FC930473

Overview
NameFC930473
Unique NameFC930473
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14655 contig Ccv1_Contig14655:288..1024. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.163e-90
Identity = 166/226 (73.45%), Postives = 188/226 (83.19%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQPNFRL 692
            GV  + GD+ +HESLVKAIKQVDVVISTVGH L+ADQVK+IAAIKEAGNVKRFFPSEFGNDVDRVH AVEP K+ ++ KA IRR VEAEGIP+TYV ++FF GY LPNL QPGA  PP DKVVI G GN KAVFNKE+DIGTYTI AVDDP+TLNK  YI+PP NI + N+LVSLWE+K GK LE+ YV EEQ+LKNIQEA+ P NV LSIYH+AFVKG   NF +
Sbjct:   56 GVTFVHGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEI 280          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 2.056e-81
Identity = 150/231 (64.94%), Postives = 176/231 (76.19%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQ--PGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKG-----VQPNF 686
            GV I+ GD+ +HESLVKAIKQVDVVISTVG   I DQ KII+AIKEAGNVKRF PSEFG DVDR   AVEP KS +  K  IRR +EAEGIPYTY  +  F GY+LP L+Q  PG T+PPRDKV I GDGN KAV NKE+DI  YTIKAVDDPRTLNK  YI+P  N  S N++V+LWE+KIGK+LEK ++ EEQLLK+IQE+  P NV+LSI H+ FV G     ++P+F
Sbjct:   57 GVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGDTNISIEPSF 286          

HSP 2 Score: 37.7354 bits (86), Expect = 2.056e-81
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 2
Query:  677 TKLQIEPSFGVEASQLYPDV 736
            T + IEPSFGVEAS+LYPDV
Sbjct:  278 TNISIEPSFGVEASELYPDV 297          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.720e-74
Identity = 135/219 (61.64%), Postives = 172/219 (78.54%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKG 671
            GVI+++GD+ +HE+LVKAIKQVD+VI   G  LI DQVKII AIKEAGNVK+FFPSEFG DVDR H AVEP +  ++ KA+IRR +EAEG+PYTY+  + F GYFL NL Q   T PPRDKVVI GDGN K  +  E D+GT+TI+A +DP TLNK  +I+ P N  + N++++LWE+KIGKTLEK YVSEEQ+LK+IQE++ PHN +L++YHS  +KG
Sbjct:   67 GVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG 284          

HSP 2 Score: 25.0238 bits (53), Expect = 1.720e-74
Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  686 QIEPSFGVEASQLYPDV 736
            +I+P+  +EAS+ YPDV
Sbjct:  289 EIDPAKDIEASEAYPDV 305          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 2.925e-74
Identity = 138/219 (63.01%), Postives = 171/219 (78.08%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKG 671
            GVI+++GD+ +HE+LVKAIKQVD VI T G  LI DQVKII AIKEAGNVKRFFPSEFG DVDR H AV+P +  +D KA+IRR VEAEG+PYTY+  + F GYFL NL Q  AT PPRDKV+I GDGN K  +  E D+GTYTI+A +DPRTLNK  +I+ P N  + N++VSLWE+KIGKTLEK Y+SEE++LK+I  +  PHN +L++YHS  +KG
Sbjct:   67 GVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKG 284          

HSP 2 Score: 22.7126 bits (47), Expect = 2.925e-74
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  686 QIEPSFGVEASQLYPDV 736
            +I+P+   EA  LYPDV
Sbjct:  289 EIDPAKDAEAYDLYPDV 305          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.572e-74
Identity = 142/226 (62.83%), Postives = 168/226 (74.34%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQPNFRL 692
            GV ++ GD+ N ESL+KAIKQVDVVISTVG     DQV II AIKEAGN+KRF PSEFG DVD    A+EP  S + +K  IRR +EAEGIPYTYV   +F  +FLPNL Q  A  PPRDKVVIFGDGNPKA++ KE+DI TYTI+AVDDPRTLNK  +++PP NI SFN++VSLWE KIGKTLEK Y+SEE +L+ +QE   P    L+I HS FV G   NF +
Sbjct:   58 GVTLLFGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEV 282          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.165e-73
Identity = 134/219 (61.19%), Postives = 170/219 (77.63%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKG 671
            GVI+++GD+ +HE+LV AIKQVD VI   G  LI DQVK+I AIKEAGNVKRFFPSEFG DVDR H AVEP +  ++ KA+IRR VE+EG+PYTY+  + F GYFL NL Q  AT PPRDKVVI GDGN +  +  E D+GTYTI+A +DP TLNK  +I+ P N  + N++++LWE+KIGKTLEK YVSEEQ+LK+IQ ++ PHN +L++YHS  +KG
Sbjct:   67 GVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGNVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEVIALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKG 284          

