FC930526

Overview
NameFC930526
Unique NameFC930526
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15168 contig Ccv1_Contig15168:1..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 328.176 bits (840), Expect = 2.699e-89
Identity = 157/206 (76.21%), Postives = 172/206 (83.50%), Query Frame = 2
Query:   89 DAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            DAEKL  LKSAVAGLNQISENEK+GFINLV RYLSGEAQH++WSKIQTPTDE+VVPYD LAP+ EDPAE                    MGCTGPKSVIEVRNGLTFLDLIV QIE LNAK+GC+VPLLLMNSFNTHDDT KI+EKY+ SN++IHTFNQSQYPRL  +DF PLPCKG + KDGWYPPGHGDVFPSLMNSG+LDAL+
Sbjct:   11 DAEKLNNLKSAVAGLNQISENEKSGFINLVGRYLSGEAQHIDWSKIQTPTDEVVVPYDKLAPLSEDPAETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVKQIEALNAKFGCSVPLLLMNSFNTHDDTLKIVEKYANSNIDIHTFNQSQYPRLVTEDFAPLPCKGNSGKDGWYPPGHGDVFPSLMNSGKLDALL 216          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.309e-87
Identity = 155/208 (74.52%), Postives = 171/208 (82.21%), Query Frame = 2
Query:   83 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            AT  ++L+ LKS+VAGLNQISENEK+GFINLVARYLSGEAQHVEWSKIQTPTDE+VVPYD+LAP P+   E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN+KYG NVPLLLMNSFNTHDDT  I+EKY  SN+EIHTFNQSQYPRL  DDF+PLP KG+TDKDGWYPPGHG +FPSL NSG+LDALI
Sbjct:    4 ATATDRLSNLKSSVAGLNQISENEKSGFINLVARYLSGEAQHVEWSKIQTPTDEVVVPYDTLAPTPDGSLEIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNSKYGSNVPLLLMNSFNTHDDTQTIVEKYQNSNIEIHTFNQSQYPRLVVDDFLPLPSKGRTDKDGWYPPGHGSMFPSLSNSGKLDALI 211          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.764e-86
Identity = 154/208 (74.04%), Postives = 171/208 (82.21%), Query Frame = 2
Query:   83 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            AT  EKL QLKSAV GL ++SENEK+GFINLV+RYLSGEAQH+EWSKIQTPTDEIVVPYD +A V ED +E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KY C VPL+LMNSFNTHDDT KI+EKY+KSNV+IHTFNQS+YPR+ AD+FVP P KGKTDKDGWYPPGHGDVFPSLMNSG+LDA +
Sbjct:    3 ATATEKLPQLKSAVDGLTEMSENEKSGFINLVSRYLSGEAQHIEWSKIQTPTDEIVVPYDKMANVSEDASETKYLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYNCKVPLVLMNSFNTHDDTQKIVEKYTKSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKDGWYPPGHGDVFPSLMNSGKLDAFL 210          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.213e-83
Identity = 153/201 (76.12%), Postives = 164/201 (81.59%), Query Frame = 2
Query:  107 QLKSAVAGLNQISENEKNGFINLVARYLSGE-AQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            +LKS VA L+QISENEKNGFINLV+RY+SGE AQHVEWSKIQTPTDE+VVPYD LAP PEDP E                    MGCTGPKSVIEVRNGLTFLDLIVIQIENLN KYG  VPLLLMNSFNTHDDT KI+EKYSKSNV+IHTFNQSQYPRL  +DF PLP KG+T KDGWYPPGHGDVFPSL NSG+LD L+
Sbjct:   11 KLKSDVASLSQISENEKNGFINLVSRYVSGEEAQHVEWSKIQTPTDEVVVPYDGLAPTPEDPEEIKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNNKYGSCVPLLLMNSFNTHDDTQKIVEKYSKSNVQIHTFNQSQYPRLVVEDFSPLPSKGQTGKDGWYPPGHGDVFPSLKNSGKLDLLL 211          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.775e-83
Identity = 147/209 (70.33%), Postives = 169/209 (80.86%), Query Frame = 2
Query:   80 MATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            MA   E L QLKSAV GL ++SE+EK+GFI+LV+RYLSGEAQH+EWSKIQTPTDEIVVPY+ + PV +D AE                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KYGC VPL+LMNSFNTHDDT KI+EKY+ SNV+IHTFNQS+YPR+ AD+FVP P KGKTDK+GWYPPGHGDVFP+LMNSG+LD  +
Sbjct:    1 MAATTENLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFL 209          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.434e-82
Identity = 147/203 (72.41%), Postives = 165/203 (81.28%), Query Frame = 2
Query:   98 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            K+ +L+SAVA LNQISENEK+GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+L+P PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGCNVPLLLMNSFNTHDDT KI+EKY+ SN+EIHTFNQSQYPRL  +DF PLP KG   KDGWYPPGHGDVFPSLMNSG+LDAL+
Sbjct:    5 KIAKLQSAVAELNQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLSPPPEDLEATKKLLDKLAVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHDDTQKIVEKYANSNIEIHTFNQSQYPRLVMEDFQPLPSKGHAGKDGWYPPGHGDVFPSLMNSGKLDALL 207          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.906e-80
Identity = 143/203 (70.44%), Postives = 162/203 (79.80%), Query Frame = 2
Query:   98 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            K+  L+ AVA L +ISENEK GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+LAP PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGC+VPLLLMNSFNTHDDT KI+EKYS SN+EIHTFNQSQYPR+  +DF+PLP KG+T KDGWYPPGHGDVFPSL NSG+LD L+
