FC930757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC4L_CHICK (Nucleolar complex protein 4 homolog OS=Gallus gallus GN=NOC4L PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.089e-46 Identity = 84/169 (49.70%), Postives = 123/169 (72.78%), Query Frame = 3 Query: 138 KSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 644 K F + W+TFL+ LP +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++AL+ LFIL+ QH LEYP+FY+KLY+LL PSI+ K+RA+FF L D L S LPAYL AAF+K+LSRL++ PP L+++ I NL RRHP+ L+HR +G + ++D Sbjct: 241 KQAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLALNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSED 409
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC4L_MOUSE (Nucleolar complex protein 4 homolog OS=Mus musculus GN=Noc4l PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.314e-45 Identity = 85/171 (49.71%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 129 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHND 641 K+ K F + W+ FL+ LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ LFIL+ +H LEYP+FY+KLY LL PSIF K+RA+FF L D L S LPAYL AAF K+L+RL++ PP L+++ LI NLLRRHP+ ++HR G E D Sbjct: 246 KEHKKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNGLFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDAD 416
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC4L_RAT (Nucleolar complex protein 4 homolog OS=Rattus norvegicus GN=Noc4l PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.732e-45 Identity = 83/171 (48.54%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 129 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHND 641 K+ + F + W+ FL+ LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ LFIL+ +H LEYP+FY++LY LL PSIF K+RA+FF L D L S LPAYL AAF K+L+RL++ PP L+++ LI NLLRRHP+ ++HR G E D Sbjct: 246 KEQRKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNGLFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDAD 416
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC4B_XENLA (Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-B PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.558e-44 Identity = 83/178 (46.63%), Postives = 123/178 (69.10%), Query Frame = 3 Query: 129 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 662 K+ K F + W++FL+ L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S++AL+ LFIL+ QH LEYP+FY+KLY+LL PS+F K+RA+FF L + L S LP YL AAF K+L+RL++ PP L+I+ I NL+RRHP+ L+HR + D E++ Sbjct: 257 KEQKRVFERVWMSFLKHQLSVSLYKKVLLILHESILPHMSKPSLMIDFLTAAYDVGGAISLLALNGLFILIHQHNLEYPDFYKKLYSLLEPSVFHVKYRARFFHLANLFLSSTHLPVYLVAAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAGDLVTDPYIMEEQ 434
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC41_XENLA (Nucleolar complex protein 4 homolog A OS=Xenopus laevis GN=noc4l-A PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.341e-44 Identity = 87/191 (45.55%), Postives = 126/191 (65.97%), Query Frame = 3 Query: 90 KSNNNALSAATISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 662 K+ NN + K K F + W+ FL+ L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S++AL+ LFIL+ QH LEYP+FY+KLY+LL PSIF K+RA+FF L + L S LP YL AAF K+L+RL++ PP L+I+ I NL+RRHP+ L+HR + D E++ Sbjct: 244 KNVNNEDWKPSKLKDHKRVFERVWMIFLKHQLSVSLYKKVLLILHESILPHMSKPTLMIDFLTAAYDVGGAISLLALNGLFILIHQHNLEYPDFYKKLYSLLEPSIFHVKYRARFFHLANMFLSSTHLPVYLVAAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAGDLATDPYIMEEQ 434
