FC930575

Overview
NameFC930575
Unique NameFC930575
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15179 contig Ccv1_Contig15179:1..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.724e-32
Identity = 69/170 (40.59%), Postives = 93/170 (54.71%), Query Frame = 3
Query:  150 DINHRRVHTN-GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLT 656
            D++H  V    GI +H  E G GP + L HGFPE W  W+YQI  LA+ G+ V+A DM+GYGDS SP + E Y +                 QA  +GHDW   + WN+ LF P+RV+A+ +L    MP +PE+ P E+   +    + +  FQEPGVAE    K  S T
Sbjct:  234 DVSHGYVTVKPGIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQL-YFQEPGVAEAELEKNMSRT 402          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30
Identity = 67/170 (39.41%), Postives = 93/170 (54.71%), Query Frame = 3
Query:  150 DINHRRVHTN-GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLT 656
            D++H  V    GI +H  E G GP + L HGFPE W  W+YQI  LA+ G+ V+A DM+GYGDS SP + E Y +                 QA  +GHDW   + WN+ LF P+RV+A+ +L   +MP  P++ P ++   +    + +  FQEPGVAE    K  S T
Sbjct:  234 DVSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQL-YFQEPGVAEAELEKNMSRT 402          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.834e-30
Identity = 64/149 (42.95%), Postives = 86/149 (57.72%), Query Frame = 3
Query:  180 GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFSKLYGEGFYISQFQEPGVAE 626
            G+ +H  E G GP V L HGFPE W  W+YQI  LA+ G+ V+A DM+GYG+S +P + E Y++                 QA  +GHDWG  + WN+ LF P+RV+A+ +L   +MP +P + P EI  K      Y   FQEPGVAE
Sbjct:  247 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEII-KANPVFDYQLYFQEPGVAE 394          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 3
Query:  189 MHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLT 656
            +H  E G GP V L HGFPE W  W+YQI  LA+ GY V+A DM+GYG+S +P + E Y +                 QA  +GHDWG  + W + LF P+RV+A+ +L   ++P +P + P E   K      Y   FQEPGVAE    +  S T
Sbjct:  250 LHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESI-KANPVFDYQLYFQEPGVAEAELEQNLSRT 404          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.237e-27
Identity = 66/177 (37.29%), Postives = 98/177 (55.37%), Query Frame = 3
Query:  168 VHTNGIWMHIAEKGQ--GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKP-TEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAP 689
            V+TNGI +H+A  G+  GPL++L+HGFPE W  WK QI  L + GY V+APD RGY  SD P+  +SY I                 +A V+GHDWG  +AW+L   RP+ ++ L+ + +   P    +K  T ++   + +  YI+ FQ P + E S  + D  T+ K + L + P
Sbjct:    9 VNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINI---PHPHVMKTVTPLYPPQWLKSSYIAYFQLPDIPEASLRENDYDTLDKAIGLSDRP 182          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.833e-20
Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 3
Query:  174 TNGIWMHI--AEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLTVLKKLL 674
            ++G+ +H   A +G GPL+L +HGFPE W  W+YQ+    +  +HVVA D+RGYG SD+P+D + YTI                 +  +V HDWGA +AW+  ++ P  V+ +V +  A M    +     I    +    Y+  FQ P + EK  S  D   +LK  L
Sbjct:   82 SSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREF-QSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAPMSVYQDYSLHHI--SQFFRSHYMFLFQLPWLPEKLLSMSD-FQILKTTL 246          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.539e-20
Identity = 59/165 (35.76%), Postives = 84/165 (50.91%), Query Frame = 3
Query:  168 VHTNGIWMHI--AEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFSKLYGEGF---YISQFQEPGVAEKSFSKYD 647
            V ++G+ +H   A  G GPL+L +HGFPE W  W+YQ+     H +HVVA DMRGY  SD+P++ + YTI                 +  +V HDWGA +AW   ++ P  V+ +V   VA  P    ++   I     G+ F   Y+  FQ P + EK  S  D
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQLREFQSH-FHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMV---VANGPPMSVIQEYSIHH--IGQIFRSNYMFLFQLPWLPEKLLSMSD 245          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17
Identity = 58/178 (32.58%), Postives = 85/178 (47.75%), Query Frame = 3
