FC930712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_DANRE (Dihydropyrimidine dehydrogenase [NADP+] OS=Danio rerio GN=dpyd PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32 Identity = 74/166 (44.58%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 201 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 D+S+ + G++ PNPF + S PP T+ +++RAF++GWG + KT LD V NV+PR R G+ G I G + NIELIS++ K +LKA +P I+IASIM YN+A W EL +E+ DA+E+N SCPHGM ER MG A GQD L+ Sbjct: 532 DISVEMCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFALTKTFGLDKDLVTNVSPRIVR------GTTSGHIFGPGQGSFLNIELISEKTAAYWCKSVAELKADFPKNIIIASIMCSYNQADWTELAKMAQESQADALELNLSCPHGMGERGMGLACGQDPELV 691
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_MOUSE (Dihydropyrimidine dehydrogenase [NADP+] OS=Mus musculus GN=Dpyd PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32 Identity = 76/166 (45.78%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 201 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ +LKA +PD ILIASIM YNK+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIR------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSYNKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELV 691
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_CAEEL (Dihydropyrimidine dehydrogenase [NADP+] OS=Caenorhabditis elegans GN=dpyd-1 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32 Identity = 74/170 (43.53%), Postives = 105/170 (61.76%), Query Frame = 3 Query: 195 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 689 E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR R GS G + G + NIELIS++ E L+ ++LK +P +I+IASIM YNKA W EL + EE G D +E+N SCPHGM E+ MG A GQ +++E Sbjct: 544 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPRIVR------GSTSGPLYGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVIASIMCVYNKADWIELATKSEEAGADILELNLSCPHGMGEKGMGLACGQSPEIVKE 707
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_RAT (Dihydropyrimidine dehydrogenase [NADP+] OS=Rattus norvegicus GN=Dpyd PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.194e-32 Identity = 76/166 (45.78%), Postives = 99/166 (59.64%), Query Frame = 3 Query: 201 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ +LKA +PD ILIASIM YNK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIR------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELV 691
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_PONAB (Dihydropyrimidine dehydrogenase [NADP+] OS=Pongo abelii GN=DPYD PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.860e-32 Identity = 79/185 (42.70%), Postives = 108/185 (58.38%), Query Frame = 3 Query: 180 ASASAEP------------DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 AS SA+P D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ + +LKA +PD I+IASIM YNK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ Sbjct: 513 ASVSAKPELPLFYTAIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELV 691
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_HUMAN (Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31 Identity = 79/185 (42.70%), Postives = 108/185 (58.38%), Query Frame = 3 Query: 180 ASASAEP------------DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 AS SA+P D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ + +LKA +PD I+IASIM YNK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ Sbjct: 513 ASVSAKPELPLFYTPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELV 691
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_DICDI (Dihydropyrimidine dehydrogenase [NADP+] OS=Dictyostelium discoideum GN=pyd1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 3 Query: 201 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 D+S+ + G++ PNPF + S P T+ +++R+F++GWG V KT SLD V NV+PR R + GQ + NIELIS++ K +LK +PDRI+IASIM +NK W +L E +G D IE+N SCPHGM E+ MG A GQD L+ Sbjct: 530 DISVEMCGMKFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLVTNVSPRIVRGTTSGHHFGPGQG-AFLNIELISEKTCHYWCKAIGELKRDFPDRIVIASIMCGFNKEDWTQLAKMAEASGADGIELNLSCPHGMGEKGMGLACGQDTELV 689
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_PIG (Dihydropyrimidine dehydrogenase [NADP+] OS=Sus scrofa GN=DPYD PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31 Identity = 79/185 (42.70%), Postives = 107/185 (57.84%), Query Frame = 3 Query: 180 ASASAEP------------DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 AS SA+P D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ + +LKA +PD I+IASIM YNK W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ Sbjct: 513 ASVSAKPELPLFYTPVDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELV 691
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_CAEBR (Probable dihydropyrimidine dehydrogenase [NADP+] OS=Caenorhabditis briggsae GN=dpyd-1 PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31 Identity = 71/170 (41.76%), Postives = 103/170 (60.59%), Query Frame = 3 Query: 195 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 689 E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR R GS G + G + NIELIS++ E L+ ++LK +P +I++ASIM YNK W EL + E G D +E+N SCPHGM E+ MG A GQ +++E Sbjct: 554 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPRIVR------GSTSGPLYGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVVASIMCVYNKEDWIELATKSEAAGADILELNLSCPHGMGEKGMGLACGQSPEIVKE 717
BLAST of FC930712 vs. ExPASy Swiss-Prot
Match: DPYD_BOVIN (Dihydropyrimidine dehydrogenase [NADP+] OS=Bos taurus GN=DPYD PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 76/185 (41.08%), Postives = 105/185 (56.76%), Query Frame = 3 Query: 180 ASASAEP------------DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 683 AS SA+P D+S+ + L+ NPF + S P T+ ++++RAF+ GW + KT SLD V NV+PR R G+ G + G + NIELIS++ + +LKA +PD I+IASIM YN+ W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ Sbjct: 513 ASVSAKPELPLFYTPIDLVDISVEMAALKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRIIR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELV 691 The following BLAST results are available for this feature:
BLAST of FC930712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930712 ID=FC930712; Name=FC930712; organism=Citrus clementina; type=EST; length=715bpback to top |