FC930470

Overview
NameFC930470
Unique NameFC930470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9358 contig Ccv1_Contig9358:1..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.197e-73
Identity = 130/178 (73.03%), Postives = 152/178 (85.39%), Query Frame = 2
Query:  143 GVQAARFNRRDSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            G+ A+R N  +  IL+P+E+             TRWAVLVAGS G+ NYRHQADVCHAYQLLRKGGLKEE+I+VFMYDDIA +ELNPRPGVIINHPQGE++Y GVPKDYTGEHVTA+NLYAVLLGD+ AV+GGSGKVV+SK ND IF++YSDHGGPGVLGMPN+PY+YAM+FI+VLKK
Sbjct:   28 GLLASRLNPFEPGILMPTEEAEPVQVDDDDQLGTRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPKDYTGEHVTAKNLYAVLLGDKSAVQGGSGKVVDSKPNDRIFLYYSDHGGPGVLGMPNLPYLYAMDFIEVLKK 205          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.879e-69
Identity = 128/177 (72.32%), Postives = 147/177 (83.05%), Query Frame = 2
Query:  152 AARFNRR--DSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            AAR NR+  DS I LP+E              TRWAVLVAGS+GY NYRHQADVCHAYQLL KGGLKEE+IVVFMYDDIA +ELNPR GVIINHP+GE+LY GVPKDYTG++VT +NL+AV+LGD+  +KGGSGKV+NSK  D IFI+YSDHGGPG+LGMPNMPY+YAM+FIDVLKK
Sbjct:   31 AARPNRKEWDSVIKLPTEP----VDADSDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPKDYTGDNVTTENLFAVILGDKSKLKGGSGKVINSKPEDRIFIYYSDHGGPGILGMPNMPYLYAMDFIDVLKK 203          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.515e-68
Identity = 129/177 (72.88%), Postives = 143/177 (80.79%), Query Frame = 2
Query:  152 AARFNRR--DSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            AAR NRR  DS I LP+E              TRWAVLVAGS+GY NYRHQADVCHAYQLL KGG+KEE+IVVFMYDDIA + +NPRPGVIINHPQG ++Y GVPKDYTGE VT +NLYAV+LGD+  VKGGSGKV+NS   D IFIFYSDHGGPGVLGMPN P+VYAM+FIDVLKK
Sbjct:   14 AARLNRREWDSVIQLPTEP-------VDDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPKDYTGEDVTPENLYAVILGDKSKVKGGSGKVINSNPEDRIFIFYSDHGGPGVLGMPNAPFVYAMDFIDVLKK 183          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.978e-68
Identity = 124/177 (70.06%), Postives = 143/177 (80.79%), Query Frame = 2
Query:  146 VQAARFNRRDSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            +Q      +DS I LP+++             TRWAVLVAGS+GY NYRHQADVCHAYQLL KGG+KEE+IVVFMYDDIA HELNPRPGVIIN+PQG ++Y GVPKDYTGE VT+ N +AVLLGD+  VKGGSGKV+NSK  D IF++YSDHGGPGVLGMPNMPY+YAM+FIDVLKK
Sbjct:   29 IQGTNGKEQDSVIKLPTQE----VDAESDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPKDYTGESVTSHNFFAVLLGDKSKVKGGSGKVINSKPEDRIFVYYSDHGGPGVLGMPNMPYLYAMDFIDVLKK 201          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 9.188e-66
Identity = 120/177 (67.80%), Postives = 139/177 (78.53%), Query Frame = 2
Query:  146 VQAARFNRRDSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            V A    R +  IL+P+E +            TRWAVLVAGSSGY NYRHQADVCHAYQ+LRKGGLKEE+IVV MYDDIA H LNPRPG +INHP G+++Y GVPKDYTG  VTA N YAVLLGD+KAVKGGSGKV+ SK ND IF++Y+DHGGPGVLGMPN P++YA +FI+ LKK
Sbjct:   19 VHAESRGRFEPKILMPTE-EANPADQDEDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGSSVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVYYADHGGPGVLGMPNTPHIYAADFIETLKK 194          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 5.217e-61
Identity = 111/145 (76.55%), Postives = 124/145 (85.52%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            TRWAVLVAGSSGY NYRHQAD+CHAYQLLRKGGLKEE+IVVFMYDDIA +  NPRPG IIN P G+++Y GVPKDYTG+ V   NL+AV+LGD+ AVKGGSGKVV+S  ND IFIFYSDHGGPGVLGMP  PY+YA +  DVLKK
Sbjct:   58 TRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSPYLYANDLNDVLKK 202          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.983e-60
