FC930389

Overview
NameFC930389
Unique NameFC930389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5076 contig Ccv1_Contig5076:182..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.161e-40
Identity = 76/160 (47.50%), Postives = 109/160 (68.12%), Query Frame = 2
Query:  251 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            +L  SKK    L P+ F++F L++++++SHN A + F LP  T  LGLPIGQHIS  G    G+EV++ YTP + D  +GHF+L+IK Y  G +S H     VG+++ ++GPKG F Y P  V++FGM AGG+GI PM+ +  AIL+NP  +TK+HL+YA
Sbjct:   37 FLQQSKKHTPVLKPDEFQKFPLIEKIRVSHNSAIYRFGLPKSTDRLGLPIGQHISI-GATIDGKEVVRSYTPISTDDQLGHFDLLIKTYENGNISRHVAGKNVGEHIEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILKNPEDKTKIHLVYA 195          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.065e-39
Identity = 79/158 (50.00%), Postives = 108/158 (68.35%), Query Frame = 2
Query:  257 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            Y SKK K  LD E  +EF LV +  L+HN A + F LP  T VLGLPIGQHIS +  +  G+++++ YTPT+LDSD VGHFEL+IK Y +G +S HF ++ +GD + V+GPKG + YQP      GM AGG+GI PM+ + ++I  N + +TKV L+Y
Sbjct:   25 YQSKKDKPVLDKEKLQEFPLVAKTVLTHNTAIYRFGLPKSTQVLGLPIGQHISVQA-NINGKDILRSYTPTSLDSDAVGHFELLIKSYEKGNISKHFAQLNIGDKIKVRGPKGFYHYQPNMNEEIGMIAGGTGIAPMYQIMKSIFANDSDKTKVSLVY 181          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_LODEL (NADH-cytochrome b5 reductase 1 OS=Lodderomyces elongisporus GN=CBR1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.848e-39
Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 2
Query:  263 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            SKK   +L P+ F++F L+ + Q+SHN A + F LP PT  L LPIGQHIS  G    G+EV++ YTP +L    GHF+L+IK Y  G +S H  E +VGD++ ++GPKG F Y P   ++ G+ AGG+GI PM+ +  AI+ NP  +TKVHL+YA
Sbjct:   47 SKKGSPALIPDKFQKFPLISKTQVSHNSAIYRFGLPNPTDTLNLPIGQHISI-GTIIDGKEVVRSYTPISLGDQQGHFDLLIKTYENGNISRHVAEKQVGDFVEIRGPKGFFTYTPNMKKSLGLIAGGTGIAPMYQIITAIMNNPEDKTKVHLLYA 201          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_PICST (NADH-cytochrome b5 reductase 1 OS=Pichia stipitis GN=CBR1 PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.644e-38
Identity = 74/160 (46.25%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  251 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            ++  SKK    L P+ F++F L+++ ++SHN + + F LP  T  LGLPIGQHIS  G    G+EV++ YTP + D ++G+F+L+IK Y  G +S H    +VG+Y+ ++GPKG F Y P  V++FGM AGG+GI PM+ +  AIL NP  +TK+ LIYA
Sbjct:   27 FVQQSKKNTPVLKPDTFQKFPLIEKTRVSHNSSVYRFGLPKSTDRLGLPIGQHISI-GATIGGKEVVRSYTPISTDDELGYFDLLIKTYENGNISKHVDSKKVGEYVEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILRNPADKTKISLIYA 185          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica GN=CBR1 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.933e-37
Identity = 79/163 (48.47%), Postives = 109/163 (66.87%), Query Frame = 2
Query:  251 YLYSSKKPKVSLDPEN--FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDS-DVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            Y +S+ KPK  L   +  FKEF L+++  LSHN A + F LP P+ VLGLPIGQH+S       G+EV++ YTPT+ D  D G+F+++IK YPQG +S +  E+ +GD + V+GPKG F Y  G V +FGM  GG+GITPM+ + R I  +P   TKV+L+YA
Sbjct:   31 YFFSNSKPKAVLQRGDTAFKEFPLIQKTVLSHNSAIYRFGLPRPSHVLGLPIGQHVSLSANIG-GKEVLRSYTPTSSDLYDKGYFDILIKTYPQGNISKYVSELAIGDTMKVRGPKGNFVYNHGLVESFGMVCGGTGITPMYQILRHIAADPADNTKVNLVYA 192          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_LACBS (NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor (strain S238N-H82) GN=MCR1.1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.306e-37
Identity = 77/159 (48.43%), Postives = 105/159 (66.04%), Query Frame = 2
Query:  254 LYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            +++S +PK  LDP  +KEF L K+ Q+S N A +TF+LP    VLGLPIGQHIS    D  G+ +++ YTP +  +  G FEL+IK Y +G +S H   +++GD L VKGPKG F+Y PG     GM AGG+G+ PM  + RAIL+NP  +T + LIYA
Sbjct:   52 VFNSTRPK-PLDPSIWKEFPLQKKNQVSPNTAIYTFKLPHAEDVLGLPIGQHISVSA-DINGKNIVRSYTPISRQNARGRFELIIKTYEKGNISRHVASLKIGDTLRVKGPKGNFKYTPGLTAHLGMIAGGTGLAPMIQIVRAILQNPPDRTNITLIYA 208          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.593e-37
Identity = 71/156 (45.51%), Postives = 104/156 (66.67%), Query Frame = 2
