FC930647

Overview
NameFC930647
Unique NameFC930647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15122 contig Ccv1_Contig15122:54..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.522e-96
Identity = 150/195 (76.92%), Postives = 165/195 (84.62%), Query Frame = 2
Query:  128 LLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKGTVAVG 712
            ++SKEAVAPYERPALSKAYLFPEG ARLPGFHVCVGSGGER LPEWY EKGI LILSTEIV+AD+ASKTL+SA G  FKYQ LVIATG+TVL+L+DFGV+GAD+KNIFYLREIDDAD+LVE                YIGLELSA L++NNI+V+MVYPEPWCMPRLFT  IAAFYEGYY NKG  IIKGTVAVG
Sbjct:   36 IISKEAVAPYERPALSKAYLFPEGAARLPGFHVCVGSGGERQLPEWYAEKGISLILSTEIVKADLASKTLVSAAGESFKYQTLVIATGTTVLKLSDFGVQGADSKNIFYLREIDDADQLVEALKAKKNGKAVVVGGGYIGLELSAVLRLNNIEVNMVYPEPWCMPRLFTEGIAAFYEGYYKNKGVNIIKGTVAVG 230          

HSP 2 Score: 72.4034 bits (176), Expect = 1.522e-96
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1
Query:   22 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAI 129
            MAEKSFKYVI+GGGVSAGYAAREFAKQGVKPGELAI
Sbjct:    1 MAEKSFKYVIVGGGVSAGYAAREFAKQGVKPGELAI 36          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 1.996e-93
Identity = 150/202 (74.26%), Postives = 165/202 (81.68%), Query Frame = 2
Query:  107 LSQASWQLLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKGTVAVG 712
            L+     ++SKEAVAPYERPALSKAYLFPE  ARLPGFHVCVGSGGERLLP+WYKEKGIELILSTEIV AD+ +K L SA G I+ YQ L+IATGSTV++L+DFGV+GADAKNIFYLREIDDAD+LVE                YIGLEL AAL+INN DVSMVYPEPWCMPRLFT +IAAFYEGYYA KG  IIKGTVAVG
Sbjct:   29 LNPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHVCVGSGGERLLPDWYKEKGIELILSTEIVEADLPAKRLRSAHGKIYNYQTLIIATGSTVIKLSDFGVQGADAKNIFYLREIDDADQLVEAIKAKENGKVVVVGGGYIGLELGAALRINNFDVSMVYPEPWCMPRLFTPEIAAFYEGYYAQKGITIIKGTVAVG 230          

HSP 2 Score: 63.929 bits (154), Expect = 1.996e-93
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 1
Query:   22 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAI 129
            MA+++FKYVILGGGV+AGYAAREF KQG+ PGELAI
Sbjct:    1 MADETFKYVILGGGVAAGYAAREFVKQGLNPGELAI 36          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 3.411e-90
Identity = 146/195 (74.87%), Postives = 160/195 (82.05%), Query Frame = 2
Query:  128 LLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKGTVAVG 712
            ++SKEAVAPYERPALSKAYLFPE  ARLPGFH CVGSGGERLLPEWY EKGI+L LSTEIV AD+A+K L SA G  F YQ LVIATGS V+RLTDFGV GA+AKNIFYLRE+DDADKL E                YIGLELSA LK+N++DV+MVYPEPWCMPRLFT++IAAFYEGYYANKG  IIKGTVAVG
Sbjct:   35 IISKEAVAPYERPALSKAYLFPESPARLPGFHTCVGSGGERLLPEWYSEKGIQLYLSTEIVSADLAAKFLKSANGEHFDYQTLVIATGSAVIRLTDFGVIGANAKNIFYLREVDDADKLYEAIKRKKNAKRVVVGGGYIGLELSAVLKLNDLDVTMVYPEPWCMPRLFTSEIAAFYEGYYANKGINIIKGTVAVG 229          

