FC930749

Overview
NameFC930749
Unique NameFC930749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: HSP7M_PHAVU (Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.686e-49
Identity = 110/225 (48.89%), Postives = 147/225 (65.33%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SP++I AF+L KM+   E YL +S +KAVI+VPA FN+AQR+A K AG IAGLD+Q ++ +P AAAL+YG++ ++GL AV+   GGTF+ SILEISNGV +VKA       GG DFD  L+  L  EF R  + D S   L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L +T+TRS+FE+LV+ LIE T A C++  K
Sbjct:  148 GDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFI----TADASGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLK 368
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: HSP7M_SOLTU (Heat shock 70 kDa protein, mitochondrial OS=Solanum tuberosum GN=HSP68 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.508e-49
Identity = 111/225 (49.33%), Postives = 144/225 (64.00%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SP +I AFIL KM+   E YL +S  KAVI+VPA FN+AQR+AIK AG IAGLD+Q ++ +P AAAL+YG++ ++GL AV+   GGTF+ SILEISNGV +VKA       GG DFD  L+  L  EF R    D S   L LQR   AAE+AK+ LSS  Q ++ L  +       +   K L +T+TRS+FE+LV+ LIE T   C+N  K
Sbjct:  154 GDAWVEANGQQYSPTQIGAFILTKMKETAEAYLGKSINKAVITVPAYFNDAQRQAIKDAGAIAGLDVQRIINEPTAAALSYGMNSKEGLVAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTEGIDLSKDKLALQRLREAAEKAKIELSSTSQTDINLPFI----TADASGAKHLNITLTRSKFETLVNHLIERTRNPCKNCLK 374
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: HSP7M_PEA (Heat shock 70 kDa protein, mitochondrial OS=Pisum sativum GN=HSP1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48
Identity = 109/225 (48.44%), Postives = 148/225 (65.78%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SP++I AF+L K++   E YL ++ +KAV++VPA FN+AQR+A K AG IAGLD+Q ++ +P AAAL+YG++ ++GL AV+   GGTF+ SILEISNGV +VKA       GG DFD  L+  L  EF R  + D +   L LQR   AAE+AK+ LSS  Q E+   NL  I    S   K L +T+TRS+FE+LV+ LIE T A C++  K
Sbjct:  149 GDAWVEANGQQYSPSQIGAFVLTKIKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTESIDLAKDKLALQRLREAAEKAKIELSSTSQTEI---NLPFISADAS-GAKHLNITLTRSKFEALVNNLIERTKAPCKSCLK 369
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SINMW (Chaperone protein dnaK OS=Sinorhizobium medicae (strain WSM419) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.242e-45
Identity = 105/226 (46.46%), Postives = 142/226 (62.83%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SP++I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGLD+  ++ +P AAALAYGLDK++G   AVY   GGTF+ S+LEI +GV +VK+       GG DFD+ LV +L  EF +    D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + ++R++FESLV +LI++T A C+   K
Sbjct:   99 GDAWVEAHDKSYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKEGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTMKLSRAKFESLVDDLIQKTIAPCKAALK 320
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHIME (Chaperone protein dnaK OS=Rhizobium meliloti GN=dnaK PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.242e-45
Identity = 105/226 (46.46%), Postives = 142/226 (62.83%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SP++I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGLD+  ++ +P AAALAYGLDK++G   AVY   GGTF+ S+LEI +GV +VK+       GG DFD+ LV +L  EF +    D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + ++R++FESLV +LI++T A C+   K
Sbjct:   99 GDAWVEAHGTSYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKEGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTMKLSRAKFESLVEDLIQKTIAPCKAALK 320
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHIEC (Chaperone protein dnaK OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.242e-45
Identity = 106/226 (46.90%), Postives = 141/226 (62.39%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SPA+I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK+DG   AVY   GGTF+ SILEI +GV +VK+       GG DFD+ LV +L  EF + +  D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++ ESLV +L++ T A C+   K
Sbjct:   99 GDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVAEFKKDNGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTLKLTRAKLESLVDDLVQRTIAPCKAALK 320
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHIE6 (Chaperone protein dnaK OS=Rhizobium etli (strain CIAT 652) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.242e-45
Identity = 106/226 (46.90%), Postives = 141/226 (62.39%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SPA+I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK+DG   AVY   GGTF+ SILEI +GV +VK+       GG DFD+ LV +L  EF + +  D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++ ESLV +L++ T A C+   K