Query:  263 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            S+K    L P +F++F L+++ ++SHN   + F LP  T  LGLPIGQHI+  G     +EV++ YTP + D ++G+F+L+IK Y  G +S H    ++G+ + ++GPKG F Y PG V +FGM AGG+GITPM+ +  AIL NP  +TKV L+YA
Sbjct:   31 SRKNAPVLKPNDFQKFPLIEKTRVSHNTCVYRFGLPRSTDRLGLPIGQHIAI-GATINDKEVVRSYTPISTDDELGYFDLLIKAYENGNISRHVESKKIGETIDIRGPKGFFTYTPGMVESFGMIAGGTGITPMYQILTAILRNPEDKTKVSLVYA 185          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_PICGU (NADH-cytochrome b5 reductase 1 OS=Pichia guilliermondii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.253e-36
Identity = 75/156 (48.08%), Postives = 103/156 (66.03%), Query Frame = 2
Query:  263 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            +KK    L P+ F++F L+++ +LSHN   + F LP  T  LGLPIGQHIS  G    G+EV++ YTP + D ++G+F+L+IK Y QG +S H     VGD++ V+GPKG F Y P  V   GM AGG+GI PM+ V  AIL NP+ +TK+ L+YA
Sbjct:   31 NKKNGPVLKPDVFQKFPLIEKTRLSHNTCIYRFGLPKSTDRLGLPIGQHISI-GATINGKEVVRSYTPISRDDELGYFDLLIKTYEQGNISRHVDSKSVGDHIEVRGPKGFFTYTPNMVEHLGMIAGGTGIAPMYQVLTAILTNPDDKTKISLVYA 185          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_USTMA (NADH-cytochrome b5 reductase 1 OS=Ustilago maydis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 72/158 (45.57%), Postives = 109/158 (68.99%), Query Frame = 2
Query:  257 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            + S+K K  L+P  +++++L+++ +LS N A + F+LP   ++LGLPIGQHIS +  +  G+ V++ YTPT+ D D G F+LV+K Y QG +S +   M++GD L+VKGPKG+ RY PG  R  GM AGG+G+TP   + RA L+NP  +T++  IYA
Sbjct:   69 FDSQKIKPVLNPTQWQQYRLMEKQKLSDNTALYRFKLPRSNNILGLPIGQHISVQA-NMGGKTVVRSYTPTSSDDDHGFFDLVVKSYEQGNVSKYIGSMKIGDLLSVKGPKGQMRYAPGLSRHIGMIAGGTGLTPCLQIIRAALKNPADKTQIDFIYA 225          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 71/154 (46.10%), Postives = 108/154 (70.13%), Query Frame = 2
Query:  266 KKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            K+ + +LDP+ +++F+L ++  ++HN   F F LP    +LGLPIGQHIS R     G+EV +PYTP + D + G+F+L+IK+Y +G MS +   M +GD + VKGPKG+F YQP   ++ GM AGG+GITPM  V +AIL+NP+ +T++ L++
Sbjct:   43 KQVEKALDPQEYRKFQLKEKFIVNHNTRIFRFALPNEDDILGLPIGQHISLRAVVG-GKEVYRPYTPISSDEERGYFDLLIKVYEKGAMSGYVDNMFIGDSIEVKGPKGKFNYQPNMRKSIGMLAGGTGITPMLQVIKAILKNPSDKTEISLVF 195          
The following BLAST results are available for this feature:
BLAST of FC930389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
NCB5R_CANAL4.161e-4047.50NADH-cytochrome b5 reductase 1 OS=Candida albicans... [more]
NCB5R_KLULA2.065e-3950.00NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
NCB5R_LODEL7.848e-3948.08NADH-cytochrome b5 reductase 1 OS=Lodderomyces elo... [more]
NCB5R_PICST6.644e-3846.25NADH-cytochrome b5 reductase 1 OS=Pichia stipitis ... [more]
NCB5R_YARLI1.933e-3748.47NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolyt... [more]
NCB5R_LACBS4.306e-3748.43NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor... [more]
NCB5R_DEBHA9.593e-3745.51NADH-cytochrome b5 reductase 1 OS=Debaryomyces han... [more]
NCB5R_PICGU1.253e-3648.08NADH-cytochrome b5 reductase 1 OS=Pichia guillierm... [more]
NCB5R_USTMA1.636e-3645.57NADH-cytochrome b5 reductase 1 OS=Ustilago maydis ... [more]
NCB5R_DICDI1.636e-3646.10NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionC34007A08EF PostHarvC1 Citrus clementina cDNA clone C34007A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930389 ID=FC930389; Name=FC930389; organism=Citrus clementina; type=EST; length=730bp
AGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTCCCACCCATT
TACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATTTATTCTTTA
TATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAGCT
TTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCAGC
TTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTTGGTGCTGCT
TACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAATTT
CAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGCAA
AGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAATT
GGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTTAT
TAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGAAT
TGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTGAG
ATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTCAG
GTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTCTG
GCATCACTCCAATGTTTCCAGTTACTAGAGCCATATTAGAGAACCCAAAT
NGACAGACAAAGGTGCACCTCATTTATGCC
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