Identity = 107/145 (73.79%), Postives = 126/145 (86.90%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            TRWAVL+AGS+G+ NYRHQAD+CHAYQLLRKGGLK+E+I+VFMYDDIA +E NPRPGVIINHP G+++Y GVPKDYTGE VT +  +AV+LG++ A+ GGSGKVV+S  ND IFIFYSDHGGPGVLGMP   Y+YA E IDVLKK
Sbjct:   59 TRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKK 203          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59
Identity = 112/165 (67.88%), Postives = 129/165 (78.18%), Query Frame = 2
Query:  182 ILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            I LPS               T+WAVLVAGSSGY NYRHQADVCHAYQLL+KGG+KEE+IVVFMYDDIA +E NPRPGVIIN P GE++Y+GVPKDYTG+ V   NL AV+LG++ A+KGGSGKVV+S  ND IFI+YSDHGGPGVLGMP  P +YA +  DVLKK
Sbjct:   23 IKLPSLASKFFRPTENDDDSTKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPNLYANDLNDVLKK 187          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.421e-58
Identity = 106/145 (73.10%), Postives = 119/145 (82.07%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            TRWA+L AGSSGY NYRHQAD+CHAYQLLRKGGLK+E+I+VFMYDDIA +  NPR GVIIN P G+ +Y GVPKDYTGE VTA N YA LLGD+  + GGSGKVVNS  ND IFIFYSDHGGPGVLG P  PY+YA +  +VLKK
Sbjct:   48 TRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGPGVLGSPAGPYIYASDLNEVLKK 192          
BLAST of FC930470 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.969e-57
Identity = 102/145 (70.34%), Postives = 122/145 (84.14%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDGIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKK 676
            TRWA+L+AGS+GY NYRHQ+DVCHAYQLLRKGG KEE+I+VFMYDDIA +E NPRPGVIIN P G+++Y GVPKDYTG  V A N YA LLG++ A+ GGSGKVV+S  ND IF++Y+DHGGPGVLGMP  PY+YA +  +VLKK
Sbjct:   55 TRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPVGPYLYASDLNEVLKK 199          
The following BLAST results are available for this feature:
BLAST of FC930470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
VPE_RICCO1.197e-7373.03Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN8.879e-6972.32Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
LEGU_CANEN1.515e-6872.88Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE2_PHAVU1.978e-6870.06Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH9.188e-6667.80Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
VPEG_ARATH5.217e-6176.55Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_CITSI1.983e-6073.79Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEA_ARATH1.678e-5967.88Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE1_PHAVU1.421e-5873.10Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA5.969e-5770.34Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34007H07EF PostHarvC1 Citrus clementina cDNA clone C34007H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930470 ID=FC930470; Name=FC930470; organism=Citrus clementina; type=EST; length=702bp
GACTCTCCCTCTTTTTGTGCTGTTTCTTGATTGCTTCTTCATCACTAATT
TTCTCAATTTTTTCCACGCACTCTCTATGGCCACTGCCCATCATCGCTCT
GTATTCTTTTTGCTAGTACTAGTACTGGTTCTTTTTACAGGAGGAGTTCA
AGCTGCACGGTTCAACCGAAGGGACTCAGCAATCCTGTTGCCTTCTGAGA
AGCAAGAACCGCCGGCGGAGGAAGGTGGTGAGCCTGTTGGCACTAGATGG
GCGGTTCTTGTGGCTGGATCATCTGGCTATGCAAATTACAGGCATCAGGC
CGATGTGTGCCATGCATATCAGTTGCTGAGGAAAGGTGGGTTGAAAGAAG
AGCACATAGTGGTGTTCATGTACGACGACATAGCCATGCATGAGCTTAAT
CCCAGGCCTGGTGTGATCATCAACCATCCACAAGGTGAAAATCTTTATGA
CGGTGTGCCGAAGGATTATACTGGCGAGCATGTGACTGCTCAGAATCTGT
ATGCCGTACTTCTTGGTGACAGGAAAGCTGTAAAAGGTGGAAGTGGCAAG
GTCGTGAATAGCAAGGCCAATGACGGGATCTTTATATTCTACTCTGATCA
TGGAGGCCCTGGAGTTCTTGGGATGCCAAATATGCCTTATGTGTATGCCA
TGGAATTCATTGATGTCTTGAAGAAGAACACGCTGCGAAGAGCTATAAAG
GG
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