FC930631

Overview
NameFC930631
Unique NameFC930631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15190 contig Ccv1_Contig15190:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 406.371 bits (1043), Expect = 7.863e-113
Identity = 199/235 (84.68%), Postives = 218/235 (92.77%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            +E KAVLR+IRGTD +EPEF +L+EASR+AKEVKHPFRNLL+RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLF TLGFG  ASLYS V+TGAVNVLSTLVSIYSVDKVGRR+LLLEAG+QMF SQ VIAIILG+KV D S +L  GFA+LVV+MICT+++AFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTF+IAQAFLSMLCHFKFGIF+FFS WVLIMS FV F
Sbjct:  237 DEGKAVLRRIRGTDNVEPEFADLLEASRLAKEVKHPFRNLLQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSDASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCHFKFGIFIFFSAWVLIMSVFVMF 471          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.018e-84
Identity = 146/235 (62.13%), Postives = 191/235 (81.28%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            E  + VL K+RGT+ +  E  ++V+AS +A  +KHPFRN+L++R+RPQLV+A+ + +FQ  TGIN+I+FYAPVLF+T+GFGG+ASLYS+ +TGAV VLST +SI  VD++GRR LL+  GIQM + Q ++A+ILG+K  D+ E L  G++V+VVI IC F+ AF WSWGPLGW IPSE FPLETRSAGQS+TV VNLLFTF+IAQAFL +LC FKFGIFLFF+GWV +M+ FV+F
Sbjct:  238 ERGRRVLVKLRGTENVNAELQDMVDASELANSIKHPFRNILQKRHRPQLVMAICMPMFQILTGINSILFYAPVLFQTMGFGGNASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQE-LSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTIFVYF 471          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.562e-81
Identity = 142/234 (60.68%), Postives = 186/234 (79.49%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            E+ + VL KIRGT  ++ EF ++++AS +A  +KHPFRN+L++RNRPQLV+A+ +  FQ  TGIN I+FYAP LF+++GFGG+A+LYS+ +TGAV   ST +SI +VD++GRR LL+  GIQM   Q ++AIILG+K  D ++ L   F+VLVVIMIC F+ AF WSWGPLGW +PSE FPLETRSAGQS+TV VNL FTFVIAQ+F S+LC FKFGIFLFF+GWV +M+ FV+
Sbjct:  238 EKGRNVLEKIRGTKHVDAEFQDMLDASELANSIKHPFRNILEKRNRPQLVMAIFMPTFQILTGINIILFYAPPLFQSMGFGGNAALYSSAVTGAVLCSSTFISIATVDRLGRRFLLISGGIQMITCQVIVAIILGVKFGD-NQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSFPSLLCAFKFGIFLFFAGWVTVMTAFVY 470          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.073e-77
Identity = 140/237 (59.07%), Postives = 179/237 (75.53%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK--VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            EE +A L+++RG + ++ EF +LV AS  +K+V+HP+RNLL+R+ RP L +A+A+  FQQ TGIN IMFYAPVLF T+GFG  A+L S VITG VNV +T+VSIY VDK GRR L LE G+QM + Q ++A  +G K  V     DL   +AV+VV+ IC ++S FAWSWGPLGWL+PSE FPLE RSA QSV V VN+ FTFV+AQ FL MLCH KFG+F+FFS +VLIMS FV++
Sbjct:  238 EEARAHLKRVRGVEDVDEEFTDLVHASEDSKKVEHPWRNLLQRKYRPHLSMAIAIPFFQQLTGINVIMFYAPVLFDTIGFGSDAALMSAVITGLVNVFATMVSIYGVDKWGRRFLFLEGGVQMLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVSGFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKFGLFIFFSFFVLIMSIFVYY 474          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 4.218e-74
