FC930696

Overview
NameFC930696
Unique NameFC930696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14478 contig Ccv1_Contig14478:1..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.162e-76
Identity = 140/222 (63.06%), Postives = 169/222 (76.13%), Query Frame = 3
Query:   84 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRP*LAAWIEELNS-SMLTVNKADP 740
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRP WYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+N     T  K DP
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDP 230          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.162e-76
Identity = 140/222 (63.06%), Postives = 169/222 (76.13%), Query Frame = 3
Query:   84 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRP*LAAWIEELNS-SMLTVNKADP 740
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRP WYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+N     T  K DP
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDP 230          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.960e-69
Identity = 131/221 (59.28%), Postives = 163/221 (73.76%), Query Frame = 3
Query:   87 TTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRP*LAAWIEELNS-SMLTVNKADP 740
            ++ +E LP  L S +E P LFDGT RLYI Y CPFAQRAWI RN+KGLQDKI+LV ++L+D+P WYKEKVY    VP+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+FADEL ++ + FT  +Y+    K D + +   A D +E AL KF DGPFFLGQFS VDIAY+  +ER QI+ S   KY+IT GRP L  +IEE+N     T  K DP
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNLEKFIEEINRIEAYTQTKNDP 229          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.238e-64
Identity = 117/210 (55.71%), Postives = 154/210 (73.33%), Query Frame = 3
Query:   84 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRP*LAAWIEELN 707
            +++ +E+LPP L S ++ PP+FDGT RLYI Y CPFAQRAW+TRN KGLQDK++LV ++L+D+P WYK+KVY    VP+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D  KR+FADELF+  + FT  +Y+      A   +   A D LE  L KFDDGPFFLGQFS  D+AY+  +ER QI+ S    YDI  GRP L  +I+E+N
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMN 217          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 59/207 (28.50%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  141 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTND-VYTSFKGDPA---KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRP*LAAWIEELNSSMLTVNKAD 737
            P+ +G+ R+Y    CPFA+R  +    KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   ELFS + +     + +  K D A   ++    F  LE+ L       F     S +D    P+ ER +     E        +  +AA  E+   S L  ++ D
Sbjct:   18 PVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEV--ININLKNKPEWFFKK-NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKD 221          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  141 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEH-NGKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG------PFFLG-QFSQVDIAYIPFVERFQ 629
            P+ +G  R+Y    CPFAQR  +    KG++ +I  + +NL+++P W+ EK  P   VP LE+  G +I ES+   +Y+D  +    L PDDP ++   K   ELFS + +    + TSF     K+  P   + L+K   K ++        FF G   S +D    P+ +R +
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI--ININLKNKPEWFFEK-NPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPS----LVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLE 185          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11
Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 3
Query:  141 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHID----TFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQ 629
            P+ +G  R+Y    CPFAQR  +  N KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   EL S +      F      +      ++    F  LE+ L K     F     S +D    P+ ER +
Sbjct:   18 PVPEGLIRVYSMRFCPFAQRTLLVLNAKGIRHQV--ININLKNKPEWFFQK-NPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRKEFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLE 185          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 3
Query:  141 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG----PFFLG--QFSQVDIAYIPFVERFQIFLSEEFKYDITAGRP*LAAWI 695
            P+ +G  R+Y    CPFAQR  +    KG++ ++  + +NL+++P W+ EK  P+  VP LE++ G ++ ES+   +Y+D  +    L PDDP K+   K   E FS +      +  SF     K+  P   + LE    K ++G      FLG    S VD    P+ +R +     E K +  A  P L  W+
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV--ININLKNKPEWFFEK-NPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVP----PLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPWFQRLEAL---ELK-ECLAHTPKLKLWM 202          
BLAST of FC930696 vs. ExPASy Swiss-Prot
Match: GSTO1_CAEEL (Glutathione transferase omega-1 OS=Caenorhabditis elegans GN=gsto-1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 3
Query:  138 PPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDP----EKRKFADEL 443
            PPL  G+ R+Y    CP+A+RA +    KG++ ++  V LN+ D+  WY  K Y   K PA+EHNGKV+ ES  + +Y+D  F    +LP DP    +++  AD L
Sbjct:   18 PPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEV--VNLNVTDKLEWYWTKHYQ-GKAPAVEHNGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRL 120          
The following BLAST results are available for this feature:
BLAST of FC930696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
IN21B_ORYSJ2.162e-7663.06Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI2.162e-7663.06Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ1.960e-6959.28Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE3.238e-6455.71Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
GSTO1_HUMAN3.756e-1228.50Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT6.407e-1231.43Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_PIG1.093e-1130.41Glutathione S-transferase omega-1 OS=Sus scrofa GN... [more]
GSTO1_MOUSE1.864e-1130.61Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
GSTO1_CAEEL1.864e-1139.62Glutathione transferase omega-1 OS=Caenorhabditis ... [more]
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Properties
Property NameValue
Genbank descriptionC34010C10EF PostHarvC1 Citrus clementina cDNA clone C34010C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930696 ID=FC930696; Name=FC930696; organism=Citrus clementina; type=EST; length=740bp
GACATTTCGGTATCAGGTAACTTTCTTCTTCAAAGCAAAAGAAAAGCTTT
CAGGAAACCTCTAGAGTCTTACCTTCCTCAATGGCAACCACAGCGCAAGA
GAATCTCCCTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCG
ATGGAACTCCCAGGTTGTACATTTCTTACTCGTGCCCATTTGCTCAGCGT
GCGTGGATCACCAGGAACTACAAGGGATTACAAGACAAGATTAAGTTAGT
TCCACTGAACCTCCGAGATAGGCCCACTTGGTACAAGGAGAAGGTTTATC
CTGTTAACAAGGTTCCAGCACTGGAGCACAATGGCAAAGTTATTGGAGAA
TCTCTTGATTTGATTAAATATGTTGACAGCAATTTTGAAGGGCCTTCACT
TTTACCTGATGATCCTGAGAAACGAAAGTTTGCTGATGAACTGTTTTCCC
ACATCGATACCTTCACCAACGATGTGTACACTTCATTCAAAGGAGACCCA
GCAAAACAAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATAA
ATTTGATGATGGCCCGTTCTTCCTTGGACAGTTCAGTCAGGTGGACATAG
CCTATATTCCATTTGTTGAGAGATTCCAGATCTTCTTATCAGAAGAATTT
AAGTATGACATCACTGCAGGCAGGCCTTAACTGGCAGCATGGATTGAGGA
GTTGAACAGCTCGATGCTTACAGTCAACAAAGCAGATCCA
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