Sbjct:   11 KIDGLRDAVAKLGEISENEKAGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKGQTGKDGWYPPGHGDVFPSLNNSGKLDTLL 213          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA1_YEAST (UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=UGP1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41
Identity = 89/189 (47.09%), Postives = 117/189 (61.90%), Query Frame = 2
Query:  146 ENEKNGFINLVARYLSGEAQH--VEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            ENE + F  L  RYL  ++    +EW KI++P  + VV Y+ ++  PE+ +                     MGC GPKSVIEVR G TFLDL V QIE LN +Y  +VPLLLMNSFNT  DT  +I+KYS + + I +FNQS++PR+  D  +P+P +  +  D WYPPGHGD+F SL  SG+LDALI
Sbjct:   49 ENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTS----MGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALI 233          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA2_DICDI (UTP--glucose-1-phosphate uridylyltransferase 2 OS=Dictyostelium discoideum GN=ugpB PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40
Identity = 92/227 (40.53%), Postives = 126/227 (55.51%), Query Frame = 2
Query:   56 PRLDRINHMATDAEKLTQLKSAVAGLNQISENE--KNGFIN--------LVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            P+L      ++D          +  ++Q + NE  KN F+N        L  R+L    + ++W KI  P  ++V+ Y  L  + E                        MGCTGPKSVIEVR+  TFLDL V QI+ +N +Y   VPL+LMNSFNTH +T KII+KY  S+V+IH+FNQS++PR+  D+ +P+P K       WYPPGHGDVF +L NSG L+ LI
Sbjct:   14 PQLQAFGSRSSDLATEDLFLKKLEAISQTAPNETVKNEFLNKEIPSINKLFTRFLKNRKKVIDWDKINPPPADMVLNYKDLPAITEQRTSELASKLAVLKLNGGLGTT--MGCTGPKSVIEVRSEKTFLDLSVQQIKEMNERYNIKVPLVLMNSFNTHQETGKIIQKYKYSDVKIHSFNQSRFPRILKDNLMPVPDKLFGSDSEWYPPGHGDVFFALQNSGLLETLI 238          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA1_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1322.04 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 9.734e-39
Identity = 87/216 (40.28%), Postives = 124/216 (57.41%), Query Frame = 2
Query:   65 DRINHMATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQ--HVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            + +NH+A+  +     K+         + E + F +L +RYL  +A+   + W  +++P  E VV YD++    E                        MGC GPKS+IEVR+G +FLDL V QIE+LN KY  NVP +LMNSFNT + T+K+I+KY    ++I TFNQS+YPR+  +  +P+P    +  D WYPPGHGDVF +L NSG +D LI
Sbjct:   35 NELNHLASTVKDPLAKKAF--------QKEMDNFFSLFSRYLQEDARGSEINWDLVESPKPEQVVEYDTIT---EAGGLSRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVRDGNSFLDLSVRQIEHLNRKYNVNVPFVLMNSFNTDEATAKVIKKYEAHKIDILTFNQSRYPRVHKETLLPVPHTADSAIDEWYPPGHGDVFEALTNSGIIDTLI 239          
The following BLAST results are available for this feature:
BLAST of FC930526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
UGPA_SOLTU2.699e-8976.21UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_ASTPN4.309e-8774.52UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA1_ARATH4.764e-8674.04UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_PYRPY2.213e-8376.12UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA2_ARATH3.775e-8370.33Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_MUSAC1.434e-8272.41UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_HORVU3.906e-8070.44UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA1_YEAST6.097e-4147.09UTP--glucose-1-phosphate uridylyltransferase OS=Sa... [more]
UGPA2_DICDI1.774e-4040.53UTP--glucose-1-phosphate uridylyltransferase 2 OS=... [more]
UGPA1_SCHPO9.734e-3940.28Probable UTP--glucose-1-phosphate uridylyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionC34008E04EF PostHarvC1 Citrus clementina cDNA clone C34008E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930526 ID=FC930526; Name=FC930526; organism=Citrus clementina; type=EST; length=708bp
GGTGCCTTCACTCTCTGCTTTCAAAATATAGCGTCTCTTCTTCTAGATTC
ATCTTCCTCGTTTAGACCGAATCAATCACATGGCCACTGACGCCGAGAAG
CTCACTCAGCTCAAATCTGCCGTTGCTGGCCTCAATCAAATCAGTGAAAA
TGAGAAAAATGGATTCATCAACCTCGTTGCTCGCTATCTAAGCGGCGAAG
CGCAACACGTGGAATGGAGCAAAATCCAAACGCCTACTGATGAAATCGTA
GTTCCTTATGACAGCTTGGCACCAGTTCCTGAAGATCCAGCGGAAACCAA
AAAGCTTTTGGATAAGCTTGTCGTGTTGAAGCTCAATGGAGGTTTGGGAA
CCACAATGGGCTGCACTGGTCCCAAGTCTGTTATTGAAGTTCGTAACGGG
TTGACATTTCTTGACCTCATCGTCATCCAGATTGAGAATCTCAATGCTAA
ATATGGATGTAATGTTCCCCTGCTACTCATGAACTCGTTCAACACGCATG
ATGATACATCGAAGATTATAGAGAAGTACTCCAAATCAAATGTCGAGATT
CATACTTTTAACCAGAGCCAGTATCCTCGATTGTGTGCCGATGATTTTGT
GCCCTTACCATGCAAAGGGAAGACTGACAAGGATGGATGGTATCCTCCTG
GCCACGGTGATGTCTTCCCATCCTTAATGAACAGCGGNCAGCTTGACGCT
TTAATTTC
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