FC930645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_SYNY3 (Lysyl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=lysS PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48 Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 3 Query: 207 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 707 E +RA R++K E+LR GL PYAY W+ TH A LQE YR L+NGEE + + V+ GKLAF TL+D+SGTIQLY EK+RL L + F+ LK D+GDILGV+G++KRTEKGELSV V ++ +LTKSLLPLPDK+HGLTD +KRYRQRYVD+I P V Sbjct: 11 EEIRATRLEKAEQLRQLGLNPYAYTWEITHQAQDLQETYRDLSNGEEVDLK---VAIAGRILARRVMGKLAFFTLQDESGTIQLYLEKQRLTEHMPELENAFNLLKKITDVGDILGVTGTLKRTEKGELSVYVQTYAVLTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPTV 180
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_THEEB (Lysyl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=lysS PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.807e-48 Identity = 97/171 (56.73%), Postives = 123/171 (71.93%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQ----FDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 713 +RA RI+K + L+++G+ PYAY+W+RTH+A LQ+ Y HLA GE + D VS FGKLAF TL+DDSGTIQLY +K+ + F LK D+GDILG G++KRTEKGELSV+V S+ +LTKSLLPLPDK+HGLTDV+KRYRQRYVD+I P+V D Sbjct: 11 IRATRIEKAKTLQAQGMSPYAYRWERTHTAALLQDKYAHLAAGE---AVGDRVSVAGRIMARRIFGKLAFFTLQDDSGTIQLYLDKQTISQTMGEAAFADLKHLTDVGDILGAVGTLKRTEKGELSVVVESYTMLTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPQVRD 178
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_NOSP7 (Lysyl-tRNA synthetase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=lysS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.378e-47 Identity = 99/174 (56.90%), Postives = 122/174 (70.11%), Query Frame = 3 Query: 207 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 707 E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + LA+GEE + E V+ FGKLAF TL+D++GTIQLY +K R+ +D F+ LK D GDILGV G++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEQFADLASGEEVDLE---VAIAGRIMARRVFGKLAFFTLQDETGTIQLYLDKNRIQESMADIDADAFNHLKQLTDAGDILGVKGTIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEV 174
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_ANAVT (Lysyl-tRNA synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=lysS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.378e-47 Identity = 97/174 (55.75%), Postives = 121/174 (69.54%), Query Frame = 3 Query: 207 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 707 E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + L +GEE ++E V+ FGKLAF TL D++GTIQLY EK R+ +D F+ LK D+GDILG G++KRTEKGELS+ V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLTSGEEVDTE---VAIAGRIMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAETDADAFNHLKQLTDVGDILGAKGTIKRTEKGELSIYVKEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEV 174
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_ANASP (Lysyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=lysS PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.284e-46 Identity = 97/174 (55.75%), Postives = 120/174 (68.97%), Query Frame = 3 Query: 207 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 707 E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + L +GEE +E V+ FGKLAF TL D++GTIQLY EK R+ ++ F+ LK D+GDILG G++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLTSGEEVETE---VAIAGRIMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAEIDANAFNHLKQLTDVGDILGAKGTIKRTEKGELSVYVKEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEV 174
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_SYNP6 (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=lysS PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.735e-46 Identity = 97/174 (55.75%), Postives = 120/174 (68.97%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 713 +RA R++K +LR G EPYAY+WD +HSA QLQ +Y L GEE E V+ FGKLAF TL+D+SG IQLY EK+RL ++ F LK D+GDILGV GS++RTEKGELS+ V+ + ILTKSL PLPDK+HGLTDV+KRYRQRYVD+I PEV + Sbjct: 4 LRATRLEKALQLRELGFEPYAYRWDCSHSAAQLQALYADLPAGEEVAVE---VAIAGRIMARRVFGKLAFFTLQDESGQIQLYLEKQRLSESMAAIDAEAFSHLKALTDVGDILGVKGSVRRTEKGELSIAVDQYAILTKSLQPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRE 174
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_SYNE7 (Lysyl-tRNA synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=lysS PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.735e-46 Identity = 97/174 (55.75%), Postives = 120/174 (68.97%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 713 +RA R++K +LR G EPYAY+WD +HSA QLQ +Y L GEE E V+ FGKLAF TL+D+SG IQLY EK+RL ++ F LK D+GDILGV GS++RTEKGELS+ V+ + ILTKSL PLPDK+HGLTDV+KRYRQRYVD+I PEV + Sbjct: 4 LRATRLEKALQLRELGFEPYAYRWDCSHSAAQLQALYADLPAGEEVAVE---VAIAGRIMARRVFGKLAFFTLQDESGQIQLYLEKQRLSESMAAIDAEAFSHLKALTDVGDILGVKGSVRRTEKGELSIAVDQYAILTKSLQPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRE 174
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_GLOVI (Lysyl-tRNA synthetase OS=Gloeobacter violaceus GN=lysS PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.577e-36 Identity = 79/173 (45.66%), Postives = 109/173 (63.01%), Query Frame = 3 Query: 207 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLL----SDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 713 E +R R++K E+ R PY Y+++RTH A LQ Y+ L NG+E D VS G +AF L+DDSGTIQLY +K+R+ +D F L D GD +G G+++RTE+GELSV V+ + +L KS+LPLP +Y+GLTDV KRYRQRY+D+I+ P V + Sbjct: 4 EDLRRTRLEKAEQWRVHNQNPYPYRYERTHMAGDLQAKYKDLENGQEVE---DAVSVAGRIVARRVLGSVAFFGLQDDSGTIQLYFDKKRIRESMGADAFKWLDKLTDTGDFIGAHGTIRRTERGELSVYVHEYELLCKSILPLPSEYYGLTDVQKRYRQRYLDLIANPGVRE 173
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_SYNS3 (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain CC9311) GN=lysS PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34 Identity = 79/164 (48.17%), Postives = 107/164 (65.24%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 704 +R R++K L+ +G EPYA ++D T +LQ + LA G E + + VS GKLAF TL D++GTIQL+ EK L D F QL VD GD++GV G ++RT++GELSV V+ + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ Sbjct: 4 LRETRLEKANALKEQGQEPYALRFDLTDRMARLQADHADLAKGAERDLK---VSVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKATL-GDSFAQLSSLVDAGDLIGVHGILRRTDRGELSVKVSKWEMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQ 163
BLAST of FC930645 vs. ExPASy Swiss-Prot
Match: SYK_SYNPW (Lysyl-tRNA synthetase OS=Synechococcus sp. (strain WH7803) GN=lysS PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = 3 Query: 213 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 704 +R R++KV LR +G EPYA +D + +LQ + L GEE + V+ GKLAF TL D++GTIQL+ EK L + F Q+ VD GD++GV G+++RT++GELSV V + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ Sbjct: 4 LRETRLEKVSALRDQGREPYALTFDPSDRMARLQSDHADLPKGEERDCA---VAVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKAAL-GEAFAQITSLVDAGDLIGVRGTLRRTDRGELSVKVAEWTMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQ 163 The following BLAST results are available for this feature:
BLAST of FC930645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930645 ID=FC930645; Name=FC930645; organism=Citrus clementina; type=EST; length=716bpback to top |