HSP 2 Score: 22.3274 bits (46), Expect = 4.165e-73
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  686 QIEPSFGVEASQLYPDV 736
            +I+P+  VEA   YPDV
Sbjct:  289 EIDPAKDVEAYDAYPDV 305          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.449e-66
Identity = 129/227 (56.83%), Postives = 159/227 (70.04%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQPNFRLN 695
            GV +++GD+ +  SLV A+K  DVVIS +G   IADQ +++ AIKEAGNVKRFFPSEFG DVDR  G VEP KS    K  IRRA EA GIPYTY  + FF G+ LP + Q  A  PP DK V+ GDG+ KAVF +E DI TYT+ A DDPR  NK  YI+PP N  S N+L+SLWE+K GKT  +EYV EE +LK IQE+  P N+IL+I H+AFV+G Q  F ++
Sbjct:   57 GVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEID 282          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52
Identity = 103/232 (44.40%), Postives = 146/232 (62.93%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVG------HTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQPNFRL 692
            G I+++    +H+SLV A+K VDVVI T+       H L+  Q+K++ AIK+AGN+KRF PSEFG D   +  A+EP + T+D K  +R+A+E   IP+TY+ +  F GYF  NL Q     PPRDKV+++GDGN K V+  EDD+ TYTIK +DDPRTLNK  Y++PP NI +  +L+  WE  IGK LEK  +SE+  L  ++       V +  ++  F +G   NF +
Sbjct:   55 GAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQLEKNSISEKDFLSTLKGLDFASQVGVGHFYHIFYEGCLTNFEI 285          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.621e-50
Identity = 107/233 (45.92%), Postives = 148/233 (63.52%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQPNFRL--NHLLE 707
            GV I  G++  H+ LV   K+VD+VIST+      +Q+K+I AIKEAGN+KRF PSEFGN+VDRV  A+   ++  D K  IRRA EA GIP+T+V +     YF+  LL P   +   ++V I+G G+ KAV N E+D+  YTIKA DDPR  N+   I+PP NI S  DLVS WE+  G TL+  ++SE++++K  +    P N+  SI H+ F+ G Q +F L  +H LE
Sbjct:   58 GVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR-ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKMTHISEQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLE 286          
BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.998e-46
Identity = 96/224 (42.86%), Postives = 141/224 (62.95%), Query Frame = 3
Query:   15 GVIIMQGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQPNF 686
            G II++G++  HE LV+ +K+VDVVIS +    I DQ KI+ AIK AGN+KRF PS+FG + DR++ A+ P ++  + K  IRRA+E   IPYTYV +  F  YF+  LL+P     P+D++ ++G G  K   N E DIG YTIK   DPR LN+    +P  NI +  +L+S WE+KIGK  +K +V EE+++   +E   P N+ ++I H  F+ G   ++
Sbjct:   55 GAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN-ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSY 274          
The following BLAST results are available for this feature:
BLAST of FC930473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU1.163e-9073.45Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_ARATH2.056e-8164.94Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_MEDSA1.720e-7461.64Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_CICAR2.925e-7463.01Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFRH_TOBAC7.572e-7462.83Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFR_PEA4.165e-7361.19Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_MAIZE4.449e-6656.83Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_LUPAL4.776e-5244.40Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
IGS1_PETHY2.621e-5045.92Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
EGS1_OCIBA2.998e-4642.86Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34007H10EF PostHarvC1 Citrus clementina cDNA clone C34007H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930473 ID=FC930473; Name=FC930473; organism=Citrus clementina; type=EST; length=736bp
GAATTTTTGTGGGTGGTGTTATTATTATGCAGGGAGATGTTTTGAATCAC
GAGAGTTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACAGT
TGGTCACACTTTAATAGCCGATCAGGTCAAGATTATTGCTGCCATTAAAG
AAGCCGGTAACGTTAAGAGATTCTTCCCATCGGAATTTGGAAATGATGTT
GATCGAGTCCATGGCGCCGTGGAGCCAACAAAATCGACGTATGACGTAAA
GGCGAACATCCGCCGAGCCGTTGAGGCAGAAGGCATTCCGTACACGTACG
TAGAATCTTATTTTTTTGATGGCTACTTCCTCCCTAATTTGTTGCAGCCT
GGGGCCACTGCCCCCCCTAGGGATAAGGTTGTCATCTTCGGCGATGGAAA
TCCAAAAGCTGTTTTTAACAAGGAAGATGATATTGGAACCTACACTATCA
AAGCGGTTGATGATCCGAGAACCTTGAACAAAAACTTTTACATTCAGCCT
CCCGGTAATATTTACTCATTCAATGATCTTGTGTCTCTGTGGGAGAGAAA
GATTGGTAAAACCCTCGAAAAGGAGTATGTTTCAGAGGAGCAGCTCCTAA
AGAATATTCAAGAAGCTGCACCTCCACACAATGTGATATTATCAATTTAT
CACTCTGCTTTCGTGAAGGGAGTTCAACCAAACTTCAGATTGAACCATCT
TTTGGAGTTGAAGCCTCGCAGCTTTATCCTGATGTC
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