HSP 2 Score: 61.2326 bits (147), Expect = 3.411e-90
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 1
Query:   34 SFKYVILGGGVSAGYAAREFAKQGVKPGELAI 129
            SFKY+I+GGGVSAGYAAREF KQGV PGELAI
Sbjct:    4 SFKYIIIGGGVSAGYAAREFVKQGVHPGELAI 35          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDAR4_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 4 OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 4.098e-82
Identity = 129/195 (66.15%), Postives = 150/195 (76.92%), Query Frame = 2
Query:  128 LLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKGTVAVG 712
            ++S+E V PYERPALSK Y+  E  A LP F+V  G GGER  P+WYKEKGIELIL TEIV+AD+A+KTL+S TG +FKYQ L+ ATGS+V+RL+DFGV GADAKNIFYLRE++DAD L                  YIGLEL AALK NN+DV+MVYPEPWCMPRLFTA IA+FYEGYYANKG  I+KGTVA G
Sbjct:   37 IISREQVPPYERPALSKGYIHLENKATLPNFYVAAGIGGERQFPQWYKEKGIELILGTEIVKADLAAKTLVSGTGQVFKYQTLLAATGSSVIRLSDFGVPGADAKNIFYLRELEDADYLAYAMETKEKGKAVVVGGGYIGLELGAALKANNLDVTMVYPEPWCMPRLFTAGIASFYEGYYANKGINIVKGTVASG 231          

HSP 2 Score: 63.5438 bits (153), Expect = 4.098e-82
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   28 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAI 129
            EKSFKYVI+GGGV+AGYAAREF  QGVKPGELAI
Sbjct:    4 EKSFKYVIVGGGVAAGYAAREFFNQGVKPGELAI 37          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.348e-80
Identity = 148/195 (75.90%), Postives = 167/195 (85.64%), Query Frame = 2
Query:  128 LLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKGTVAVG 712
            ++SKEAVAPYERPALSK YLFPEG ARLPGFH CVGSGGE+LLPE YK+KGIELILSTEIV+AD+++K+L+SATG +FKYQ L+IATGSTVLRLTDFGV+GAD+KNI YLREIDDADKLVE                YIGLELSA L+INN+DV+MV+PEPWCMPRLFTADIAAFYE YY NKG +IIKGTVA G
Sbjct:   36 VISKEAVAPYERPALSKGYLFPEGAARLPGFHCCVGSGGEKLLPESYKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLTDFGVKGADSKNILYLREIDDADKLVEAIKAKKGGKAVVVGGGYIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASG 230          

HSP 2 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:   22 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAITLQRSGCSV*ASST*QGISFP*GNC*TSRFPC 225
            MAEKSFKY+ILGGGVSAGYAA+EFA QGV+PGELA+  + +       +  +G  FP G      F C
Sbjct:    1 MAEKSFKYIILGGGVSAGYAAKEFANQGVQPGELAVISKEAVAPYERPALSKGYLFPEGAARLPGFHC 68          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDAR1_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=At3g09940 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.988e-67
Identity = 107/196 (54.59%), Postives = 142/196 (72.45%), Query Frame = 2
Query:  128 LLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKL-VEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKGTVAVG 712
            ++SKE V P+ERP L+K Y+  E    L   +VC G+G  +  P WYKEKGI+LI+ TEIV+AD+ASKTL+S  G I+KYQ L+IATGST +RL++ GV+ AD KNIFYLREI+D+D+L +                 ++GLE+S+AL+ NN +V+MV+PEPW + R FTA+IA+FYE YYANKG +IIKGTVA G
Sbjct:   37 IISKEPVPPFERPELTKVYIDLEVNPTLANIYVCAGTGEAKQYPNWYKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSEIGVQEADVKNIFYLREIEDSDELALAMELYVQRGKAVIIGGGFLGLEISSALRANNHEVTMVFPEPWLVHRFFTAEIASFYESYYANKGIKIIKGTVATG 232          

HSP 2 Score: 61.2326 bits (147), Expect = 8.988e-67
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   28 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAI 129
            EKS+KYVI+GGGV+ GYAAREF+ QG+KPGELAI
Sbjct:    4 EKSYKYVIIGGGVAGGYAAREFSNQGLKPGELAI 37          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDAR2_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.087e-53
Identity = 102/201 (50.75%), Postives = 135/201 (67.16%), Query Frame = 2
Query:  101 RVLSQASWQLLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKGTV 703
            R +S     ++S+E VAPYERPALSK +L PE  ARLP FH CVG+  E+L P+WYK+ GIEL+L T +   D+  KTLLS+TG    Y+ L+IATG+  L+L +FGVEG+DA+N+ YLR++ DA++L                  YIG+E +A+L IN I+V+MV+PE  CM RLFT  IA+ YE YY  KG + IKGTV
Sbjct:   26 RGVSDGELCIISEEPVAPYERPALSKGFLLPEAPARLPSFHTCVGANDEKLTPKWYKDHGIELVLGTRVKSVDVRRKTLLSSTGETISYKFLIIATGARALKLEEFGVEGSDAENVCYLRDLADANRLATVIQSSSNGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASLYEDYYRAKGVKFIKGTV 226          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 2.779e-43
Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 2
Query:  128 LLSKEAVAPYERPALSKAYLFP--EGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGNQIIKG 697
            +++KEA APYERPAL+KAYLFP  +  ARLPGFH CVG GGER  P+WYKEKGIE+I    +  AD   +TL +  G   KY  L+IATG T  R  D    G     + Y+RE+ DAD L+                 YIG+E++AA    N+D ++V+PE   + RLFT  +A  YE  Y   G + +KG
Sbjct:   91 IVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTCVGGGGERQTPDWYKEKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPD--KIGGHLPGVHYIREVADADSLI--ASLGKAKKIVIVGGGYIGMEVAAAAVAWNLDTTIVFPEDQLLQRLFTPSLAQKYEELYRQNGVKFVKG 278          

