FC930597

Overview
NameFC930597
Unique NameFC930597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3356 contig Ccv1_Contig3356:41..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL4B_TOBAC (Bifunctional nitrilase/nitrile hydratase NIT4B OS=Nicotiana tabacum GN=NIT4B PE=2 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 8.149e-118
Identity = 204/223 (91.48%), Postives = 216/223 (96.86%), Query Frame = 2
Query:   47 VASDAPLFAEVDMGADSSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREVWQASMTHIAL 715
            V ++ P+FAEVDMG +SS PTVRATVVQASTIFYDTPATLDKAERLLAEAA YG+QLVVFPEAFIGGYPRGS FGV+IGNRTAKGKEEFRKY ASAIDVPGPEV+RLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGH+LGKHRKIMPTALERIIWGFGDGSTIPV++TP+GKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSR+VWQASMTHIAL
Sbjct:    8 VVNEGPMFAEVDMGDNSSTPTVRATVVQASTIFYDTPATLDKAERLLAEAASYGAQLVVFPEAFIGGYPRGSTFGVSIGNRTAKGKEEFRKYHASAIDVPGPEVDRLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERIIWGFGDGSTIPVYDTPLGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSRDVWQASMTHIAL 230          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL4A_TOBAC (Bifunctional nitrilase/nitrile hydratase NIT4A OS=Nicotiana tabacum GN=NIT4A PE=2 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 6.899e-117
Identity = 204/221 (92.31%), Postives = 214/221 (96.83%), Query Frame = 2
Query:   53 SDAPLFAEVDMGADSSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREVWQASMTHIAL 715
            ++ PLFAEVDMG +SS PTVRATVVQASTIFYDTPATL KAERLLAEAA YG+QLVVFPEAFIGGYPRGS FGV+IGNRTAKGKEEFRKY ASAIDVPGPEV+RLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPV++TP+GKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSR+VWQASMTHIAL
Sbjct:   10 NEGPLFAEVDMGDNSSTPTVRATVVQASTIFYDTPATLVKAERLLAEAASYGAQLVVFPEAFIGGYPRGSTFGVSIGNRTAKGKEEFRKYHASAIDVPGPEVDRLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVYDTPLGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSRDVWQASMTHIAL 230          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL4_ARATH (Bifunctional nitrilase/nitrile hydratase NIT4 OS=Arabidopsis thaliana GN=NIT4 PE=1 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.763e-104
Identity = 185/217 (85.25%), Postives = 198/217 (91.24%), Query Frame = 2
Query:   65 LFAEVDMGADSSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREVWQASMTHIAL 715
            +F E+DM A  S+  VRATVVQAST+FYDTPATLDKAERLL+EAA  GSQLVVFPEAFIGGYPRGS F + IG+RTAKG+++FRKY ASAIDVPGPEVERLA MA KYKVYLVMGVIER+GYTLYCTVLFFDSQG FLGKHRK+MPTALER IWGFGDGSTIPVF+TPIGKIGAAICWENRMP LRTAMYAKGIEIYCAPTADSRE W ASMTHIAL
