FC930592

Overview
NameFC930592
Unique NameFC930592
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig884 contig Ccv1_Contig884:8..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.326e-70
Identity = 135/245 (55.10%), Postives = 171/245 (69.80%), Query Frame = 3
Query:    3 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            E Q      + +E   +A ++   SVL M +K  I L L EI+AKAGPGA LS SEIA+ LP TKN DAP MLDRIL LLASY I+ CS+ D+ DG   RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ I+EGG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE YKGFE +  LVDVGG  G  +  I SKYP IKGINFDLPHVI+ +P YPGV+HVG
Sbjct:    6 ETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLP-TKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVG 249          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.955e-70
Identity = 134/245 (54.69%), Postives = 171/245 (69.80%), Query Frame = 3
Query:    3 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            E Q      + +E   +A ++   SVL M +K  I L L EI+AKAGPGA LS SEIA+ LP TKN DAP MLDRIL LLASY I+ CS+ D+ DG   RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ I++GG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE YKGFE +  LVDVGG  G  +  I SKYP IKGINFDLPHVI+ +P YPGV+HVG
Sbjct:    6 ETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLP-TKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVG 249          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.572e-69
Identity = 127/242 (52.48%), Postives = 170/242 (70.25%), Query Frame = 3
Query:   12 ENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            +N   +  +E    A  +   SVL M +K+ I L L E+I K+GPGA +S SE+AAQLP T+N DAP MLDRIL LLASY ++ C++ D+   G  RLY L  V K+   N+DGVS+  +L + QDK  ++SW  LK+ ++EGG+PF++ +G  AFEY G DPRFN+VF+  M NH+T++++KILE Y+GF+ +K +VDVGG  G TL  I SKYP IKGINFDLPHVI+ +P YPGV HVG
Sbjct:    9 KNSMTKEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLP-TQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVG 249          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.612e-68
Identity = 124/236 (52.54%), Postives = 170/236 (72.03%), Query Frame = 3
Query:   30 ARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV--DGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            A +E   +A  +   SVL M +K+ I L L E+IAKAGPGA +S SE+AAQLP T N +AP MLDRIL LLA+Y +++C ++++   G  RLYGL  V K+   N DGVS+ P+L + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN+VF+  M NH+T+ ++KILE Y+GFE +K +VDVGG  G TL  I SKYP IKGINF+LPHV++ +P + GV+HVG
Sbjct:    2 AEEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLP-THNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVG 236          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.717e-68
Identity = 130/234 (55.56%), Postives = 167/234 (71.37%), Query Frame = 3
Query:   36 DENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            DE   +A ++   SVL M +K  I L L EI+AKAGPGA LS S+IA+ LP TKN DAP MLDRIL LLASY I+ CS+ D+ DG   RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ I+EGG+PF++ +G  AFEY G DPRFN+VF+  M +H+ + ++KILE+YKGFE +  LVDVGG  G  +  I SKYP IKGINFDLPHVI  +P +PGV++VG
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLP-TKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVG 248          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.161e-68
Identity = 130/245 (53.06%), Postives = 171/245 (69.80%), Query Frame = 3
Query:    3 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            E Q      + +E   +A ++   SVL M +KA I L L EI+AKAGPG  LS ++IA+QLP TKN DAP MLDR+L LLASY I+  S+  + DG   RLYGL  V K+   N++GVS+ P+  + QDK  L+SW  LK+ ++EGG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE YKGFE +  +VDVGG  G  L  I SKYP IKGINFDLPHVI+ +P+YPGV+HVG
Sbjct:    6 ETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLP-TKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVG 249          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.372e-67
Identity = 124/238 (52.10%), Postives = 165/238 (69.33%), Query Frame = 3
