FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.555e-35
Identity = 79/177 (44.63%), Postives = 114/177 (64.41%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGS-----ERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S+ VL TGAK+P +GLGTW++      EAVK A+ +GYR+IDCAH+Y NE EVG  L E  +G  +KRED+F+ S L+C+ +  N ++   + +L++L + YLDLYL+HWP    +GF    DP    G      +   F+    + W+AME LVD GLV+AIGVSNF   Q++++
Sbjct:    2 ASHLVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWP----TGFKPGKDPFPLDGDGNVVPDESDFV----ETWEAMEELVDEGLVKAIGVSNFNHLQVEKI 170          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.249e-34
Identity = 84/172 (48.84%), Postives = 111/172 (64.53%), Query Frame = 2
Query:  206 YFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF---KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            Y  L TG K+P IGLGTW++      +AVK AL VGYR+IDCA +YGNE EVGEA+ E+    KG LKRE+VF+TS L+ + +  + +E  +R +L+ L + YLDLYLMHWP   A   GD   P +  GS +   L   K  WKAME LV+ GL +AIG+SNF   Q+ ++
Sbjct:    7 YETLYTGQKMPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKG-LKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWP--YAFKRGDQVFPQNPDGSVQYD-LTDYKDTWKAMEKLVEKGLAKAIGLSNFNKRQMDDI 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 2
Query:  206 YFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKG--SLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            Y  L TG KIP IGLGTW++      +AVK AL VGYR+IDCA +YGNE EVGEA+ E+      L RE+VF+TS L+ + +  + +E  +R +L++L + YLDLYLMHWP   A   GD   P +  GS +   L   K  WKAME LV  GL +AIG+SNF   QI ++
Sbjct:    7 YETLYTGQKIPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQDLQLDYLDLYLMHWP--YAFKRGDQIFPQNPDGSVQYD-LTDYKDTWKAMEKLVKQGLTKAIGLSNFNKRQIDDI 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.109e-33
Identity = 80/176 (45.45%), Postives = 108/176 (61.36%), Query Frame = 2
Query:  191 SPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS--LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            S G  +  L  G KIP IGLGTW++      EAVK ALSVGYR++DCA  Y NE E+G+A  E    +  +KRED+F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD   P +  G+ R  + +  K  WKAME LV+ GL +AIG+SNF   QI ++
Sbjct:    2 SAGCDFVALYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPH--AFERGDNLFPKNPDGTMRYDYTD-YKDTWKAMEKLVEKGLAKAIGLSNFNSRQIDDV 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 6.136e-33
Identity = 79/177 (44.63%), Postives = 114/177 (64.41%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGF--GDATDPPSKSGS---ERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +++ VL  GAK+P +GLGTW++      EAVKTA+ +GYR+IDCAH+Y NE EVG AL E  K   +KRE++F+ S L+C+ +  + ++   + +L +L + YLDLYL+HWP    +GF  G    P   +G+       FL+     W+AMEGLVD GLV++IGVSNF   QI+ +
Sbjct:    2 ATHLVLYNGAKMPILGLGTWKSPPGQVTEAVKTAIDLGYRHIDCAHVYQNENEVGVALQEKLKEQVVKREELFIVSKLWCTSHDKSLVKGACQKTLNDLKLDYLDLYLIHWP----TGFKHGSEYFPLDAAGNVIPSDTDFLD----TWEAMEGLVDEGLVKSIGVSNFNHLQIERI 170          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 78/173 (45.09%), Postives = 111/173 (64.16%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKG--SLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S  +L+TG K+P IGLGTW++       A+K ALSVGYR+IDCA +YGNE E+GEAL E+     ++ RE++F+TS L+ + +    +E  VR +L +L + YLDLYLMHWP   A   GD   P +  G+ +       K+ WKA+E LV  GLV+A+G+SNF   QI ++
Sbjct:    3 ASSVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWP--YAFERGDNPFPKNADGTVKYD-STHYKETWKALEALVAKGLVKALGLSNFSSRQIDDV 172          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.045e-32
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDE-AFKGSL-KREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S  +L+TG K+P IGLGTW++       A+K ALSVGYR+IDCA +YGNE E+GEAL E    G L  RE++F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD+  P +  G+ R       K+ W+A+E LV  GLVRA+G+SNF   QI ++
Sbjct:    3 ASCILLHTGQKMPLIGLGTWKSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP--YAFERGDSPFPKNADGTIRYD-STHYKETWRALEALVAKGLVRALGLSNFNSRQIDDV 172          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32
Identity = 77/172 (44.77%), Postives = 109/172 (63.37%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGF--GDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            +S  +LN GAK+P +GLGTW++      EAVK A+ VGYR+IDCAH+Y NE EVG A+ E  +   +KRE++F+ S L+C+ +    ++   + +L +L + YLDLYL+HWP    +GF  G    P  +SG+      N L   W AME LVD GLV+AIG+SNF   Q++
Sbjct:    2 ASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWP----TGFKPGKEFFPLDESGNVVPSDTNIL-DTWAAMEELVDEGLVKAIGISNFNHLQVE 168          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32
Identity = 78/173 (45.09%), Postives = 110/173 (63.58%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF--KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S  +L+TG K+P IGLGTW++       A+K AL+VGYR+IDCA +YGNE+E+GEAL E      ++ RE++F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD   P +  G+ R       K  WKA+E LV  GLVRA+G+SNF   QI ++
Sbjct:    3 ASCVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP--YAFERGDNPFPKNADGTIRYD-ATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDV 172          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALD1_MOUSE (Aldose reductase-related protein 1 OS=Mus musculus GN=Akr1b7 PE=2 SV=4)

HSP 1 Score: 137.502 bits (345), Expect = 6.784e-32
Identity = 77/177 (43.50%), Postives = 113/177 (63.84%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGF--GDATDPPSKSGS---ERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +++  L+T AK+P +GLGTW++      EAVK A+  GYR+IDCA++Y NE EVGEA+ E  K  ++KRED+F+ S L+ +    + ++   + +L +L + YLDLYL+HWP+    GF  G+A  P    G     +  FL+    AW+AME LVD GLV+A+G+SNF   QI+ L
Sbjct:    2 ATFVELSTKAKMPLVGLGTWKSSPGQVKEAVKAAIDAGYRHIDCAYVYHNENEVGEAIQEKIKENAVKREDLFIVSKLWATFFEKSLVKKAFQNTLSDLKLDYLDLYLVHWPQ----GFQAGNALLPKDNKGKVLLSKSTFLD----AWEAMEELVDQGLVKALGISNFNHFQIERL 170          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
ALDR_PIG6.555e-3544.63Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
AK1A1_XENLA4.249e-3448.84Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
AK1A1_XENTR7.248e-3448.54Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
AK1A1_CHICK2.109e-3345.45Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
ALDR_RABIT6.136e-3344.63Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
AK1A1_RAT2.332e-3245.09Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_BOVIN3.045e-3246.24Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
ALDR_HUMAN3.977e-3244.77Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
AK1A1_PIG3.977e-3245.09Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
ALD1_MOUSE6.784e-3243.50Aldose reductase-related protein 1 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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