FC930638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 7.097e-81 Identity = 136/220 (61.82%), Postives = 170/220 (77.27%), Query Frame = 1 Query: 1 DLPDTSFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIHKGKKSCSPDFKASIAGHCDLLIKD 660 DLP+ VR ESRMDLLRAVI+GAEGTPYHDGLFFFD+ FP YP+VPPNVHYHSGGLR+NPNLYNCGKVCLSLL TW G EKW+P+ STMLQ+LVSIQALILNE+PYFNEPG+ GE +S +Y+E F+LSLKTM+Y++RRPP+HF ++V H++ R+HDI+ AC AY GA +GS+VKG VQ + + ++S S FK +A ++ + Sbjct: 286 DLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGESKSKVYSENVFLLSLKTMVYSIRRPPQHFEEYVQNHYFVRSHDIVKACNAYKAGAPLGSMVKGGVQDLEEARQSGSKKFKTDVASFMQTVVDE 505
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBC25_ARATH (Probable ubiquitin carrier protein E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.338e-79 Identity = 138/211 (65.40%), Postives = 159/211 (75.36%), Query Frame = 1 Query: 1 DLPDTSFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIHKGKKSCSPDFKASIA 633 DLP+ FVR YESRMDLLRAVI+GA+GTPYHDGLFFFD+FFP YP+ PP VHYHSGGLR+NPNLYNCGKVCLSLL TW G++ EKWIP+ STMLQVLVSIQ LILN++PYFNEPG+E GE S Y+E FILSLKTM+YT+RRPPK+F DF GHF+ AHD+L AC AY +GA G LVKG S F+ +A Sbjct: 347 DLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENTFILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNAYRNGATPGYLVKGAPDVEENSAGMSSLKFRTDVA 557
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBC23_ARATH (Probable ubiquitin carrier protein E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.201e-65 Identity = 123/212 (58.02%), Postives = 146/212 (68.87%), Query Frame = 1 Query: 1 DLPDTSFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVK-GRVQKIHKGKKSCSPDFKASIA 633 +LPD FVR YE RMDLLRAVIVGA GTPY DGLFFFD PSDYP+VPP+ +YHSGG RLNPNLY GKVCLSLLNTW G NE W P S++LQVLVS+Q L+LN +PYFNE G++ EGE+ S YNE F+L+ KTM+Y +R+PPK F + + HF +R + IL AC AYM G +GSL K V S S FK +A Sbjct: 865 NLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLGYNENTFLLNCKTMMYLMRKPPKDFEELIKDHFRKRGYYILKACDAYMKGYLIGSLTKDASVIDERSSANSTSVGFKLMLA 1076
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBC24_ARATH (Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana GN=UBC24 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.709e-64 Identity = 112/186 (60.22%), Postives = 138/186 (74.19%), Query Frame = 1 Query: 1 DLPDTSFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGS 558 +LP+T +VRV E RMDLLRA +VGA GTPYHDGLFFFD+ P YP+ PP VHYHSGG+RLNPNLY G+VCLSLLNTW G E W S++LQ+L+S QAL+LNE+PYFNE G++ EGE+ S YNE AF+++ K+M+ +R+PPKHF V HF RA +LAACKAYM+G VGS Sbjct: 677 NLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLNEKPYFNEAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQHVLAACKAYMEGVPVGS 862
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.940e-39 Identity = 81/177 (45.76%), Postives = 110/177 (62.15%), Query Frame = 1 Query: 19 FVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLK-TMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYM 537 FVR E R+D+++ +I G TPY +G F FDV+FP DYP+ PP V+ + G +R NPNLYN GKVCLS+LNTW G EKW P S+ LQVLVS+Q+LIL PYFNEPG+E G + S Y+ ++K ML +R P F + + HFY + +I+A C+ ++ Sbjct: 4570 FVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQCEEWI 4746
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBE2O_MOUSE (Ubiquitin-conjugating enzyme E2 O OS=Mus musculus GN=Ube2o PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.267e-37 Identity = 82/164 (50.00%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 4 LPDTSFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSG-GLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHF 492 LPD V+ +E RMDL A+I G TPY DGL+ FD+ P+ YP VPP+ Y S RLNPNLY+ GKVC+SLL TW G E+W S S++LQVL+SIQ LIL PY+NE G++S ++EG S YNE A I +++M VRRPP+ F + HF Sbjct: 966 LPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1128
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBE2O_HUMAN (Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens GN=UBE2O PE=1 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 3.687e-37 Identity = 81/164 (49.39%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 4 LPDTSFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSG-GLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHF 492 LP+ V+ +E RMDL A+I G TPY DGL+ FD+ P+ YP VPP+ Y S RLNPNLY+ GKVC+SLL TW G E+W S S++LQVL+SIQ LIL PY+NE G++S ++EG S YNE A I +++M VRRPP+ F + HF Sbjct: 969 LPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1131
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBC3_MIMIV (Probable ubiquitin-conjugating enzyme E2 R521 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R521 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.399e-33 Identity = 72/180 (40.00%), Postives = 104/180 (57.78%), Query Frame = 1 Query: 61 VIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHS---GGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLK-TMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIH 588 +I G E +PY G F F ++ PS YPN P V + G +R NPNLY GKVCLS+L TW G E WIP +S+MLQV++SIQ+L+L PYFNEPG+ES ++G + S YN++ +K M+ ++ P F + HF +A I C+ +++ A + K QK++ Sbjct: 1252 IITGPEDSPYDSGCFHFRMYNPSAYPNTSPFVSMTTTGHGSVRFNPNLYADGKVCLSILGTWRGQAGESWIPGVSSMLQVMISIQSLVLISEPYFNEPGYESSRGTDKGNKLSTEYNQKVRFNCMKWAMIDVIKNPVPGFESMIKKHFSIKAPHIKQVCQTWINEAPDNN--KSEYQKLY 1429
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 34 ESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHY---HSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALI 315 E R+D+++ +I G + TPY +GLF FD+FFP+ YP PP + SG +R NPNLYN GK+CLS+L TW+G EKW P S ++QVLVSIQ +I Sbjct: 439 EGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCS-LMQVLVSIQEVI 534
BLAST of FC930638 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 58/136 (42.65%), Postives = 69/136 (50.74%), Query Frame = 1 Query: 7 PDTSFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 405 P FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 75 PPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-LSSVLISIQSL-MTENPYHNEPGFE----QERHSGDSKNYNE 201 The following BLAST results are available for this feature:
BLAST of FC930638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930638 ID=FC930638; Name=FC930638; organism=Citrus clementina; type=EST; length=671bpback to top |