Query:  165 RVHTNGIWMHIAEKGQG--PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALV-------NLGVAYMPRSPELKPTEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLTVLKKL 671
            R+  +G+  H    G+   PL+LL+HGFPE W  W++Q+       Y VVA D+RGYG+SD+P   ESY +                 +  ++GHDWG  IAW + +  P+ +  L+       ++   Y+ R P        ++L+   FY   FQ P   E  FS  D   VLK L
Sbjct:   73 RIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSE-YRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHP--------AQLFRSSFYYF-FQIPRFPEFMFSIND-FKVLKHL 239          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.836e-17
Identity = 57/178 (32.02%), Postives = 84/178 (47.19%), Query Frame = 3
Query:  165 RVHTNGIWMHIAEKGQG--PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALV-------NLGVAYMPRSPELKPTEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLTVLKKL 671
            R+  +G+  H    G+   PL+LL+HGFPE W  W+YQ+       Y VVA D+RGYG++D+P   ++Y +                 +  ++GHDWG  IAW + +  P+ V  L+       N+   Y+ R P        ++L    +Y   FQ P   E  FS  D   VLK L
Sbjct:   75 RIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSE-YRVVALDLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFPHPNVFTEYILRHP--------AQLLKSSYYYF-FQIPWFPEFMFSIND-FKVLKHL 241          
BLAST of FC930575 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.154e-16
Identity = 54/174 (31.03%), Postives = 82/174 (47.13%), Query Frame = 3
Query:  165 RVHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPEL---KPTEIFSKLYGEGFYISQFQEPGVAEKSFSKYDSLTVLKKL 671
            R+  +GI  H    G  + PL+LL+HGFPE W  W+YQ++  + +GY  VA D+RG+G SD+P   E Y +                 +  +VGHDWG  +AW   +   D V  L+ +   +     +     P+++FS       Y+  FQ P + E   S  D   + K L
Sbjct:   79 RMKDSGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFS-NGYRTVAIDLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNAPHPSAFHDYVLSHPSQLFSSR-----YVFLFQLPLIPEILLSLRDFEHIKKPL 246          
The following BLAST results are available for this feature:
BLAST of FC930575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
HYES_RAT9.724e-3240.59Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE1.075e-3039.41Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
HYES_PIG1.834e-3042.95Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_HUMAN3.824e-2840.38Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
YFHM_BACSU3.237e-2737.29AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX3_HUMAN3.833e-2034.32Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]
EPHX3_MOUSE8.539e-2035.76Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]
EPHX4_MOUSE1.363e-1732.58Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN8.836e-1732.02Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_XENTR1.154e-1631.03Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]
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Properties
Property NameValue
Genbank descriptionC34009A05EF PostHarvC1 Citrus clementina cDNA clone C34009A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930575 ID=FC930575; Name=FC930575; organism=Citrus clementina; type=EST; length=750bp
GACTTATTTGATATAGTTTAATAAAAGGTTGCAAGAAATATCTACCGAAT
ATAAACACGCCCACCATCTTTGAAATTAAACCGCATGTATCAAGTACATA
GCAAGAAAACCAAAAGAAAAAAACTCATCAGAGAGAAATCATAATGATTG
ACATAAATCACAGGAGGGTTCACACTAATGGAATATGGATGCACATAGCA
GAAAAAGGGCAAGGACCCCTTGTTCTGCTCATTCATGGCTTCCCTGAACT
TTGGTCTTGCTGGAAGTACCAGATAAATCATTTGGCTGAGCATGGTTACC
ATGTTGTTGCGCCCGATATGCGAGGCTACGGGGACTCAGATTCTCCTCAG
GATCCTGAATCATATACAATTTTTCATCTCGTTGGCGATTTGATTGGCCT
TCTGGATGAGCTTGGAGAAGAACAGGCATTTGTAGTGGGACACGACTGGG
GTGCACAAATTGCTTGGAACCTCTGCCTCTTTAGGCCAGATAGGGTAAAA
GCTCTTGTTAACTTAGGTGTTGCTTACATGCCACGCTCCCCGGAACTCAA
ACCAACTGAAATATTTTCCAAATTATATGGAGAAGGATTCTACATTTCTC
AATTTCAGGAGCCTGGAGTTGCTGAAAAATCGTTCTCCAAGTATGACTCT
TTGACAGTTTTGAAGAAGCTTTTGCTCGTAAATGCTCCCTGATATATTGC
CGCTCCCGCTGGAGNTGAAATCATCGACTTTCTTCACACCCCATCTTCAT
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