Identity = 135/236 (57.20%), Postives = 175/236 (74.15%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK--VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            EE K  LR+IRG D +  EF +LV AS+ ++ ++HP+RNLL+R+ RP L +AV +  FQQ TGIN IMFYAPVLF T+GF   ASL S V+TG+VNV +TLVSIY VD+ GRR L LE G QM + Q V+A  +G K  V     +L   +A++VV  IC +++ FAWSWGPLGWL+PSE FPLE RSA QS+TV VN++FTF+IAQ FL+MLCH KFG+FL F+ +V++MS FV+
Sbjct:  236 EEAKTKLRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNLLRRKYRPHLTMAVMIPFFQQLTGINVIMFYAPVLFNTIGFTTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFGLFLVFAFFVVVMSIFVY 471          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 4.218e-74
Identity = 139/236 (58.90%), Postives = 178/236 (75.42%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVI-AVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            E+ KAVL K+RGT+ IE EF +LVEAS  A+ VK+PFRNLL RRNRPQLVI A+ L  FQQ TG+N+I+FYAPV+F++LGFGGSASL S+ IT A  V++ ++S+YS DK GRR LLLEA ++MF    V+ + L +K  +  E L     +++V++IC F+ A+  SWGP+GWL+PSE FPLETRSAGQSV VCVNL FT +IAQ FL  LCH K+GIFL F+G +L M  FV+F
Sbjct:  238 EKAKAVLIKVRGTNNIEAEFQDLVEASDAARAVKNPFRNLLARRNRPQLVIGAIGLPAFQQLTGMNSILFYAPVMFQSLGFGGSASLISSTITNAALVVAAIMSMYSADKFGRRFLLLEASVEMFCYMVVVGVTLALKFGEGKE-LPKSLGLILVVLICLFVLAYGRSWGPMGWLVPSELFPLETRSAGQSVVVCVNLFFTALIAQCFLVSLCHLKYGIFLLFAGLILGMGSFVYF 472          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.509e-74
Identity = 136/237 (57.38%), Postives = 176/237 (74.26%), Query Frame = 3
Query:    3 FEETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK--VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            F   +A LRKIRG D I+ E  +L+ AS  +K V+HP+RNLL+R+ RP L +A+ +  FQQ TGIN IMFYAPVLF+T+GFG  A+L S V+TG VNV +T+VSIY VDK GRR L LE G QM +SQ  +A  +G K  V      L   +A++VV+ IC +++AFAWSWGPLGWL+PSE FPLE RSA QS+TV VN++FTF+IAQ FL MLCH KFG+F+FF+ +V++MS FV+
Sbjct:  233 FRLAEAKLRKIRGVDDIDDEINDLIIASEASKLVEHPWRNLLQRKYRPHLTMAILIPAFQQLTGINVIMFYAPVLFQTIGFGSDAALISAVVTGLVNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFGLFIFFAFFVVVMSIFVY 469          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.396e-74
Identity = 125/235 (53.19%), Postives = 178/235 (75.74%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            E  K +L+++RGT  ++ E  +L++AS I++ ++HPF+N+++R+ RPQLV+AVA+  FQQ TGIN I FYAP+LF+T+G   SASL S+++TG V   ST +S+  VDK+GRR L +  G+QMF++Q ++  I+  ++ DH   +  G+A +V+I+IC +++ F WSWGPLGWL+PSE FPLE RSAGQS+ V V+ LFTFV+AQ FLSMLCHFK GIF FF GWV++M+ FV F
Sbjct:  236 ERAKLMLQRVRGTTDVQAELDDLIKASIISRTIQHPFKNIMRRKYRPQLVMAVAIPFFQQVTGINVIAFYAPILFRTIGLEESASLLSSIVTGLVGSASTFISMLIVDKLGRRALFIFGGVQMFVAQIMVGSIMAAELGDHG-GIGKGYAYIVLILICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSIVVAVSFLFTFVVAQTFLSMLCHFKSGIFFFFGGWVVVMTAFVHF 469          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.227e-73
Identity = 138/235 (58.72%), Postives = 170/235 (72.34%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            EE K  LRKIRG D I  E+  +V A  IA +VK P+R LLK  +RP  +I + LQ+FQQ TGINAIMFYAPVLF+T+GFG  A+L S VITG++NVL+T V IY VD+ GRR LLL++ + M + Q +I IIL  K    +  L    A++VVI +C ++  FAWSWGPLGWLIPSETFPLETRSAG +V V  N+ FTFVIAQAFLSMLC  + GIF FFSGW+++M  F FF
