FC930777

Overview
NameFC930777
Unique NameFC930777
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10296 contig Ccv1_Contig10296:5..728. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMP2B_ARATH (Methionine aminopeptidase 2B OS=Arabidopsis thaliana GN=MAP2B PE=2 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.178e-79
Identity = 139/161 (86.34%), Postives = 148/161 (91.93%), Query Frame = 1
Query:  238 LPQQTDPPSIPVVDLFPSGEFPEGEIQQYKDDNLWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            LPQQTDPPSIPVV+LFPSGEFPEGEIQ+YKDDNLWRTTS           P YNSVR+AAEVHRQVRKY++S++KPGMLMTD+CETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDG I+DCAFTVAFNPMFD
Sbjct:   75 LPQQTDPPSIPVVELFPSGEFPEGEIQEYKDDNLWRTTSEEKRELERFEKPIYNSVRRAAEVHRQVRKYVRSIVKPGMLMTDICETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGHIIDCAFTVAFNPMFD 235          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMP2A_ARATH (Methionine aminopeptidase 2A OS=Arabidopsis thaliana GN=MAP2A PE=2 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 4.337e-74
Identity = 134/159 (84.28%), Postives = 142/159 (89.31%), Query Frame = 1
Query:  244 QQTDPPSIPVVDLFPSGEFPEGEIQQYKDDNLWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            QQTDPPSIPV++LFPSG+FP+GEIQQY DDNLWRTTS           P YNS+RQAAEVHRQVRKY++S+LKPGMLM DLCETLENTVRKLISENGLQAGIAFPTGCSLN VAAHWTPNSGDKTVLQYDDVMKLDFGTHIDG IVD AFTVAFNPMFD
Sbjct:   79 QQTDPPSIPVLELFPSGDFPQGEIQQYNDDNLWRTTSEEKREMERLQKPIYNSLRQAAEVHRQVRKYMRSILKPGMLMIDLCETLENTVRKLISENGLQAGIAFPTGCSLNNVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGHIVDSAFTVAFNPMFD 237          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_RAT (Methionine aminopeptidase 2 OS=Rattus norvegicus GN=Metap2 PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51
Identity = 95/163 (58.28%), Postives = 116/163 (71.17%), Query Frame = 1
Query:  247 QTDPPSIPVVDLFPSGEFPEGEIQQYKDDN-----LWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            QTDPPS+P+ DL+P+G FP+G+  +Y          WRTTS             +N  R+AAE HRQVRKY+ S +KPGM M ++CE LE+  RKLI ENGL AG+AFPTGCSLN  AAH+TPN+GD TVLQYDD+ K+DFGTHI G I+DCAFTV FNP +D
Sbjct:  112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYD 274          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_MOUSE (Methionine aminopeptidase 2 OS=Mus musculus GN=Metap2 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51
Identity = 95/163 (58.28%), Postives = 116/163 (71.17%), Query Frame = 1
Query:  247 QTDPPSIPVVDLFPSGEFPEGEIQQYKDDN-----LWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            QTDPPS+P+ DL+P+G FP+G+  +Y          WRTTS             +N  R+AAE HRQVRKY+ S +KPGM M ++CE LE+  RKLI ENGL AG+AFPTGCSLN  AAH+TPN+GD TVLQYDD+ K+DFGTHI G I+DCAFTV FNP +D
Sbjct:  112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYD 274          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_HUMAN (Methionine aminopeptidase 2 OS=Homo sapiens GN=METAP2 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51
Identity = 95/163 (58.28%), Postives = 116/163 (71.17%), Query Frame = 1