HSP 2 Score: 40.0466 bits (92), Expect = 2.779e-43
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 1
Query:   19 SMAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAITLQRS 144
            S A ++ ++VI+GGG +AGYAAR F + G+  G L I  + +
Sbjct:   55 SFANENREFVIVGGGNAAGYAARTFVENGMADGRLCIVTKEA 96          
BLAST of FC930647 vs. ExPASy Swiss-Prot
Match: RURE_PSEOL (Rubredoxin-NAD(+) reductase OS=Pseudomonas oleovorans GN=alkT PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = 2
Query:  125 QLLSKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE-WYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDAD----KLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFT 634
            ++ S+E+VAPY+RP LSKA+L  E           +      L PE +Y    I + L+T IV  D+  K + S  G  + Y+ L++AT ++  RLT    EG++   + YLR ++DA     KLVE                 IGLE+++A       V+++   P  M R+ T
Sbjct:   29 RIFSRESVAPYQRPPLSKAFLTSE-----------IAESAVPLKPEGFYTNNNITISLNTPIVSIDVGRKIVSSKDGKEYAYEKLILATPASARRLT---CEGSELSGVCYLRSMEDAKNLRRKLVE------SASVVVLGGGVIGLEVASAAVGLGKRVTVIEATPRVMARVVT 183          
The following BLAST results are available for this feature:
BLAST of FC930647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MDAR_SOLLC1.522e-9676.92Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDARS_CUCSA1.996e-9374.26Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR_PEA3.411e-9074.87Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
MDAR4_ARATH4.098e-8266.15Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR3_ARATH1.348e-8075.90Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR1_ARATH8.988e-6754.59Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR2_ARATH4.087e-5350.75Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARP_ARATH2.779e-4344.79Monodehydroascorbate reductase, chloroplastic OS=A... [more]
RURE_PSEOL2.963e-1131.43Rubredoxin-NAD(+) reductase OS=Pseudomonas oleovor... [more]
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Properties
Property NameValue
Genbank descriptionC34009G07EF PostHarvC1 Citrus clementina cDNA clone C34009G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930647 ID=FC930647; Name=FC930647; organism=Citrus clementina; type=EST; length=714bp
GGAACTTTTTTCGATCGATCAATGGCGGAGAAGAGCTTCAAGTACGTGAT
CCTCGGTGGCGGTGTCTCTGCTGGATATGCAGCTAGGGAGTTTGCTAAGC
AGGGTGTTAAGCCAGGCGAGCTGGCAATTACTCTCCAAAGAAGCGGTTGC
TCCGTATGAGCGTCCAGCACTTAGCAAGGCATATCTTTTCCCTGAGGGAA
CTGCTAGACTTCCCGGTTTCCATGTCTGTGTTGGAAGTGGTGGAGAGAGA
CTGCTTCCTGAGTGGTACAAAGAGAAAGGAATCGAATTGATCCTCAGCAC
GGAAATAGTCAGAGCAGATATTGCTTCCAAGACTCTCCTTAGTGCAACTG
GGCTTATCTTTAAGTACCAGATTTTAGTAATTGCAACTGGTTCTACAGTT
TTACGGTTGACTGATTTTGGTGTTGAAGGTGCTGATGCCAAAAATATCTT
CTACTTAAGAGAAATTGATGATGCTGATAAGCTGGTTGAAGCAATAAAAG
CAAAGAAGAATGGGAAGGCAGTGGTTGTTGGAGGAGGATACATTGGTCTT
GAGCTTAGTGCAGCTTTAAAAATAAATAATATTGATGTTAGCATGGTTTA
TCCTGAACCATGGTGCATGCCTCGTCTTTTCACTGCGGATATTGCTGCTT
TCTATGAGGGTTATTATGCCAATAAAGGAAATCAAATTATTAAGGGAACA
GTTGCTGTTGGATT
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