FC930467

Overview
NameFC930467
Unique NameFC930467
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930467_ssr35 microsatellite FC930467_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.787e-101
Identity = 180/204 (88.24%), Postives = 192/204 (94.12%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            MAITI +V+ARQIFDSRGNPTVE D+  SDGH+ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN+IIGPAL GKDPTEQTA+DN+MVQ+LDGTVNEWGWC QKLGANAILAVSLA+CKAGAHVK IPLYKHIA L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F EAMKMG EVYHHLK+VIK+
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADIKLSDGHLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNSIIGPALIGKDPTEQTALDNFMVQELDGTVNEWGWCKQKLGANAILAVSLALCKAGAHVKGIPLYKHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKK 204          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.281e-99
Identity = 178/204 (87.25%), Postives = 189/204 (92.65%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDGTVNEWGWC QKLGANAILAVSLA+CKAGAHVK IPLY+HIA L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F EAMKMG EVYHHLK+VIK+
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYEHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKK 204          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.185e-99
Identity = 177/204 (86.76%), Postives = 188/204 (92.16%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVP GASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDGTVNEWGWC QKLGANAILAVSLA+CKAGAHVK IPLYKH+A L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F EAMKMG EVYHHLK+VIK+
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPRGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYKHVANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKK 204          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 2.953e-96
Identity = 175/204 (85.78%), Postives = 185/204 (90.69%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            MA+TIT VKARQIFDSRGNPTVEVDV  SDG  AR AVPSGASTGIYEALELRDGGSDYLGKGV KAVSNVN IIGPA+ GKDPTEQ  IDN+MVQQLDGT NEWGWC QKLGANAILAVSLA+CKAGA VKKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GAS F EAMKMGVEVYH+LK++IK+
Sbjct:    1 MAVTITWVKARQIFDSRGNPTVEVDVGLSDGSYARGAVPSGASTGIYEALELRDGGSDYLGKGVLKAVSNVNNIIGPAIVGKDPTEQVEIDNFMVQQLDGTSNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGVEVYHNLKSIIKK 204          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 1.465e-95
Identity = 172/204 (84.31%), Postives = 186/204 (91.18%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGS YLGKGVSKAV+NVN++IGPAL GKDPT QT IDN+MVQQLDGT NEWGWC QKLGANAILAVSLA+CKAGA +K+IPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GA+ F EAMKMGVEVYHHLK+VIK+
Sbjct:    1 MAATIQSVKARQIFDSRGNPTVEVDVFCSDGTFARAAVPSGASTGVYEALELRDGGSYYLGKGVSKAVNNVNSVIGPALIGKDPTAQTEIDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAVCKAGASIKRIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKEAMKMGVEVYHHLKSVIKK 204          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 7.273e-95
Identity = 168/202 (83.17%), Postives = 183/202 (90.59%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            +TI  VKARQI+DSRGNPTVE D+   DG  ARAAVPSGASTG+YEALELRDGG DY+GKGV KAV NVN IIGPAL GKDPT+QTAIDN+MVQQLDGTVNEWGWC QKLGANAILAVSLA+CKAGA VKKIPLY+HIAE++GNKN+VLPVPAFNVINGGSHAGNKLAMQEFMILP GAS F EAMKMG EVYH+LK+VIK+
Sbjct:    2 VTIKCVKARQIYDSRGNPTVEADIHLDDGTYARAAVPSGASTGVYEALELRDGGKDYMGKGVYKAVKNVNEIIGPALVGKDPTQQTAIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAQVKKIPLYQHIAEIAGNKNMVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGSEVYHNLKSVIKK 203          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 9.499e-95
Identity = 171/204 (83.82%), Postives = 184/204 (90.20%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGSDYLGKGVSKAV NVN++I PAL GKDPT Q  +DN+MVQQLDGT NEWGWC QKLGANAILAVSLAICKAGA +KKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GA+ F EAMKMGVEVYH+LK+VIK+
Sbjct:    1 MAATIVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVSKAVDNVNSVIAPALIGKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKEAMKMGVEVYHNLKSVIKK 204          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.620e-94
Identity = 169/201 (84.08%), Postives = 185/201 (92.04%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            TI ++KARQIFDSRGNPTVEVDV  S+G  ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV+NVN+IIGPAL GKDPT+QT +DN+MV QLDGT NEWGWC +KLGANAILAVSLA+CKAGA V+ +PLYKHIA+L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F EAMKMG EVYHHLKAVIK+
Sbjct:    3 TIKSIKARQIFDSRGNPTVEVDVHISNGVFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVNNVNSIIGPALVGKDPTDQTGLDNFMVHQLDGTQNEWGWCKEKLGANAILAVSLAVCKAGAAVRNVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFKEAMKMGCEVYHHLKAVIKK 203          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.714e-94
Identity = 173/201 (86.07%), Postives = 184/201 (91.54%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAID-NYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            IT +KARQIFDSRGNPTVE +VTT++G V+RAAVPSGASTG+YEALELRDGGSDYLGKGV KAV NVN IIGPAL GKD TEQTAID ++M QQLDGTVNEWGWC QKLGANAILAVSLA+CKAGA VKKIPLYKHIA L+GN  LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F EAMKMGVEVYHHLKAVIK+
Sbjct:    4 ITHIKARQIFDSRGNPTVEAEVTTANGVVSRAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVDNVNKIIGPALIGKDATEQTAIDIDFMFQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGASVKKIPLYKHIANLAGNPKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKK 204          
BLAST of FC930467 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.791e-93
Identity = 170/201 (84.58%), Postives = 181/201 (90.05%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCNQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFXEAMKMGVEVYHHLKAVIKR 694
            TIT VKARQIFDSRGNPTVEVD+ TS+G    AAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+QTAIDN+MV +LDGT NEWGWC QKLGANAILAVSLA+CKAGA V  IPLYKHIA L+GN  +VLPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F EAMKMGVEVYHHLK+VIK+
Sbjct:    3 TITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVGNVNNIIGPALIGKDPTQQTAIDNFMVHELDGTQNEWGWCKQKLGANAILAVSLAVCKAGAVVSGIPLYKHIANLAGNPKIVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAASFKEAMKMGVEVYHHLKSVIKK 203          
The following BLAST results are available for this feature:
BLAST of FC930467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RICCO1.787e-10188.24Enolase OS=Ricinus communis PE=2 SV=1[more]
ENO1_HEVBR1.281e-9987.25Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1[more]
ENO2_HEVBR2.185e-9986.76Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1[more]
ENO1_MAIZE2.953e-9685.78Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1[more]
ENO2_MAIZE1.465e-9584.31Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1[more]
ENO_MESCR7.273e-9583.17Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P... [more]
ENO_ORYSJ9.499e-9583.82Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE... [more]
ENO_SOLLC1.620e-9484.08Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1[more]
ENO_ALNGL4.714e-9486.07Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1[more]
ENO_ARATH1.791e-9384.58Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34007H04EF PostHarvC1 Citrus clementina cDNA clone C34007H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930467 ID=FC930467; Name=FC930467; organism=Citrus clementina; type=EST; length=703bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAACCAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTCNAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAAATACG
GCC
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