Query:  247 QTDPPSIPVVDLFPSGEFPEGEIQQYKDDN-----LWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            QTDPPS+P+ DL+P+G FP+G+  +Y          WRTTS             +N  R+AAE HRQVRKY+ S +KPGM M ++CE LE+  RKLI ENGL AG+AFPTGCSLN  AAH+TPN+GD TVLQYDD+ K+DFGTHI G I+DCAFTV FNP +D
Sbjct:  112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYD 274          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_BOVIN (Methionine aminopeptidase 2 OS=Bos taurus GN=METAP2 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.799e-51
Identity = 94/163 (57.67%), Postives = 116/163 (71.17%), Query Frame = 1
Query:  247 QTDPPSIPVVDLFPSGEFPEGEIQQYKDDN-----LWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            QTDPPS+P+ DL+P+G FP+G+  +Y          WRTTS             +N  R+AAE HRQVRKY+ S +KPGM M ++CE +E+  RKLI ENGL AG+AFPTGCSLN  AAH+TPN+GD TVLQYDD+ K+DFGTHI G I+DCAFTV FNP +D
Sbjct:  111 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKMEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYD 273          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_DICDI (Methionine aminopeptidase 2 OS=Dictyostelium discoideum GN=metap2 PE=3 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 2.167e-49
Identity = 92/158 (58.23%), Postives = 121/158 (76.58%), Query Frame = 1
Query:  247 QTDPPSIPVVDLFPSGEFPEGEIQQYKDDNLWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            QT+PP+IPV   F +G +P GEIQ+Y+D N +RTTS             YN VR+AAEVHRQVRKY++ ++KPG+ +T+L E+LEN  R LI  +GL+AGIAFPTG SLN +AAH+TPN+GDKTVL+ DDV+K+DFGTH++G I+DCAFTV F+  +D
Sbjct:   77 QTNPPTIPVSKQFSNGVYPMGEIQEYRDSNSYRTTSEEKRLEERIHANIYNDVRRAAEVHRQVRKYVQGIVKPGLGLTELVESLENASRTLIEADGLKAGIAFPTGVSLNHIAAHFTPNTGDKTVLKKDDVLKIDFGTHVNGYIIDCAFTVTFDEKYD 234          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_SCHPO (Methionine aminopeptidase 2 OS=Schizosaccharomyces pombe GN=fma2 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.099e-44
Identity = 80/160 (50.00%), Postives = 116/160 (72.50%), Query Frame = 1
Query:  244 QQTDPPSIPVVDLFPSGEFPEGEIQQYKDDNLWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFDH 723
            +QT+PP++ +  +F + ++P GE+  Y +DNLWRTT             +YN +R+AAEVHRQ R+Y +S++KPGM M D+  T+ENT R L+ E+GL++GI FPTG SLN  AAH+TPN+GD T+L+  DVMK+D G H++G IVD AFT++F+P +D+
Sbjct:   64 EQTNPPTVGLSKIFVNKKYPVGEVCDYAEDNLWRTTDEEKRALDRQNFDQYNDLRRAAEVHRQARQYAQSVIKPGMSMMDVVNTIENTTRALVEEDGLKSGIGFPTGVSLNHCAAHYTPNAGDTTILKEKDVMKVDIGVHVNGRIVDSAFTMSFDPQYDN 223          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_YEAST (Methionine aminopeptidase 2 OS=Saccharomyces cerevisiae GN=MAP2 PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 3.714e-33
Identity = 74/158 (46.84%), Postives = 99/158 (62.66%), Query Frame = 1
Query:  280 LFPSGEFPEGEIQQYKDD-NLWRTT--SXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQA-------GIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFDH 723
            LFP G++PEG    Y  D NL RTT                +N VR+ AE+HR+VR+ IK  + PGM + D+ + +ENT RK      L A       GI FPTG SLN  AAH+TPN+GDKTVL+Y+DVMK+D+G  ++G I+D AFTV+F+P +D+
