FC930724

Overview
NameFC930724
Unique NameFC930724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930724_ssr73 microsatellite FC930724_ssr73:73..88. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15208 contig Ccv1_Contig15208:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.008e-75
Identity = 136/157 (86.62%), Postives = 148/157 (94.27%), Query Frame = 2
Query:  242 MANIDIEGLLRDVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDP 712
            MANIDI G+++D+PND R+PKTKIVCTLGP+SR+VPMLEKLLRAGMNVARFNFSHGTHEY QETL+NL+ AM NTQILCAVMLDTKGPEIRTGFL DGKPIQLKEGQEITVSTDY  KGNEEMI+MSYKKL +D+KPGNTILCADGTITLTVLSCDP
Sbjct:    1 MANIDIAGIMKDLPNDGRIPKTKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCADGTITLTVLSCDP 157          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 7.985e-73
Identity = 133/159 (83.65%), Postives = 146/159 (91.82%), Query Frame = 2
Query:  242 MANIDIEGLLRDV-PNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPN 715
            MANIDIEG+L+   P D R+PKTKIVCTLGPASRSV M EKLLRAGMNVARFNFSHGTH+Y QETLNNL+ AMHNT ILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQE+T++TDYD KG+ EMI+MSYKKLPV +KPGNTILC+DGTITLTVLSCDP+
Sbjct:    1 MANIDIEGILKQQQPYDGRVPKTKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTILCSDGTITLTVLSCDPD 159          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.545e-60
Identity = 111/137 (81.02%), Postives = 122/137 (89.05%), Query Frame = 2
Query:  299 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            PKTKIVCTLGPASRSVPM+EKLLRAGMNVARFNFSHG+H+Y QET++NLR AM +T ILCAVMLDTKGPEIRTGFLKD KP+QLK+GQEIT+STDY  KG+E MI MSYKKL  DVKP + ILCADG IT TVLSCD
Sbjct:   18 PKTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVILCADGQITFTVLSCD 154          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.256e-59
Identity = 112/137 (81.75%), Postives = 123/137 (89.78%), Query Frame = 2
Query:  299 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            PKTKIVCTLGPASRSVPM+EKLL AGM+VARFNFSHG++EY QETL+NLR AM NT +LCAVMLDTKGPEIRTGFLKDGKPIQLK+GQEIT+STDYD KG+E+ I MSYKKL  DV PG  ILCADGTI+L VLSCD
Sbjct:    7 PKTKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCADGTISLKVLSCD 143          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_EIMTE (Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32
Identity = 69/136 (50.74%), Postives = 91/136 (66.91%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQ-ILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSC 706
            +TKIVCT+GP+   V  + +L+ AGMNV R NFSHG HE     + NL+ A+        A++LDTKGPEIRTG L+  KPI+L  G  + + TDY F GN+  I  SY+KLP  VKPGNTIL ADG++++ V+ C
Sbjct:   57 RTKIVCTMGPSCWDVDKMVQLIDAGMNVCRLNFSHGDHEAHGRVVKNLQEALKQRPGKRVALLLDTKGPEIRTGMLEGDKPIELHAGDMLKIVTDYSFVGNKSCIACSYEKLPSSVKPGNTILIADGSLSVEVVEC 192          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.149e-29
Identity = 65/140 (46.43%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPN 715
            + KTKIVCT+GP + S  ML K+L AGMNV R NFSHG +    + + NLR  M  T    A++LDTKGPEIRT  L+ G  + LK GQ  T +TD    GN EM+ ++Y+    D+  GNT+L  DG I + V + + N
Sbjct:    1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGN 140          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.149e-29
Identity = 65/140 (46.43%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPN 715
            + KTKIVCT+GP + S  ML K+L AGMNV R NFSHG +    + + NLR  M  T    A++LDTKGPEIRT  L+ G  + LK GQ  T +TD    GN EM+ ++Y+    D+  GNT+L  DG I + V + + N
Sbjct:    1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGN 140          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.059e-28
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPN 715
            + KTKIVCT+GP + S  ML K+L AGMNV R NFSHG +    + + NLR  M  T    A++LDTKGPEIRT  L+ G  + LK GQ  T +TD    GN E++ ++Y+    D+  GNT+L  DG I + V + + N
Sbjct:    1 MKKTKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGN 140          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.059e-28
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPN 715
            + KTKIVCT+GP + S  ML K+L AGMNV R NFSHG +    + + NLR  M  T    A++LDTKGPEIRT  L+ G  + LK GQ  T +TD    GN E++ ++Y+    D+  GNT+L  DG I + V + + N
Sbjct:    1 MKKTKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGN 140          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDG-KPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            +TKIVCT+GP + S   L KL+  GMNV R NFSHGTH+Y  + + N+R+AM  T  + A+MLDTKGPEIRTG ++D    + L  GQEI V T+ +  G    I++ YK L   VK G  IL ADG I+L++ + +
Sbjct:   21 RTKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVKVGGYILIADGVISLSITAVE 157          
The following BLAST results are available for this feature:
BLAST of FC930724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYC_SOLTU1.008e-7586.62Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_SOYBN7.985e-7383.65Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_TOBAC4.545e-6081.02Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH2.256e-5981.75Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYK_EIMTE3.070e-3250.74Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=... [more]
KPYK1_ECOLI4.149e-2946.43Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO574.149e-2946.43Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK1_SALTY2.059e-2845.71Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI2.059e-2845.71Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK_DICDI5.991e-2848.18Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]

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Properties
Property NameValue
Genbank descriptionC34010F03EF PostHarvC1 Citrus clementina cDNA clone C34010F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930724 ID=FC930724; Name=FC930724; organism=Citrus clementina; type=EST; length=716bp
GACTAGTAACCAGTCAGGTACGCCCCTCACTCTCGTCTGAGTTTATACAA
TTTAGTGATTTACTAATAAATGAATAAATAAATAAATAAAAGGCAGAAAC
GAATAATTACAAGTAAAAATCAGAATTAGACACTGGCATTTAGCGCCGTG
GAGAAGCAAAGGTGTGCCAGCGAACAGCTGTTCTGTTGGGGTAACTGACT
GATATATTCGTTATTGTGAACTAGACTTGATAAGGTAAGCTATGGCGAAC
ATAGATATAGAGGGACTCTTGAGAGATGTGCCAAATGATAAGCGGTTGCC
GAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTCCCGTTCTGTGCCGA
TGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTGCTCGTTTCAATTTC
TCTCACGGTACGCACGAGTATCAGCAGGAGACTTTGAACAATCTCAGAGC
TGCCATGCACAACACCCAGATCCTCTGTGCTGTCATGCTCGATACCAAGG
GACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAAAACCCATACAACTT
AAAGAAGGTCAGGAAATTACTGTATCTACTGATTATGACTTCAAGGGTAA
TGAAGAAATGATCACCATGAGCTACAAGAAGCTGCCTGTGGATGTGAAGC
CTGGAAATACCATCTTGTGTGCTGATGGCACCATTACCCTGACTGTCTTG
TCTTGTGATCCAAATC
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