Sbjct:   21 IFPEIDMSAGDSSSIVRATVVQASTVFYDTPATLDKAERLLSEAAENGSQLVVFPEAFIGGYPRGSTFELAIGSRTAKGRDDFRKYHASAIDVPGPEVERLALMAKKYKVYLVMGVIEREGYTLYCTVLFFDSQGLFLGKHRKLMPTALERCIWGFGDGSTIPVFDTPIGKIGAAICWENRMPSLRTAMYAKGIEIYCAPTADSRETWLASMTHIAL 237          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL4_ORYSJ (Bifunctional nitrilase/nitrile hydratase NIT4 OS=Oryza sativa subsp. japonica GN=NIT4 PE=2 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 6.698e-104
Identity = 187/236 (79.24%), Postives = 209/236 (88.56%), Query Frame = 2
Query:   38 MAIVASDA----PLFAEVDM--GADSSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFG----VTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREVWQASMTHIAL 715
            MA+V S +    P+ AEV+M  GADS A TVRATVVQAST+FYDTPATLDKAERL+ EAAGYGSQLVVFPEAF+GGYPRGS FG    ++IGN   KGKEEFRKY A+AI+VPGPEV RLAAMAGKYKV+LVMGVIER+GYTLYC+VLFFD  G +LGKHRK+MPTALERIIWGFGDGSTIPV++TP+GKIGA ICWEN+MPLLRTA+Y KGIEIYCAPTADSR+VWQASMTHIAL
Sbjct:    1 MAMVPSGSGGGPPVIAEVEMNGGADSGAATVRATVVQASTVFYDTPATLDKAERLIEEAAGYGSQLVVFPEAFVGGYPRGSTFGFGANISIGNPKDKGKEEFRKYHAAAIEVPGPEVTRLAAMAGKYKVFLVMGVIEREGYTLYCSVLFFDPLGRYLGKHRKLMPTALERIIWGFGDGSTIPVYDTPLGKIGALICWENKMPLLRTALYGKGIEIYCAPTADSRQVWQASMTHIAL 236          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL2_ARATH (Nitrilase 2 OS=Arabidopsis thaliana GN=NIT2 PE=1 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.827e-86
Identity = 148/207 (71.50%), Postives = 175/207 (84.54%), Query Frame = 2
Query:   95 SSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREVWQASMTHIAL 715
            +S+  VRAT+VQAST++ DTPATL+KA + + EAA  GS+LVVFPEAFIGGYPRG  FG+ +G    +G++EFRKY ASAI VPGPEVE+LA +AGK  VYLVMG IE+DGYTLYCT LFF  QG FLGKHRK+MPT+LER IWG GDGSTIPV++TPIGK+GAAICWENRMPL RTA+YAKGIE+YCAPTAD  + WQ+SM HIA+
Sbjct:   13 ASSTIVRATIVQASTVYNDTPATLEKANKFIVEAASKGSELVVFPEAFIGGYPRGFRFGLGVGVHNEEGRDEFRKYHASAIKVPGPEVEKLAELAGKNNVYLVMGAIEKDGYTLYCTALFFSPQGQFLGKHRKLMPTSLERCIWGQGDGSTIPVYDTPIGKLGAAICWENRMPLYRTALYAKGIELYCAPTADGSKEWQSSMLHIAI 219          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL3_ARATH (Nitrilase 3 OS=Arabidopsis thaliana GN=NIT3 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.822e-86
Identity = 155/231 (67.10%), Postives = 184/231 (79.65%), Query Frame = 2
Query:   23 NKTTEMAIVASDAPLFAEVDMGADSSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREVWQASMTHIAL 715
            + T EM+ V +   +     +G D S+ TVR T+VQ+ST++ DTPATLDKAE+ + EAA  G++LV+FPEAFIGGYPRG  FG+ +G    +G++EFR Y ASAI VPGPEVERLA +AGK  V+LVMG IE+DGYTLYCT LFF  QG FLGKHRK+MPT+LER IWG GDGSTIPV++TPIGKIGAAICWENRMPL RTA+YAKGIEIYCAPTAD    WQASM HIA+
