FC930430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: SF3_HELAN (Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59 Identity = 112/189 (59.26%), Postives = 131/189 (69.31%), Query Frame = 1 Query: 139 MASFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGA**SWCI*DIY*CYILLFKFIHGFLYFLGTPKTVRVERSADQVTNS--RVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 699 M SF GTTQKC CEKTVYLVD+L A+ +VYHKACFRCHHC TLKLSN+ SF+GV+YC+ HFDQLFK TGSL+KSF+ GTPK + ER+ Q T S R+SS F GT+DKC AC K VYPIE+V VDGT+YH+ACF+C HGGC ISPSNY+AHE RLYC+ Sbjct: 1 MKSFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQLFKRTGSLEKSFD-----------------------------GTPK-FKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCK 159 HSP 2 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 1 Query: 148 FAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGS 354 F GT KC AC K VY ++++ D YH+ACF+C H T+ SNY + EG LYCK H QLFK G+ Sbjct: 103 FEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGN 171
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: XIRP2_MOUSE (Xin actin-binding repeat-containing protein 2 OS=Mus musculus GN=Xirp2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 133 RDMASFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSF 369 ++ ++F + C C+KTVY ++ L AD + +HK+CFRCHHC L L NY S G +YCKPHF QLFK G+ D+ F Sbjct: 3245 QEESAFLSDKEICIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSKGNYDEGF 3323
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: CSRP3_MOUSE (Cysteine and glycine-rich protein 3 OS=Mus musculus GN=Csrp3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16 Identity = 54/182 (29.67%), Postives = 81/182 (44.51%), Query Frame = 1 Query: 154 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGA**SWCI*DIY*CYILLFKFIHGFLYFLGTPKTVRVERSADQVTNSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 699 G KC ACEKTVY +++ + + +HK CF C C+ L + + E +YCK + + + G G + H L F +PK R +++ S+ S+ F G +KC C K+VY EKV G +HK CFRC G + +N + LYC+ Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGFGQGAGC-------------LSTDTGEHLGLQFQQSPKPARAATTSNP---SKFSAKF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK 169
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: CSRP3_HUMAN (Cysteine and glycine-rich protein 3 OS=Homo sapiens GN=CSRP3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 56/184 (30.43%), Postives = 78/184 (42.39%), Query Frame = 1 Query: 154 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGA**SWCI*DIY*CYILLFKFIHGFLYFLGTPKTVRVERSADQVTNSRVSSMFA--GTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 699 G KC ACEKTVY +++ + + +HK CF C C+ L + + E +YCK + + + G G + H L F +PK R VT S S A G +KC C K+VY EKV G +HK CFRC G + +N + LYC+ Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGC-------------LSTDTGEHLGLQFQQSPKPAR------SVTTSNPSKFTAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK 169
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: CSRP3_BOVIN (Cysteine and glycine-rich protein 3 OS=Bos taurus GN=CSRP3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 56/184 (30.43%), Postives = 78/184 (42.39%), Query Frame = 1 Query: 154 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGA**SWCI*DIY*CYILLFKFIHGFLYFLGTPKTVRVERSADQVTNSRVSSMFA--GTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 699 G KC ACEKTVY +++ + + +HK CF C C+ L + + E +YCK + + + G G + H L F +PK R T S S FA G +KC C K+VY EKV G +HK CFRC G + +N + LYC+ Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGC-------------LSTDTGEHLGLQFQQSPKQAR------SATTSSNPSKFAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK 169
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: LIMA1_HUMAN (LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 130 PRDMASF-AGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSF 369 P+ M F A + C C+KTVY +++L A+ +V+H +CFRC +C L L Y S G +YCKPHF+QLFK G+ D+ F Sbjct: 376 PKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGF 456
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: LIMD2_RAT (LIM domain-containing protein 2 OS=Rattus norvegicus GN=Limd2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16 Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 121 VEDPRDMASFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSF 369 V+ + + A + C AC+KTVY +++L AD ++H +CF C HC L L +Y + G YCKPHF QLFK G+ D+ F Sbjct: 25 VQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCKPHFQQLFKSKGNYDEGF 107
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: LIMD2_HUMAN (LIM domain-containing protein 2 OS=Homo sapiens GN=LIMD2 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16 Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 121 VEDPRDMASFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSF 369 V+ + + A + C AC+KTVY +++L AD ++H +CF C HC L L +Y + G YCKPHF QLFK G+ D+ F Sbjct: 24 VQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGF 106
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: LIMD2_BOVIN (LIM domain-containing protein 2 OS=Bos taurus GN=LIMD2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16 Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 121 VEDPRDMASFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSF 369 V+ + + A + C AC+KTVY +++L AD ++H +CF C HC L L +Y + G YCKPHF QLFK G+ D+ F Sbjct: 25 VQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHSSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGF 107
BLAST of FC930430 vs. ExPASy Swiss-Prot
Match: LIMA1_MOUSE (LIM domain and actin-binding protein 1 OS=Mus musculus GN=Lima1 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 151 AGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSF 369 A + C C+KTVY +++L A+ +V+H +CFRC +C L L Y S G +YCKPHF+QLFK G+ D+ F Sbjct: 382 APAKESCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGF 454 The following BLAST results are available for this feature:
BLAST of FC930430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930430 ID=FC930430; Name=FC930430; organism=Citrus clementina; type=EST; length=701bpback to top |