FC930432

Overview
NameFC930432
Unique NameFC930432
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15152 contig Ccv1_Contig15152:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC930432 vs. ExPASy Swiss-Prot
Match: ANTA_GENTR (Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 73/223 (32.74%), Postives = 118/223 (52.91%), Query Frame = 1 
Query:    1 TPMMIPDDDELICLPLTLFDTYWLKFLPVERLFFYEVADLTWDLFDSEILPKLKHSLSLTLGLHYLPLAGHMMWPEHAAKPAIYYFLPGQDQKEDIVNGVTVAVAESEGLDFDVLSGDGIRQAVEFRAL---TPQL--SISDNKA-EVVSIQITLFPKQGFCIGISNHHAFFDGRSTMMFIKSWAYLCKQYLDMENASSQQQQTTICLPSELIPSFDRAFINE 651
            TP     D EL  LP+T FD  WL    ++ L FY+         D+ ++P LK SLSLTL  HY+PL+G+++ P  + +      +P      D  + +T+ VAES+  DFD L G  +  + +   L    P++  ++ D K   +V++Q+T+FP +G  + ++ HH+  D +S +MFI +WAY+ K   D +            L + L+PSFDR+ I +
Sbjct:   16 TPPSDTTDVEL-SLPVTFFDIPWLHLNKMQSLLFYDFPYPRTHFLDT-VIPNLKASLSLTLK-HYVPLSGNLLMPIKSGE------MPKFQYSRDEGDSITLIVAESDQ-DFDYLKGHQLVDSNDLHGLFYVMPRVIRTMQDYKVIPLVAVQVTVFPNRGIAVALTAHHSIADAKSFVMFINAWAYINKFGKDAD-----------LLSANLLPSFDRSIIKD 217
The following BLAST results are available for this feature:
BLAST of FC930432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANTA_GENTR1.064e-2132.74Anthocyanin 5-aromatic acyltransferase OS=Gentiana... [more]
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Properties
Property NameValue
Genbank descriptionC34007E04EF PostHarvC1 Citrus clementina cDNA clone C34007E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930432 ID=FC930432; Name=FC930432; organism=Citrus clementina; type=EST; length=700bp
ACCCCCATGATGATCCCCGATGATGATGAGTTAATTTGTTTGCCTTTAAC
CTTGTTCGACACATACTGGCTCAAGTTTCTTCCTGTAGAACGCCTCTTCT
TCTATGAGGTGGCTGACTTGACTTGGGATTTATTCGACTCAGAAATCCTG
CCAAAGCTGAAGCACTCGCTTTCCCTCACTCTCGGCCTTCATTATCTCCC
TCTTGCCGGTCACATGATGTGGCCGGAACATGCTGCAAAGCCAGCCATCT
ACTACTTCTTGCCCGGTCAGGATCAGAAAGAAGATATTGTTAACGGTGTC
ACAGTGGCGGTGGCCGAGTCCGAGGGCTTGGACTTCGATGTCCTCTCTGG
CGACGGAATCCGTCAAGCTGTTGAATTTCGAGCTCTGACACCCCAGTTGT
CGATATCAGACAACAAAGCGGAGGTAGTCTCCATCCAAATAACTTTGTTT
CCAAAGCAGGGCTTTTGCATCGGGATTTCAAATCACCATGCATTTTTTGA
TGGCAGGAGCACTATGATGTTTATCAAATCTTGGGCTTATTTATGCAAAC
AATATTTAGATATGGAAAATGCAAGTAGTCAACAACAACAGACTACCATA
TGTCTTCCATCGGAACTGATTCCGTCTTTTGACCGTGCGTTCATCAACGA
GAACGACCCTAAAGGTTTTGACTTGGTGTACGTCAACAACTGGTTATCTT
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