FC930409

Overview
NameFC930409
Unique NameFC930409
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930409 vs. ExPASy Swiss-Prot
Match: Y4966_ARATH (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.493e-37
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 3 
Query:  297 SYLWRKYADYVYTKWERTLIWDMIEPYRRPKSFTPLVSIYVAAFYTGVIAAAINEQLYKEKYWEDHPGEAVPLMRPTFYGGPWKVYKGDTL 569
            S LWRKYADY Y K+ER  +W+MIEPYRRPK+FT L++IYVAAFYTGVI AA+ EQLYKEK+WE+HPG+ VPLM+P FY GPW+VY+G+ +
Sbjct:    6 SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKEKFWEEHPGKTVPLMKPVFYRGPWRVYRGEAI 96
The following BLAST results are available for this feature:
BLAST of FC930409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4966_ARATH5.493e-3770.33Uncharacterized protein At4g29660 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC34007C05EF PostHarvC1 Citrus clementina cDNA clone C34007C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930409 ID=FC930409; Name=FC930409; organism=Citrus clementina; type=EST; length=724bp
GGTGAAATTGAAATATAAAAGTGACATCAGAAACACAAACGCGAAGAGAG
AGCAGCGAACTCCAAAGCGCTCCGAAGTCCAAACGAAATCCTGCAGCGTG
AATTGACACCCGCTGCTGAGTTGCGCCGCCGCTTCACGGCTGTCACCACT
GACCTTCAAAAGCATTGGAAGCTTCATTTACGGCAGACAGTGGATAATTT
TGGCAGCTTAGGTGGCGGGACATAGGGTTTATTGAGGGGCCGTCCAAGGG
CAGTGTGAGTGGCAGTGGAAGTCAAAGGGGGAGGTTGGAAATGGCGAGTT
ACTTATGGAGAAAATACGCGGACTATGTGTACACAAAGTGGGAAAGAACA
CTAATTTGGGACATGATAGAGCCCTACAGAAGACCCAAATCCTTCACACC
CCTTGTCAGTATCTATGTTGCTGCTTTCTACACTGGTGTGATTGCCGCTG
CTATTAACGAGCAACTCTACAAGGAGAAGTATTGGGAAGATCACCCTGGT
GAAGCTGTGCCGCTCATGCGGCCAACATTTTATGGTGGTCCCTGGAAGGT
TTACAAGGGGGATACCCTGCCGCAAAATATGTGAATTGGAGTCGTGTTGA
AGCTACTTCCTTTCTACTTGTGTTTATTGTACAAAGGTCACAGGTTTTGG
TGGTACGTAGTGATCAAATATTATTCTTGGTAAAAATAACTTTCANGTCA
AATGATGCATAGCCAGTGAGAGCG
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