FC930683

Overview
NameFC930683
Unique NameFC930683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.833e-41
Identity = 85/172 (49.42%), Postives = 117/172 (68.02%), Query Frame = 1
Query:  184 TKPKKFFDGLLKHFNLGSRREGDNEEDL----EKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            TK +K   G +   N+  R++ +  E L    + I       F F+A+V+AT NF P NKLG+GGFG VYKG    G ++AVK+LS +S QG++EFENE  ++A++QHRN+V LLGYC  G EK+L+YE+V N+SLD  LF +    +L+W +RY II GIARG+LYLH+DS
Sbjct:  455 TKRRKKMIGAIPLLNV-KRKDTEVTEPLAENGDSITTAGSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDS 625          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.887e-40
Identity = 80/143 (55.94%), Postives = 103/143 (72.03%), Query Frame = 1
Query:  259 EDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            ED   I       F F+A+ +AT  F P NKLG+GGFG VYKG L  G ++AVK+LS +S QG+KEFENE  ++A++QHRN+V LLGYC  G EK+L+YE+V N+SLD  LF S    +L+W +RY II GIARG+LYLH+DS
Sbjct:  301 EDGNDITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDS 443          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.520e-39
Identity = 84/153 (54.90%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  229 LGSRREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            L S+RE   E   E++   E      E +V AT+NF   NKLG+GGFG VYKG+L DG+EIAVK+LS +S QG  EF NE  L+AR+QH N+V +LG C  G EK+LIYEY+ N SLD  LF   R  +LNW +R+DI  G+ARGLLYLH+DS
Sbjct:  496 LSSKREFSGEYKFEEL---ELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDS 645          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39
Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 1
Query:  262 DLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            D + I       F F+A+V+AT  F P NKLG+GGFG VYKG    G ++AVK+LS +S QG+KEFENE  ++A++QHRN+V LLGYC  G EK+L+YE+V N+SLD  LF      +L+W +RY II GIARG+LYLH+DS
Sbjct:  320 DGDDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDS 461          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 7.331e-39
Identity = 80/160 (50.00%), Postives = 109/160 (68.12%), Query Frame = 1
Query:  211 LLKHFNLGSRREGDNEEDLEK-IAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            L+  + L  RR+   E   E  I       F F+A+ +AT NF  SNKLG GGFG V+KG   +G E+AVK+LS  S QG++EF+NE  L+A++QHRN+V LLG+   G EK+L+YEY+ N+SLD  LF  RR  +L+W+ RY+II G+ RG+LYLH+DS
Sbjct:  293 LVLGYALSRRRKAYQEFATENDITTSGSLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDS 452          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39
Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 1
Query:  259 EDLEK--IAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            EDL++  I + E   F F A+ +AT  F  SNKLG GGFG VYKG+L  G  +A+K+LS  S QG +EF+NE  ++A++QHRN+  LLGYC  G EK+L+YE+V N+SLD  LF + +   L+W++RY II GIARG+LYLH DS
Sbjct:  320 EDLDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDS 464          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38
Identity = 79/149 (53.02%), Postives = 106/149 (71.14%), Query Frame = 1
Query:  241 REGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            R  +N+ + E I+    K F F  L  AT +F   NKLGEGGFG VYKG L DG++IAVK+LS ++ QG+ EF+NE  L+A++QHRN+V LLGY   G E+LL+YE++ + SLDK +F   + +EL W+ RY II G+ARGLLYLH+DS
Sbjct:  314 RNSENKHENENISTDSMK-FDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDS 461          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.638e-38
Identity = 73/140 (52.14%), Postives = 102/140 (72.86%), Query Frame = 1
Query:  268 EKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            ++I       F F+ + +AT  F  SN +G GGFG VY+GKL  G E+AVK+LS +S QG +EF+NEA L++++QH+N+V LLG+C  G EK+L+YE+V N+SLD  LF   +  EL+W +RY+II GIARG+LYLH+DS
Sbjct:  323 DEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDS 462          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.638e-38
Identity = 77/150 (51.33%), Postives = 106/150 (70.67%), Query Frame = 1
Query:  238 RREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            R + ++E D   I+  +   + F+ + +AT  F  SNKLGEGGFG VYKGKL +G ++AVK+LS  S QG +EF NEA L+ ++QHRN+V LLG+C    E++LIYE+V N+SLD  LF   +  +L+W +RY II GIARG+LYLH+DS
Sbjct:  321 RTKTESESD---ISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDS 467          
BLAST of FC930683 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.206e-38
Identity = 78/152 (51.32%), Postives = 108/152 (71.05%), Query Frame = 1
Query:  238 RREGDNEEDLEK--IAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVYKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFKSRRNHELNWKQRYDIITGIARGLLYLHEDS 687
            RR+   E DL++  I     +   F+ +  AT+NF  +NKLG+GGFG VYKG L +G E+AVK+LS +S QG +EF+NE  L+A++QHRN+V LLGYC    EK+L+YE+V N+SLD  LF   +  +L+W +RY+II GI RG+LYLH+DS
Sbjct:  333 RRKSYQEIDLDQSGITTLHFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDS 484          
The following BLAST results are available for this feature:
BLAST of FC930683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
CRK23_ARATH7.833e-4149.42Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH3.887e-4055.94Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
SRK6_BRAOE2.520e-3954.90Putative serine/threonine-protein kinase receptor ... [more]
CRK20_ARATH3.291e-3954.93Putative cysteine-rich receptor-like protein kinas... [more]
CRK16_ARATH7.331e-3950.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK25_ARATH9.575e-3953.10Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK26_ARATH1.633e-3853.02Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK35_ARATH3.638e-3852.14Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH3.638e-3851.33Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK12_ARATH6.206e-3851.32Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC34010B09EF PostHarvC1 Citrus clementina cDNA clone C34010B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930683 ID=FC930683; Name=FC930683; organism=Citrus clementina; type=EST; length=699bp
GACATAACAAGGAAACAGAAGAAAAAGAAACCTCAACTTCATCAAATAGT
CTACAAAATCCAAATATCAACATCCTCCTTCTCCCGTCACCACCATCTCC
TAAACGCTCACAAATTTTCTCAATCTTTTTTCACAGACTTAATTGTTTGA
TTGGCAACTTTCCATGAGCAGAGGAAGGACATGACCAAACCCAAGAAATT
CTTTGATGGTCTTTTGAAACACTTCAATCTTGGTTCTAGAAGAGAGGGTG
ACAACGAAGAAGATTTGGAGAAGATTGCTGCTCGGGAACAGAAGCACTTT
CCATTTGAAGCTTTAGTTTCTGCTACCAAAAATTTTCACCCTTCTAATAA
GCTTGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGGAAGTTGGATGATG
GAAGAGAAATTGCAGTGAAGAAGCTGTCTCATAGTTCGAATCAAGGGAAG
AAGGAATTTGAGAATGAGGCTAAGTTGTTGGCTCGTGTGCAGCACCGGAA
TGTTGTGAATCTGTTGGGGTATTGTGCTCATGGAGCGGAGAAGCTATTGA
TTTATGAGTATGTCATAAACGAGAGTCTGGACAAGGTTCTCTTCAAATCG
AGAAGAAATCATGAGCTTAATTGGAAGCAAAGGTATGACATTATCACTGG
CATTGCTCGGGGATTGCTTTACCTTCATGAGGATTCACACACTGCATCA
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