FC930692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2539_RAT (Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20 Identity = 73/230 (31.74%), Postives = 105/230 (45.65%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYF-GPRTMFADLRCSPSCTRAGVHGTVSMCP---------PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQGYRILWTGMGTQLARDVPFSAICW 710 + + PLDV K RLQ+Q VA + ++Y P T+ + +C C GV + +CP D ++ GTLD F KI+R EG LW G A L + VP IY YD + +L + ++ Y P+VAG+LAR P+EL RT++QA + ++ L + + G+R LW G G RDVPFSA+ W Sbjct: 27 LFMTPLDVVKVRLQSQRPTVASELTTPSRFWSLSYTKSPSTLQSPGKCLLYCN--GVLEPLYLCPNGTRCATWFQDPTRFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFL----CGQSLTSDLYAPMVAGALARMGTVTVVSPLELVRTKLQAQHVS---------YRELAACVQAAVAQG-------GWRSLWLGWGPTALRDVPFSALYW 234
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2539_HUMAN (Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 74/230 (32.17%), Postives = 104/230 (45.22%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYFG-PRTMFADLRCSPSCTRAGVHGTVSMCP---------PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQGYRILWTGMGTQLARDVPFSAICW 710 + + PLDV K RLQ+Q +A S+ + ++Y P ++ + +C C GV + +CP D ++ GT+D F KI+R EG LW G A L + VP IY YD + +L A ++ Y P+VAG+LAR P+EL RT++QA V LG G+R LW G G RDVPFSA+ W Sbjct: 27 LFMTPLDVVKVRLQSQRPSMASELMPSSRLWSLSYTKLPSSLQSTGKCLLYCN--GVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFL----CGRALTSDLYAPMVAGALARLGTVTVISPLELMRTKLQA----------QHVSYRELGACVRTAVAQG------GWRSLWLGWGPTALRDVPFSALYW 234
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2539_BOVIN (Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19 Identity = 76/230 (33.04%), Postives = 108/230 (46.96%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYS-HPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVHGTVSMCP---------PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQGYRILWTGMGTQLARDVPFSAICW 710 + + PLDV K RLQ+Q VA P S L S P ++ + +C C GV + +CP D ++ GT+D F KI+R EG LW G A L + VP Y YD + +L A ++ Y P+VAG+LAR P+EL RT++QA + + G + V++ + +G G+R LW G G RDVPFSA+ W Sbjct: 27 LFMTPLDVVKVRLQSQRPSVASELMPPSRLWSLSYAKLPSSLRSTGKCLLYCN--GVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAAYFTAYDQLKAFL----CGRALTSDLYAPMVAGALARLGTVTVISPLELVRTKLQA---QHLSYRELG---------TCVRAA--VAQG--GWRSLWLGWGPTALRDVPFSALYW 234
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2539_MOUSE (Solute carrier family 25 member 39 OS=Mus musculus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 70/232 (30.17%), Postives = 103/232 (44.40%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYF-GPRTMFADLRCSPSCTRAGVHGTVSMCP---------PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQ--GYRILWTGMGTQLARDVPFSAICW 710 + + PLDV K RLQ+Q + ++Y + + +C C GV + +CP D ++ GTLD F KI+R EG LW G A L + VP IY YD + +L + ++ Y P+VAG+LAR P+EL RT++QA +S+ + +++Q G+R LW G G RDVPFSA+ W Sbjct: 27 LFMTPLDVVKVRLQSQRPSATSELTTPSRFWSLSYTKSSSALQSPGKCLLYCN--GVLEPLYLCPNGTRCATWFQDPTRFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFL----CGQSLTSDLYAPMVAGALARMGTVTVVSPLELVRTKLQAQH------------------VSYRELASSVQAAVTQGGWRSLWLGWGPTALRDVPFSALYW 234
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2540_HUMAN (Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.132e-18 Identity = 76/222 (34.23%), Postives = 96/222 (43.24%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVHGTVSMCPPDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQK--GFQGYRILWTGMGTQLARDVPFSAICW 710 +IV PLDV K RLQAQ +N + + F D C C G + P FQ GTLD F+KIIR EG LW G L +AVP IY CYD L +N +P+VAG +AR A P+EL RT+MQ+ K S+V+ + K G+ LW G + RDVPFSA+ W Sbjct: 31 VIVTPLDVVKIRLQAQ----------NNPLPKGKCFVYSNGLMDHLC--VCEEGG--NKLWYKKPGNFQ--GTLDAFFKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLSALLRSKLGENETC----IPIVAGIVARFGAVTVISPLELIRTKMQSKK------------------FSYVELHRFVSKKVSEDGWISLWRGWAPTVLRDVPFSAMYW 214