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC4L_HUMAN (Nucleolar complex protein 4 homolog OS=Homo sapiens GN=NOC4L PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.363e-44 Identity = 84/171 (49.12%), Postives = 120/171 (70.18%), Query Frame = 3 Query: 129 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHND 641 K+ + F W++FL+ LP+ +YK+VL+ +H A++P L+ P ++ DFLTR+ D+GG +S++AL+ LFIL+ +H LEYP+FY KLY LL PS+F K+RA+FF L D L S LPAYL AAF K+L+RL++ PP L+++ I NLLRRHP+ L+HR G E D Sbjct: 246 KEHRRVFQAMWLSFLKHKLPLSLYKKVLLIVHDAILPQLAQPTLMIDFLTRACDLGGALSLLALNGLFILIHKHNLEYPDFYRKLYGLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKRLARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPHGPELDAD 416
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC4L_DANRE (Nucleolar complex protein 4 homolog OS=Danio rerio GN=noc4l PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.699e-44 Identity = 87/192 (45.31%), Postives = 130/192 (67.71%), Query Frame = 3 Query: 87 EKSNNNALSAATISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 662 ++S ++ AA + K+ K F + W+ FLR LP +YK++LV LH +++P +S+P ++ DFL+ +YDIGG +S+ AL+ LF+ + +H L+YP+FY+KLY LL PSIF K+RA+FF L + L S LP YL AAFVK+L+RLS+ PP+ L+++ I NL+RRHPS L+HR + DD +E Sbjct: 242 QQSKHDDWKAAKL-KEHKRAFEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMMDFLSAAYDIGGAISLSALNGLFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLANIFLSSTHLPVYLVAAFVKRLARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAADEPCDDPYVMEE 432
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: YG06_SCHPO (Uncharacterized protein C1604.06c OS=Schizosaccharomyces pombe GN=SPBC1604.06c PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.360e-37 Identity = 77/177 (43.50%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 114 AATISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 644 ++T + +K F ++W++ L LPL V++YK+VL +H+ VIPFL P +L DFLT +Y+ VS++AL+ LF LM H L+YP FY KLYALL ++ K R++FF LLD L S LPA L A+F+K+L+RL++ PP +++ I+N L+RHP+ +LHR + D Sbjct: 219 SSTETSSIKRAFQESWLSALSLPLSVNLYKQVLNVIHKRVIPFLQKPNLLMDFLTDAYNSHHAVSLLALNGLFTLMISHNLDYPLFYPKLYALLDRNLLYLKTRSRFFRLLDLFLSSTHLPATLIASFIKRLARLALTAPPGAIAIVIPFIYNCLQRHPTCMQMLHRSSAESGDSFD 395
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: NOC4_YEAST (Nucleolar complex protein 4 OS=Saccharomyces cerevisiae GN=NOC4 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.835e-35 Identity = 75/176 (42.61%), Postives = 108/176 (61.36%), Query Frame = 3 Query: 102 NALSAATISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------GGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLH 611 N A K KS F K W++ L L + YK +L+ LH+ +IP P L DFLT SY++ GVV ++AL+ LF LM + LEYPNFY KLY ++ P + K+RA+FF L+D L S L A+L A+F+KKL+RL++ PPS + ++ I+NL+R+HP+ +LH Sbjct: 242 NPPQAIENESKFKSNFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLQSSNKNAGVVPILALNGLFELMKRFNLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHLSAHLVASFIKKLARLTLESPPSAIVTVIPFIYNLIRKHPNCMIMLH 417
BLAST of FC930757 vs. ExPASy Swiss-Prot
Match: YO93_CAEEL (Uncharacterized protein T20B12.3 OS=Caenorhabditis elegans GN=T20B12.3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21 Identity = 52/169 (30.77%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 135 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHND 641 + + + W+ + + + +++ + + VI L P DF + +D +++L ++F L+++H EYP FY+K+Y+L PS+ + LLDS L S LP Y+ A+F+K+LSR +L P I+ LI NL+ RHP+ + L+HRE ++D Sbjct: 190 ISTDYDNVWMAVMNGKISDKLTLKLIPYITQNVISKLKAPFKSADFFFKMFDKTDYHGILSLGAIFRLISEHNFEYPKFYDKVYSLTNPSLLYMSQKESILTLLDSFLSSTHLPTYITASFLKRLSRCLLLAPIDAQEPILGLIRNLVIRHPNCSELVHREVPQTLYDD 358 The following BLAST results are available for this feature:
BLAST of FC930757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930757 ID=FC930757; Name=FC930757; organism=Citrus clementina; type=EST; length=697bpback to top |