FC930598

Overview
NameFC930598
Unique NameFC930598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10185 contig Ccv1_Contig10185:1..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.660e-79
Identity = 139/156 (89.10%), Postives = 148/156 (94.87%), Query Frame = 2
Query:  221 PPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            P LNERILSS+SRRSVAAHPWHDLEIGP AP +FN VIEI KGSKVKYELDKK+GLI VDR+LYSSVVYP NYGFIPRTLCEDNDP+DVL++MQEPVLPGCFLRA+AIGLMPMIDQGEKDDKIIAVCADDPEYRHY DIK+LPPHRLAEIRRFFED
Sbjct:   15 PRLNERILSSISRRSVAAHPWHDLEIGPEAPSVFNVVIEISKGSKVKYELDKKTGLIKVDRILYSSVVYPQNYGFIPRTLCEDNDPMDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFFED 170          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.076e-78
Identity = 138/170 (81.18%), Postives = 150/170 (88.24%), Query Frame = 2
Query:  179 ETSSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            E  +     QP   P LNERILSS+SRRSVAAHPWHDLEIGP AP +FN V+EI KGSKVKYELDKK+GLI VDRVLYSSVVYPHNYGF+PRTLCEDNDP+DVL++MQEPV+PG FLRA+AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI EL PHRL EI+RFFED
Sbjct:    4 EDKTAASAEQPKRAPKLNERILSSLSRRSVAAHPWHDLEIGPDAPAVFNVVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFVPRTLCEDNDPMDVLVLMQEPVVPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFED 173          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 9.109e-78
Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 2
Query:  179 ETSSKTPVSQ--PPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            E   K P+    PPA   LNERILSSMS++ VAAHPWHDLEIGPGAP +FNCV+EI +GSKVKYELDK +GLI VDRVLYSSVVYPHNYGFIPRTLCED DP+DVL++MQE V+PGCFLRA+AIGLMPMIDQGEKDDKIIAVCADDPEYRH+ DIKE+PPHRL EIRRFFED
Sbjct:    4 EADGKAPLGSRYPPA--ALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFED 173          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 9.109e-78
Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 2
Query:  179 ETSSKTPVSQ--PPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            E   K P+    PPA   LNERILSSMS++ VAAHPWHDLEIGPGAP +FNCV+EI +GSKVKYELDK +GLI VDRVLYSSVVYPHNYGFIPRTLCED DP+DVL++MQE V+PGCFLRA+AIGLMPMIDQGEKDDKIIAVCADDPEYRH+ DIKE+PPHRL EIRRFFED
Sbjct:    4 EADGKAPLGSRYPPA--ALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFED 173          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.361e-73
Identity = 127/154 (82.47%), Postives = 140/154 (90.91%), Query Frame = 2
Query:  227 LNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            LNER  ++ + RS AAHPWHDLEIGP AP +FNCV+EI KG KVKYELDK SGLI VDRVLYSS+VYPHNYGFIPRT+CED+DP+DVL++MQEPVL G FLRA+AIGLMPMIDQGEKDDKIIAVCADDPE+RHY DIKELPPHRLAEIRRFFED
Sbjct:   24 LNERNFAAFTHRSAAAHPWHDLEIGPEAPTVFNCVVEISKGGKVKYELDKNSGLIKVDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFED 177          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.034e-69
Identity = 128/164 (78.05%), Postives = 143/164 (87.20%), Query Frame = 2
Query:  185 SSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRR 676
            +++ P S+P   P LNERILSS+SRR   AHPWHDLEIGPGAP +FN V+EI KGSKVKYELDKK+GLI VDRVLYSSVVYPHNYGFIPRTLCEDNDP+DVL++MQEPV+PG FLRA+AIGLMPMIDQGEKDDKIIAVCADDPEYRHY+    L P RL EI+R
Sbjct:   11 AAQQPTSRPA--PKLNERILSSLSRRGGGAHPWHDLEIGPGAPAVFNVVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYSTSVSLLP-RLQEIKR 171          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR2_CHLRE (Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.119e-59
Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 2
Query:  260 RSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            R  A+HPWHDL  G  AP   +CVIEI +GSKVKYELDK +GL  VDR+LYSSVVYPHNYGF+P+TLCED DPLDVL++MQEPV+P CFLRAK IG+M M+DQGE+DDK+IAV ADDPEY+ + DI +LPPHRLAEI+RFFED
Sbjct:    5 RGTASHPWHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDRILYSSVVYPHNYGFVPKTLCEDGDPLDVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRLAEIKRFFED 147          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIN (Inorganic pyrophosphatase OS=Leptospira interrogans GN=ppa PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.615e-42
Identity = 78/138 (56.52%), Postives = 101/138 (73.19%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            HPWHD+  G   P+I N VIEI +GS+ KYE+DK+ G++ +DRVLYSS  YP NYGFIP++ C D DPLD+L++ Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D    H NDI ELPPH   E++ FFED
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFFED 140          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIC (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ppa PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.615e-42
Identity = 78/138 (56.52%), Postives = 101/138 (73.19%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            HPWHD+  G   P+I N VIEI +GS+ KYE+DK+ G++ +DRVLYSS  YP NYGFIP++ C D DPLD+L++ Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D    H NDI ELPPH   E++ FFED
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFFED 140          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_METKA (Inorganic pyrophosphatase OS=Methanopyrus kandleri GN=ppa PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 2
Query:  281 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 688
            W DLE GP  P +   VIEI +GS+ KYE D++ G   +DRVLYS   YP +YGFIPRTL +D DPLD+L+IMQ+P  PGC + A+ IGLM M+D  ++DDK++AV  +DP ++   D+ ++P H L EI   F +
Sbjct:    5 WKDLEPGPNPPDVVYAVIEIPRGSRNKYEYDEERGFFKLDRVLYSPFHYPLDYGFIPRTLYDDGDPLDILVIMQDPTFPGCVIEARPIGLMKMLDDSDQDDKVLAVPTEDPRFKDVKDLDDVPKHLLDEIAHMFSE 140          
The following BLAST results are available for this feature:
BLAST of FC930598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
IPYR_SOLTU1.660e-7989.10Soluble inorganic pyrophosphatase OS=Solanum tuber... [more]
IPYR_MAIZE1.076e-7881.18Soluble inorganic pyrophosphatase OS=Zea mays GN=I... [more]
IPYR_ORYSJ9.109e-7880.23Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_ORYSI9.109e-7880.23Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR2_ARATH1.361e-7382.47Soluble inorganic pyrophosphatase 2 OS=Arabidopsis... [more]
IPYR_HORVD2.034e-6978.05Soluble inorganic pyrophosphatase OS=Hordeum vulga... [more]
IPYR2_CHLRE1.119e-5972.73Soluble inorganic pyrophosphatase 2 OS=Chlamydomon... [more]
IPYR_LEPIN3.615e-4256.52Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_LEPIC3.615e-4256.52Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_METKA1.738e-3650.00Inorganic pyrophosphatase OS=Methanopyrus kandleri... [more]

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Properties
Property NameValue
Genbank descriptionC34009C05EF PostHarvC1 Citrus clementina cDNA clone C34009C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930598 ID=FC930598; Name=FC930598; organism=Citrus clementina; type=EST; length=756bp
GCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTGTATCCTTTCT
ANCATTTATAATGGAAGCATATGTTTTATTTGTGAATTGCCCTTTCTTTC
CTTGAT
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