Sbjct:    2 SSTEEMSSVKNTTQV-----IGVDPSS-TVRVTIVQSSTVYNDTPATLDKAEKFIVEAASKGAKLVLFPEAFIGGYPRGFRFGLAVGVHNEEGRDEFRNYHASAIKVPGPEVERLAELAGKNNVHLVMGAIEKDGYTLYCTALFFSPQGQFLGKHRKVMPTSLERCIWGQGDGSTIPVYDTPIGKIGAAICWENRMPLYRTALYAKGIEIYCAPTADYSLEWQASMIHIAV 226          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL1_ARATH (Nitrilase 1 OS=Arabidopsis thaliana GN=NIT1 PE=1 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 7.699e-84
Identity = 147/231 (63.64%), Postives = 181/231 (78.35%), Query Frame = 2
Query:   23 NKTTEMAIVASDAPLFAEVDMGADSSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREVWQASMTHIAL 715
            + T +M+ V +  P          + + TVR T+VQ+ST++ DTPAT+DKAE+ + EAA  G++LV+FPE FIGGYPRG  FG+ +G    +G++EFRKY ASAI VPGPEV RLA +A K  VYLVMG IE++GYTLYCTVLFF  QG FLGKHRK+MPT+LER IWG GDGSTIPV++TPIGK+GAAICWENRMPL RTA+YAKGIE+YCAPTAD  + WQ+SM HIA+
Sbjct:    2 SSTKDMSTVQNATPF------NGVAPSTTVRVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYPRGFRFGLAVGVHNEEGRDEFRKYHASAIHVPGPEVARLADVARKNHVYLVMGAIEKEGYTLYCTVLFFSPQGQFLGKHRKLMPTSLERCIWGQGDGSTIPVYDTPIGKLGAAICWENRMPLYRTALYAKGIELYCAPTADGSKEWQSSMLHIAI 226          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NIT1_YEAST (Putative nitrilase-like protein NIT1 OS=Saccharomyces cerevisiae GN=NIT1 PE=5 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.325e-51
Identity = 99/182 (54.40%), Postives = 128/182 (70.33%), Query Frame = 2
Query:  152 TPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPG----PEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADSREV 685
            T  TL K      E    G++LVV PEA +GGYP+GSNFGV +G R  +G+EE+ KY A AI++      PE+ +L A++      L +G IERDG TLYCT+++ D +  ++GKHRK+MPTA ER+IWG GDGST+PV +T  GKIG AICWEN MPLLR AMY KG+EI+CAPT D+R +
Sbjct:   18 TKDTLKKILSYEKEIKESGAKLVVIPEATLGGYPKGSNFGVYLGYRLQEGREEYAKYLAEAIEIGNGEKYPEISQLCALSKATDASLCVGCIERDGTTLYCTMVYIDPKDGYVGKHRKLMPTAGERLIWGQGDGSTLPVVDTAAGKIGGAICWENMMPLLRYAMYKKGVEIWCAPTVDARPI 199          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL_BACSX (Nitrilase OS=Bacillus sp. (strain OxB-1) GN=nit PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.060e-35
Identity = 80/189 (42.33%), Postives = 115/189 (60.85%), Query Frame = 2
Query:   95 SSAPTVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCA 661
            S+ P  R   VQAS +  D  AT+DK  RL+ EAA  G++++ FPEAFI GYP    + + +GN     K   + Y+ S +++P   V++L++ AG  KVY  + V E+DG +LY T L+FD  G  +GKHRK+  T  E+ IWG GDGS +PVFET  G +G   CWE+ +PL   AM +   +++ A
Sbjct:    2 SNYPKYRVAAVQASPVLLDLDATIDKTCRLVDEAAANGAKVIAFPEAFIPGYP----WWIWLGNADYGMKYYIQLYKNS-VEIPSLAVQKLSS-AGTNKVYFCVSVTEKDGGSLYLTQLWFDPNGDLIGKHRKLKATNAEKTIWGDGDGSMMPVFETEFGNLGGLQCWEHFLPLNVAAMASMNEQVHVA 184          
BLAST of FC930597 vs. ExPASy Swiss-Prot
Match: NRL2_RHORH (Aliphatic nitrilase OS=Rhodococcus rhodochrous GN=nitA PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29
