FC930721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M_DICDI (AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.230e-39 Identity = 71/147 (48.30%), Postives = 113/147 (76.87%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMESTQR 731 A SA+FL+D KG+VL+ R+YRGDV A +F +K++E++ + P++ ++G+SY++++H+N++L+ + +N NAA++L FL+++++VF YF+ELEEES+RDNFVV+YEL+DEMMDFGYPQ TE IL E+ + Y++E R Sbjct: 2 AASAIFLMDSKGKVLISRNYRGDVPMSVASKFISKILEEED--LNLKPIIQEDGISYIYVKHNNLFLLATTERNANAATILLFLYKMIEVFNEYFKELEEESIRDNFVVIYELMDEMMDFGYPQSTEPKILQEYITQEGYKLERGAR 146
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M_CAEEL (AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 70/149 (46.98%), Postives = 107/149 (71.81%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMESTQRPP 737 A SA+F+LD+KG+ ++ R+YRGD+ ++F L+EK+ + S PV+ +++FI+H+N+YL++A R N N +L FL++ V+VF YF+++EEES+RDNFVV+YELLDEMMDFG+PQ TE+ IL E+ + ++ S RPP Sbjct: 2 ATSAMFILDLKGKTIISRNYRGDIDMTAIDKFIHLLMEKEEEG-SAAPVLTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQTTESRILQEYITQEGQKLISAPRPP 149
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M1_RAT (AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.077e-35 Identity = 69/150 (46.00%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMES-TQRPP 737 + SA+++LD+KG+VL+ R+YRGDV + E F L+EK+ + P++ GV +++I+H+N+YL+ S++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDFGYPQ T++ IL E+ + +++E+ RPP Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPP 150
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M1_MOUSE (AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.077e-35 Identity = 69/150 (46.00%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMES-TQRPP 737 + SA+++LD+KG+VL+ R+YRGDV + E F L+EK+ + P++ GV +++I+H+N+YL+ S++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDFGYPQ T++ IL E+ + +++E+ RPP Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPP 150
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M1_HUMAN (AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.077e-35 Identity = 69/150 (46.00%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMES-TQRPP 737 + SA+++LD+KG+VL+ R+YRGDV + E F L+EK+ + P++ GV +++I+H+N+YL+ S++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDFGYPQ T++ IL E+ + +++E+ RPP Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPP 150
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M1_BOVIN (AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.077e-35 Identity = 69/150 (46.00%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMES-TQRPP 737 + SA+++LD+KG+VL+ R+YRGDV + E F L+EK+ + P++ GV +++I+H+N+YL+ S++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDFGYPQ T++ IL E+ + +++E+ RPP Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPP 150
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M2_HUMAN (AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4) HSP 1 Score: 139.043 bits (349), Expect = 2.483e-32 Identity = 63/144 (43.75%), Postives = 106/144 (73.61%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMES 722 + SA+F+LD+KG+ L+ R+Y+GDV+ + E F L++++ + + P++ V +L+I+HSN+YL+ + +N NA+ + FL++ ++VF YF+ELEEES+RDNFV+VYELLDE+MDFG+PQ T++ IL E+ + ++E+ Sbjct: 2 SASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEG-ALAPLLSHGQVHFLWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQSNKLET 144
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M1_SCHPO (AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe GN=apm1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32 Identity = 64/147 (43.54%), Postives = 98/147 (66.67%), Query Frame = 3 Query: 297 SALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMESTQRPP 737 SA+F+L++KG+V++ RDYR D+ E+F E + + P + G++Y++I H++VYL+ S+ N +A +L FL ++ DVF YF+EL+EES+RDNFV+VYELLDE+MDFG+PQ TE IL E+ + ++ PP Sbjct: 3 SAIFVLNLKGKVIISRDYRADIPMSVVEKFLPLKSEVEEEQGFSTPCLTHEGINYIYIHHNDVYLLALSKMNSDAMEMLVFLRKMADVFIDYFKELQEESIRDNFVLVYELLDEIMDFGFPQTTETKILQEYITQTSNTVKKHAPPP 149
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M2_BOVIN (AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 7.225e-32 Identity = 62/144 (43.06%), Postives = 106/144 (73.61%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMES 722 + SA+F+LD+KG+ L+ R+Y+GDV+ + + F L++++ + + P++ V +L+I++SN+YL+ + +N NA+ + FL+++V+VF YF+ELEEES+RDNFV+VYELLDE+MDFG+PQ T++ IL E+ ++E+ Sbjct: 2 SASAVFILDVKGKPLISRNYKGDVAMSEIDHFMPLLMQREEEG-ALTPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKIVEVFSEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQGNKLET 144
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP1M2_MOUSE (AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 7.988e-31 Identity = 62/144 (43.06%), Postives = 103/144 (71.53%), Query Frame = 3 Query: 291 AVSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSEFHQTDAYRMES 722 + SA+F+LD+KG+ L+ R+Y+GDV + + F L++++ + P++ V +L+I+HSN+YL+ + +N NA+ + FL++ V+VF YF+ELEEES+RDNFV+VY+LLDE+MDFG+PQ T++ IL E+ ++E+ Sbjct: 2 SASAVFILDVKGKPLISRNYKGDVPMTEIDHFMPLLMQREEEGVLA-PLLSHGRVHFLWIKHSNLYLVATTLKNANASLVYSFLYKTVEVFCEYFKELEEESIRDNFVIVYDLLDELMDFGFPQTTDSKILQEYITQQGNKLET 144 The following BLAST results are available for this feature:
BLAST of FC930721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930721 ID=FC930721; Name=FC930721; organism=Citrus clementina; type=EST; length=739bpback to top |