FC930750

Overview
NameFC930750
Unique NameFC930750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15212 contig Ccv1_Contig15212:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPAC-ASTVESRVQQDGKVVTSRGPGTTMEFAVA 691
            K+ LV +A G+E +E VI +D++RR+G  VTVA +  +  V     V I  D  + D +    +D++ LPGG  GA NL ES V++ I+K+Q S   L AA+CA P  AL +  +  G K T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGP-TALLAHEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALA 167          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 72/167 (43.11%), Postives = 100/167 (59.88%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQL---APACASTVESRVQQDGKVVTSRGPGTTMEFAVA 691
            K+ LV +A G+E +E VI  DV+RR+G  VTVA +  +  V     V I  DA + D R +  +D+I LPGG  GA NL ES  ++ I+K Q S   L AA+CA P  AL + G+  G K   +P   +++   A  C S  ESRV++DG ++TSRGPGT+ EF +A
Sbjct:    4 KRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGP-TALLAHGIGFGSKVITHPLAKDKMMNGAHYCYS--ESRVEKDGNILTSRGPGTSFEFGLA 167          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24
Identity = 66/164 (40.24%), Postives = 98/164 (59.76%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDC-RDAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQ-LAPACASTVESRVQQDGKVVTSRGPGTTMEFAV 688
            K+ LV +A G+E +E VI +DV+RR+G  VTVA +  +  V     V I  D+ + D  +   +D++ LPGG+ GA NL ES  ++ ++K Q     L AA+CA P  AL + G+  G   T +P   ++ +A       E+RVQ+DG V+TSRGPGT+ EFA+
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGP-TALLAHGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFAL 166          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPAC-ASTVESRVQQDGKVVTSRGPGTTMEFAVA 691
            K+ LV +A G+E +E VI +DV+RR+G  VTVA +  +  V     V I  D  + D +    +D++ LPGG  GA NL ES +++ I+K+Q S   L AA+CA P  AL +  +  G K T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGP-TALLAHEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALA 167          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 67/165 (40.61%), Postives = 101/165 (61.21%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTV-ESRVQQDGKVVTSRGPGTTMEFAVA 691
            K+ LV +A G+E +E VI +DV+RR+G  VTVA +  +  V     V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AA+CA P  AL +  +  G K T +P   +++      T  E+RV++DG ++TSRGPGT+ EFA+A
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALA 167          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 66/165 (40.00%), Postives = 101/165 (61.21%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTV-ESRVQQDGKVVTSRGPGTTMEFAVA 691
            K+ LV +A G+E +E VI +DV+RR+G  VT+A +  +  V     V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AA+CA P  AL +  +  G K T +P   +++      T  E+RV++DG ++TSRGPGT+ EFA+A
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALA 167          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.210e-23
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPAC-ASTVESRVQQDGKVVTSRGPGTTMEFAV 688
            K+ LV +A G+E +E VI +DV+RR+G  VTVA +  +  V     V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q     L AA+CA P  AL +  +  G K T +P   +++      S  E+RV++DG ++TSRGPGT+ EFA+
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFAL 166          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23
Identity = 65/165 (39.39%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  203 KKVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPAC-ASTVESRVQQDGKVVTSRGPGTTMEFAVA 691
            K+ LV +A G+E +E VI +D++RR+G  VTVA +  +  V     V I  D  + + +    +D++ LPGG  GA NL ES +++ I+K+Q +   L AA+CA P  AL +  +  G K T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGP-TALLAHEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALA 167          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20
Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 2
Query:  212 LVPVANGSEPIEAVITIDVLRRSGADVTVASV--EKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDG--KVVTSRGPGTTMEFAV 688
            LV +A GSE  EAV TID+L R G  VT ASV  +  L +    GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+   +G + AA+CA+PA  L    +      T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F +
Sbjct:    6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGL 166          
BLAST of FC930750 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 2
Query:  206 KVLVPVANGSEPIEAVITIDVLRRSGADVTVASV--EKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGMPGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDG--KVVTSRGPGTTMEFAV 688
            + LV +A GSE  EAV TID+L R G  VT ASV  +  L +    GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+   +G + AA+CA+ A  L    +      T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F +
Sbjct:    4 QALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGL 166          
The following BLAST results are available for this feature:
BLAST of FC930750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PARK7_MESAU1.709e-2441.21Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_CHICK1.709e-2443.11Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_DANRE3.808e-2440.24Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_MOUSE4.973e-2441.21Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
PARK7_HUMAN1.108e-2340.61Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_CERAE1.447e-2340.00Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_BOVIN4.210e-2340.24Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_RAT7.181e-2339.39Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
THIJ_ECOLI5.690e-2038.65Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY6.291e-1937.58Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34010H05EF PostHarvC1 Citrus clementina cDNA clone C34010H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930750 ID=FC930750; Name=FC930750; organism=Citrus clementina; type=EST; length=691bp
ACGAAGCTCCCCACATCATACCGTAACGATGCCTCTAGAAAACTAACTTA
AAAAAATGGTATTAATAAGCGTACGCCACGTCACTCCTCAATCACTTCTT
CGTCACTTTCCTCTCACTCAACAGTTTCTCCCCAAACAAATTCCTTCTTT
GAAAAATCGCATTTTCTCTTTCACAGCAACAGCTACAATGTCTTCAACTT
CCAAAAAGGTTTTGGTGCCTGTTGCGAACGGGAGTGAGCCGATTGAGGCC
GTGATAACGATCGATGTTTTGAGAAGGTCTGGAGCTGACGTCACGGTTGC
GTCTGTGGAGAAACAGCTTCGTGTCGACGCGTGTCATGGTGTCAAGATTG
TCGCTGATGCTCTTGTGTCTGACTGCCGCGACGCTGTTTTTGATCTTATA
GCTCTTCCCGGTGGCATGCCCGGTGCTACCAATCTGAAGGAATCTGATGT
ATTAGAAAGCATTGTGAAGAAGCAGGCCTCAGCTGGGTGTCTTTATGCTG
CTGTCTGTGCTTCACCTGCTGTGGCATTAGGGTCTTGGGGTTTGTTGAAG
GGATTGAAGGCTACTTGTTATCCGTCATTTATGGAGCAATTAGCTCCTGC
TTGTGCATCAACTGTTGAATCAAGAGTACAGCAGGATGGTAAAGTTGTTA
CGAGTCGTGGACCTGGCACTACTATGGAGTTTGCTGTTGCA
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