Identity = 65/185 (35.14%), Postives = 108/185 (58.38%), Query Frame = 2
Query:  107 TVRATVVQASTIFYDTPATLDKAERLLAEAAGYGSQLVVFPEAFIGGYPRGSNFGVTIGNRTAKGKEEFRKYRASAIDVPGPEVERLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCA 661
            T +   VQA  +++D   T+DK   ++AEAA  G +LV FPE FI GYP    + + + +  A   +   +Y  +++ +  P V+RL   A  + + +V+G+ ERDG +LY T L  D+ G  + + RK+ PT +ER ++G G+GS I V++ P  ++GA  CWE+   L + AMY+   +++ A
Sbjct:    7 TFKVAAVQAQPVWFDAAKTVDKTVSIIAEAARNGCELVAFPEVFIPGYP----YHIWVDSPLAGMAKFAVRYHENSLTMDSPHVQRLLDAARDHNIAVVVGISERDGGSLYMTQLVIDADGQLVARRRKLKPTHVERSVYGEGNGSDISVYDMPFARLGALNCWEHFQTLTKYAMYSMHEQVHVA 187          
The following BLAST results are available for this feature:
BLAST of FC930597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
NRL4B_TOBAC8.149e-11891.48Bifunctional nitrilase/nitrile hydratase NIT4B OS=... [more]
NRL4A_TOBAC6.899e-11792.31Bifunctional nitrilase/nitrile hydratase NIT4A OS=... [more]
NRL4_ARATH1.763e-10485.25Bifunctional nitrilase/nitrile hydratase NIT4 OS=A... [more]
NRL4_ORYSJ6.698e-10479.24Bifunctional nitrilase/nitrile hydratase NIT4 OS=O... [more]
NRL2_ARATH2.827e-8671.50Nitrilase 2 OS=Arabidopsis thaliana GN=NIT2 PE=1 S... [more]
NRL3_ARATH4.822e-8667.10Nitrilase 3 OS=Arabidopsis thaliana GN=NIT3 PE=1 S... [more]
NRL1_ARATH7.699e-8463.64Nitrilase 1 OS=Arabidopsis thaliana GN=NIT1 PE=1 S... [more]
NIT1_YEAST1.325e-5154.40Putative nitrilase-like protein NIT1 OS=Saccharomy... [more]
NRL_BACSX5.060e-3542.33Nitrilase OS=Bacillus sp. (strain OxB-1) GN=nit PE... [more]
NRL2_RHORH1.426e-2935.14Aliphatic nitrilase OS=Rhodococcus rhodochrous GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34009C04EF PostHarvC1 Citrus clementina cDNA clone C34009C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930597 ID=FC930597; Name=FC930597; organism=Citrus clementina; type=EST; length=716bp
GATCTCAAACTGAGAAAGAAAAAACAAAACAACAGAAATGGCGATAGTAG
CATCAGACGCACCACTCTTTGCCGAAGTGGACATGGGTGCGGACTCATCT
GCACCCACGGTCCGCGCCACCGTCGTCCAGGCCTCCACCATTTTCTACGA
CACGCCCGCCACTTTGGATAAGGCGGAGAGATTGCTAGCTGAAGCGGCGG
GGTATGGGTCCCAGCTAGTTGTGTTTCCAGAAGCATTCATCGGTGGATAT
CCGCGTGGTTCAAATTTTGGCGTGACAATTGGCAATCGAACGGCTAAGGG
TAAAGAGGAGTTTCGCAAGTATCGCGCTTCGGCCATTGATGTTCCTGGTC
CTGAAGTTGAGCGACTGGCGGCTATGGCTGGGAAATATAAGGTTTATTTG
GTAATGGGTGTGATAGAGAGAGATGGGTATACACTGTACTGCACTGTTTT
GTTTTTTGATTCTCAGGGTCATTTCCTGGGGAAGCACCGAAAAATCATGC
CAACAGCATTGGAGCGTATAATTTGGGGATTTGGAGATGGATCCACAATT
CCTGTTTTCGAAACGCCAATTGGAAAAATTGGTGCTGCCATTTGCTGGGA
AAATAGAATGCCACTTCTTAGGACAGCCATGTATGCTAAAGGGATTGAAA
TATATTGTGCTCCTACAGCTGATTCCAGGGAAGTTTGGCAAGCGTCAATG
ACCCATATTGCCCTTG
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