Sbjct:   99 GDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVAEFKKDNGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTLKLTRAKLESLVDDLVQRTIAPCKAALK 320
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_AGRT5 (Chaperone protein dnaK OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dnaK PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 104/226 (46.02%), Postives = 142/226 (62.83%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWV+ +   +SP++I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGLD+  ++ +P AAALAYGLDK++G   AVY   GGTF+ S+LEI +GV +VK+       GG DFD+ LV +L  EF +    D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++FESLV +L++ T A C+   K
Sbjct:   99 GDAWVKAQDKNYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALAYGLDKKEGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLAGEFKKDQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTLKLTRAKFESLVDDLVQRTVAPCKAALK 320
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHILW (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaK PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 106/226 (46.90%), Postives = 141/226 (62.39%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SPA+I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK++G   AVY   GGTF+ SILEI +GV +VK+       GG DFD+ LV +L  EF R +  D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++ ESLV +L++ T A C+   K
Sbjct:   99 GDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKEGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVGEFKRDNGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTLKLTRAKLESLVDDLVQRTIAPCKAALK 320
[Close]
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHIL3 (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaK PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 106/226 (46.90%), Postives = 141/226 (62.39%), Query Frame = 3 
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SPA+I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK++G   AVY   GGTF+ SILEI +GV +VK+       GG DFD+ LV +L  EF R +  D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++ ESLV +L++ T A C+   K
Sbjct:   99 GDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKEGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVGEFKRDNGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTLKLTRAKLESLVDDLVQRTIAPCKAALK 320
The following BLAST results are available for this feature:
BLAST of FC930749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7M_PHAVU2.686e-4948.89Heat shock 70 kDa protein, mitochondrial OS=Phaseo... [more]
HSP7M_SOLTU3.508e-4949.33Heat shock 70 kDa protein, mitochondrial OS=Solanu... [more]
HSP7M_PEA5.065e-4848.44Heat shock 70 kDa protein, mitochondrial OS=Pisum ... [more]
DNAK_SINMW5.242e-4546.46Chaperone protein dnaK OS=Sinorhizobium medicae (s... [more]
DNAK_RHIME5.242e-4546.46Chaperone protein dnaK OS=Rhizobium meliloti GN=dn... [more]
DNAK_RHIEC5.242e-4546.90Chaperone protein dnaK OS=Rhizobium etli (strain C... [more]
DNAK_RHIE65.242e-4546.90Chaperone protein dnaK OS=Rhizobium etli (strain C... [more]
DNAK_AGRT56.846e-4546.02Chaperone protein dnaK OS=Agrobacterium tumefacien... [more]
DNAK_RHILW1.168e-4446.90Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHIL31.168e-4446.90Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionC34010H04EF PostHarvC1 Citrus clementina cDNA clone C34010H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930749 ID=FC930749; Name=FC930749; organism=Citrus clementina; type=EST; length=703bp
AAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCTCCGGCTAAG
ATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGAAGTTTATTT
GAAAGAGTCTGCTACAAAGGCCGTGATAAGTGTTCCGGCTTGTTTTAATG
AAGCTCAAAGAGAAGCAATAAAGTATGCCGGTGATATTGCTGGTCTCGAC
ATACAGGGCGTTGTTGAGGATCCCGTAGCTGCCGCACTCGCATATGGCCT
TGATAAGAGAGATGGGCTTTTTGCAGTCTACAGTTTTGGAGGTACATTTG
AGTTTTCGATTTTGGAGATCTCAAATGGTGTCATTAAGGTGAAAGCAAAG
AGAAAATCCTTAAGTCATGGAGGGTTGGACTTCGATTTGTTATTGGTGCG
GCATTTATGGAGGGAATTTACGCGTTGTCATGCATTTGATGCTTCACATT
ACCCACTTGTCCTTCAAAGGTTCTTGGGTGCTGCTGAAAGAGCAAAAGTT
AGACTGTCTTCAGAGCCCCAAGTTGAAGTTAAGCTTCACAACCTGCTCAA
TATTCAGGTGAAGAAATCTCTCGTGCAGAAAGATTTGGAGGTCACAATCA
CGAGGTCTGAGTTTGAATCCTTGGTTAGTGAGTTGATCGAGGAGACTGGG
GCTATTTGTCAAAATGTTTGGAAGTGGCAACATCACGAGGAAGGATCTTG
ATG
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