Sbjct:   61 LFPDGKYPEGAWMDYHQDFNLQRTTVEESRYLKRDLERAEHWNDVRKGAEIHRRVRRAIKDRIVPGMKLMDIADMIENTTRKYTGAENLLAMEDPKSQGIGFPTGLSLNHCAAHFTPNAGDKTVLKYEDVMKVDYGVQVNGNIIDSAFTVSFDPQYDN 218          
BLAST of FC930777 vs. ExPASy Swiss-Prot
Match: AMPM2_ENCHE (Methionine aminopeptidase 2 OS=Encephalitozoon hellem GN=MAP2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20
Identity = 55/153 (35.95%), Postives = 89/153 (58.17%), Query Frame = 1
Query:  265 IPVVDLFPSGEFPEGEIQQYKDDNLWRTTSXXXXXXXXXXXPKYNSVRQAAEVHRQVRKYIKSLLKPGMLMTDLCETLENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTV-LQYDDVMKLDFGTHIDGCIVDCAFTVAFNPMFD 720
            +P+  L   G + +G +   K+  +  TT                  R+AAE HR+VR  ++S++KPGM + ++ +++E++ R L+S      GI FP G S+N  AAH++ N G+K + L  +DV+K+DFGTH +G I+D AFT+AF   F+
Sbjct:   12 LPIEFLPRDGAYRKGRLLDSKNAEVENTTESDIL----------QDARRAAEAHRRVRYKVQSIIKPGMTLLEIVKSIEDSTRILLSGER-NNGIGFPAGMSMNSCAAHYSVNPGEKDIILTENDVLKIDFGTHSNGRIMDSAFTIAFKEEFE 153          
The following BLAST results are available for this feature:
BLAST of FC930777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
AMP2B_ARATH1.178e-7986.34Methionine aminopeptidase 2B OS=Arabidopsis thalia... [more]
AMP2A_ARATH4.337e-7484.28Methionine aminopeptidase 2A OS=Arabidopsis thalia... [more]
AMPM2_RAT5.158e-5158.28Methionine aminopeptidase 2 OS=Rattus norvegicus G... [more]
AMPM2_MOUSE5.158e-5158.28Methionine aminopeptidase 2 OS=Mus musculus GN=Met... [more]
AMPM2_HUMAN5.158e-5158.28Methionine aminopeptidase 2 OS=Homo sapiens GN=MET... [more]
AMPM2_BOVIN8.799e-5157.67Methionine aminopeptidase 2 OS=Bos taurus GN=METAP... [more]
AMPM2_DICDI2.167e-4958.23Methionine aminopeptidase 2 OS=Dictyostelium disco... [more]
AMPM2_SCHPO2.099e-4450.00Methionine aminopeptidase 2 OS=Schizosaccharomyces... [more]
AMPM2_YEAST3.714e-3346.84Methionine aminopeptidase 2 OS=Saccharomyces cerev... [more]
AMPM2_ENCHE6.150e-2035.95Methionine aminopeptidase 2 OS=Encephalitozoon hel... [more]

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Properties
Property NameValue
Genbank descriptionC34108H10EF PostHarvP1 Citrus clementina cDNA clone C34108H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930777 ID=FC930777; Name=FC930777; organism=Citrus clementina; type=EST; length=724bp
GGGTTTTTAGTTTTTCGTCTTCGTGTGTAGAGAACATTTGGTTGCAGCTT
CAACAAGATGGCAGATGAAAATGTTAGTAAAGAAATTTCTATCGAAGAGA
ATGGAACTTTGGAGTCGGTAAATGGAAATGAAGAGCACTCTGATGTTTCT
TCGATGCAAAAAGACGAGGAAGAGGAGGGAAAAGAAGTTTCATCAAAGAA
GAAAAAGAAGAAAAACAAAAGCAAGAAAAAGAAGGAACTGCCTCAGCAAA
CTGATCCACCATCTATTCCTGTAGTTGATCTTTTCCCATCTGGGGAGTTT
CCTGAGGGTGAAATTCAGCAGTACAAAGACGATAATTTATGGAGGACTAC
ATCTGAAGAGAAGAGGGAGTTGGAGCGCCTTGAAAAACCAAAATACAATT
CAGTTCGCCAAGCCGCAGAAGTTCATCGACAGGTGCGGAAATACATTAAA
AGCCTATTGAAGCCTGGAATGCTAATGACTGACCTCTGTGAAACATTGGA
GAACACAGTTCGTAAACTAATATCAGAAAATGGCCTGCAAGCAGGAATTG
CATTTCCTACTGGATGCTCCTTGAACTGGGTTGCTGCACATTGGACCCCA
AATAGTGGAGATAAGACTGTACTTCAGTATGATGATGTAATGAAGTTGGA
TTTTGGGACTCATATTGATGGATGTATTGTTGACTGTGCATTCACAGTGG
CATTCAATCCTATGTTTGATCATT
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