-YIATTYFHLLPQP 84
BLAST of FC930383 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.217e-15 Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 169 KVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL 369 + PL PPFT+S +K+AIPPHCF+RSV+RS Y+VHD IA++FY++AD YI LP PL Sbjct: 8 RTSQKPLMERVSVDPPFTVSDLKQAIPPHCFKRSVIRSSYYIVHDAIIAYIFYFLADKYIPILPAPL 74 The following BLAST results are available for this feature:
BLAST of FC930383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930383 ID=FC930383; Name=FC930383; organism=Citrus clementina; type=EST; length=374bpback to top |