Query:   24 NEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            N   +ENF +A ++   SVL M +K+ I L L E+I K+G GA +S  ++AAQLP T N DA  MLDRIL LL SY I+EC +  +   G  RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  L + +++GG+PF++ +G  AFEY G DPRFN+VF+  M NH+T+ ++KILE Y GF+ +K +VDVGG  G TL  I SKYP IKGINFDLPHVI+ +P YPGV+HVG
Sbjct:   11 NSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTT-NPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVG 247          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.372e-67
Identity = 130/245 (53.06%), Postives = 171/245 (69.80%), Query Frame = 3
Query:    3 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSV-DDVDGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            E Q    + + +E   +A ++   SVL M +K+ + L L EIIAKAGPGA++S  EIA+QLP T N DAP MLDR+L LLA Y I+ CSV    DG   RLYGL  V+KY V N+DGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE Y GFE +K LVDVGG  G  +  I SKYP IKGINFDLPHVI+ +P YPGV+HVG
Sbjct:    6 ETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTT-NPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVG 249          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.341e-67
Identity = 124/238 (52.10%), Postives = 166/238 (69.75%), Query Frame = 3
Query:   24 NEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            N   +ENF +A ++   SVL M +K+ I L L E+I KAG GA +S +E+AAQL  T N +A  MLDRIL LL SY I+EC +  +   G  RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN+VF+  M NH+T+ ++KILE Y GF+ +K +VDVGG  G TL  I SKYP IKGINFDLPHV++ +P YPGV+HVG
Sbjct:   11 NSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQL-LTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVG 247          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 3.993e-67
Identity = 125/237 (52.74%), Postives = 168/237 (70.89%), Query Frame = 3
Query:   27 EARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            +  DE F +A ++   SVL M +K+ + L L EI+AKAGPGA +S SE+AAQLP TKN +AP MLDR+L LLA+Y ++ C++  + DG   RLY L  V K    N DGVS+ P+L + QDK  ++SW  L + +++GGVPF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE YKGFE +  +VDVGG  G T+  I SKYP IKGINFDL HVI+ +P YPGV+HVG
Sbjct:   10 QTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLP-TKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVG 245          
The following BLAST results are available for this feature:
BLAST of FC930592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
COMT1_POPKI1.326e-7055.10Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM2.955e-7054.69Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CATRO5.572e-6952.48Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_COFCA3.612e-6852.54Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT3_POPKI4.717e-6855.56Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_PRUDU6.161e-6853.06Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA1.372e-6752.10Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_MEDSA1.372e-6753.06Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT2_OCIBA2.341e-6752.10Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CAPAN3.993e-6752.74Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]

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Properties
Property NameValue
Genbank descriptionC34009B11EF PostHarvC1 Citrus clementina cDNA clone C34009B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930592 ID=FC930592; Name=FC930592; organism=Citrus clementina; type=EST; length=731bp
GGGAAATTCAAGAAAATATGGCTAATGAAGCGAGAGACGAAAACTTTGCA
TATGCCTTTGAAGTGACGATGGGTTCAGTGCTCCACATGACCATGAAAGC
AGTAATTAATCTGGGACTTTTCGAGATCATAGCCAAAGCTGGTCCTGGAG
CAAAGCTCTCAGCTTCAGAGATTGCCGCTCAGTTGCCCGCCACGAAGAAC
AAAGACGCACCCACGATGCTGGACCGGATACTCGGGCTTCTGGCTAGCTA
TGGCATTGTTGAATGCTCAGTTGATGATGTCGATGGTTCTCACAGGCTAT
ACGGTTTGAATGATGTTTCCAAATACTTTGTGCCTAATCAAGATGGTGTC
TCATTAGGCCCTGTATTGGCCTTAATTCAGGACAAGGCCTTTCTCGACAG
CTGGTCCCAACTGAAAGAAACTATTATTGAAGGAGGAGTTCCATTTGACC
GAGTCCACGGAACGAACGCTTTCGAGTACCAAGGATTGGACCCCAGGTTC
AATGAAGTTTTCAGCACAGCAATGTACAACCATACCACTTTGGTCCTTCA
AAAGATCCTTGAGGCTTACAAGGGTTTCGAGCACATAAAGCAATTGGTTG
ATGTTGGCGGTTCCCTTGGCAATACCCTTAAAGCAATTACTTCCAAGTAT
CCCCACATTAAGGGCATCAATTTCGACTTGCCTCACGTTATACAGCATTC
CCCTGAGTATCCTGGTGTTAAGCATGTAGGG
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