Sbjct:  232 EEGKEALRKIRGVDDINDEYESIVHACDIASQVKDPYRKLLKPASRPPFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSDAALLSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIGIILA-KDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSMLCGMRSGIFFFFSGWIIVMGLFAFF 465          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.571e-73
Identity = 135/236 (57.20%), Postives = 172/236 (72.88%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGF-AVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            E+ K +L+KIRGT ++E EF EL  A   AK+VKHP+ N+++ R RPQL     +  FQQ TGIN IMFYAPVLFKT+GFG  ASL S VITG VNVLST+VSIYSVDK GRR L L+ G QM ++Q  +  ++G K   + E   +G  A +++ +IC +++ FAWSWGPLGWL+PSE  PLE RSAGQS+ V VN+ FTF I Q FL+MLCH KFG+F FF+G VLIM+ F++F
Sbjct:  238 EKAKEMLQKIRGTMEVEHEFNELCNACEAAKKVKHPWTNIMQARYRPQLTFCTFIPFFQQLTGINVIMFYAPVLFKTIGFGNDASLISAVITGLVNVLSTIVSIYSVDKFGRRALFLQGGFQMIVTQIAVGSMIGWKFGFNGEGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSEICPLEIRSAGQSLNVSVNMFFTFFIGQFFLTMLCHMKFGLFYFFAGMVLIMTIFIYF 473          
The following BLAST results are available for this feature:
BLAST of FC930631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
STP13_ARATH7.863e-11384.68Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
STP7_ARATH2.018e-8462.13Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
STA_RICCO3.562e-8160.68Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
STC_RICCO1.073e-7759.07Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
STP1_ARATH4.218e-7457.20Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
STP14_ARATH4.218e-7458.90Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
STP12_ARATH5.509e-7457.38Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
HEX6_RICCO9.396e-7453.19Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
STP6_ARATH1.227e-7358.72Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
STP11_ARATH3.571e-7357.20Sugar transport protein 11 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC34009F03EF PostHarvC1 Citrus clementina cDNA clone C34009F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930631 ID=FC930631; Name=FC930631; organism=Citrus clementina; type=EST; length=712bp
GTTTCGAAGAAACGAAGGCCGTGCTCAGAAAGATTAGGGGCACTGACAAG
ATTGAACCTGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTATAGCCAAAGA
AGTAAAGCACCCTTTCAGAAATCTGCTCAAGCGTAGGAACCGGCCCCAGC
TTGTCATTGCTGTTGCCTTGCAGATCTTCCAGCAGTGTACAGGAATCAAT
GCGATCATGTTTTATGCCCCAGTCCTGTTTAAAACGTTGGGATTTGGCGG
CAGTGCTTCTCTTTACTCAACTGTGATTACAGGGGCAGTTAACGTCCTCT
CAACACTAGTATCAATCTACTCGGTGGACAAAGTGGGACGTCGGATGCTA
TTACTCGAAGCTGGAATTCAAATGTTCTTGTCTCAGACTGTGATAGCAAT
CATACTTGGAATTAAGGTTAAGGATCACTCGGAAGATTTACACACTGGCT
TTGCCGTCCTAGTGGTTATTATGATTTGCACTTTCATCTCTGCCTTTGCT
TGGTCTTGGGGACCTCTCGGATGGCTGATTCCCAGCGAAACATTCCCGTT
AGAGACGCGATCAGCTGGACAGAGTGTTACTGTTTGTGTGAACTTGCTGT
TCACTTTTGTGATAGCTCAGGCATTCCTTTCAATGCTCTGCCATTTCAAG
TTCGGCATCTTCTTGTTCTTCTCCGGTTGGGTTTTGATCATGTCATGCTT
TGTGTTTTTCTT
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