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2539_DANRE (Solute carrier family 25 member 39 OS=Danio rerio GN=SLC25A39 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18 Identity = 74/228 (32.46%), Postives = 99/228 (43.42%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQA-----AGVAYSHPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVHGTVSMCP---PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQGYRILWTGMGTQLARDVPFSAICW 710 + V PLDV K RLQAQ A A S P + P L C+ V +S C + GTLD F KI EG LW G L +AVP IY CYD R++L + + ++PL+AG LAR A + P+EL RT+MQ+ + + ++ + S V G+ LW G G + RDVPFSA+ W Sbjct: 31 LFVTPLDVVKIRLQAQQTPLFQAIAAESRPWFRVTR------PSKWKCFLYCNGLMDHVYVCQNMSSCSNLYKTSTHFSGTLDAFVKITHNEGLRSLWSGLPPTLVMAVPATVIYFTCYDQLRDFLCYSMGYHG----DHIPLIAGGLARLGAVSVISPLELVRTKMQSRRLQYS--------ELMVCIRSSVAQ--------DGWLSLWRGWGPTVLRDVPFSALYW 232
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2540_XENTR (Solute carrier family 25 member 40 OS=Xenopus tropicalis GN=slc25a40 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 74/220 (33.64%), Postives = 95/220 (43.18%), Query Frame = 3 Query: 57 VNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVHGTVSMCPPDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGF--QGYRILWTGMGTQLARDVPFSAICW 710 V PLDV K RLQAQ S+ G ++ + C +G P F RGT D F +IIR EG LW G L +AVP IY CYD R+ L + + A A+ LVAG+ AR + P+EL RT+MQ +P LS+ + IQ G+ LW G G + RDVPFSA+ W Sbjct: 34 VTPLDVVKIRLQAQ--------------SKPFIKGKCFVYCNGLMDHLCLCTNGNGKAWYRAPGHF--RGTTDAFVQIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLRDILIRSMPERAEIAS----LVAGATARLWSATLISPLELIRTKMQ--------YRP----------LSYKELRQCIQSSVAKDGWLALWKGWGPTVLRDVPFSALYW 215
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2540_DICDI (Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17 Identity = 72/237 (30.38%), Postives = 96/237 (40.51%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVHGTVSMCPPDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQ------AFKGN----------QIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQGYRILWTGMGTQLARDVPFSAICWS 713 +IV PLDV KTRLQ Q G ++ + +F +GTLD F KI + EG WRG L + +P+ IY Y+ + +L + D A + VPLVAG+LAR + + P EL RT Q A+K IG P Q + NN+ G + LW G+G L RDVPFSAI W+ Sbjct: 47 LIVTPLDVVKTRLQTQNTG--------------SHINQKHVF----------------------------KGTLDAFKKIYKNEGPLTFWRGVTPSLLMTIPSATIYFTSYEYLKEYLYQFNDTEAYNIYT-VPLVAGTLARIFSASVTSPFELLRTNSQGIVLQNAYKNTVAMAASSSTATIGTIPLSSEQRFNSFKLYRDIVNNV-----GIKGLWRGLGPTLVRDVPFSAIYWA 235
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2540_DANRE (Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17 Identity = 74/226 (32.74%), Postives = 96/226 (42.48%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVH------GTVSMCPPDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQGYRILWTGMGTQLARDVPFSAICW 710 ++V PLDV K RLQAQ + F +C C H G + + GTLD F KIIR EG LW G L +AVP IY CYD L+ + A PL AG++AR + P+EL RT+MQ+ K Q ++ V + S +K+ +G R LW G G L RDVPFSA+ W Sbjct: 32 LLVTPLDVVKIRLQAQ----------------------KNPFPKGKCFVYCNGLMDHICVCENGNTKVWYKAPGHFSGTLDAFLKIIRMEGIRSLWSGLPPTLIMAVPATVIYFTCYDQLFALLKLKMGDRSDLA----PLFAGAIARVGSATVISPLELIRTKMQSEK--QSYREMSAV------IRSALKN--------EGLRSLWRGWGPTLLRDVPFSAMYW 215
BLAST of FC930692 vs. ExPASy Swiss-Prot
Match: S2540_BOVIN (Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16 Identity = 74/220 (33.64%), Postives = 94/220 (42.73%), Query Frame = 3 Query: 51 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVHGTVSMCPPDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSLARSLACATCYPIELARTRMQAFKGNQIGKKPPGVWQTLLGVLSHVKSTNNIQKGFQGYRILWTGMGTQLARDVPFSAICW 710 ++V P DV K RLQAQ +N + F D C C G P FQ GTLD F KIIR EG LW G L +AVP IY CYD L +N +P+VAG +AR A P+EL RT+MQ+ K + ++ L +S S + G+ LW G + RDVPFSA+ W Sbjct: 31 LMVTPFDVVKIRLQAQ----------NNPFPKGKCFLYSNGLMDHLCV--CEEEGNKAWYKK--PGHFQ--GTLDAFLKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLTALLRSKLGENESR----IPIVAGIVARLGAVTVISPLELIRTKMQSKKFS---------YEELHRFVSKKVSED-------GWISLWRGWAPTILRDVPFSAMYW 214 The following BLAST results are available for this feature:
BLAST of FC930692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930692 ID=FC930692; Name=FC930692; organism=Citrus clementina; type=EST; length=717bpback to top |