FC930795

Overview
NameFC930795
Unique NameFC930795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: PBLD1_MOUSE (Phenazine biosynthesis-like domain-containing protein 1 OS=Mus musculus GN=Pbld1 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.571e-28
Identity = 81/214 (37.85%), Postives = 115/214 (53.74%), Query Frame = 1
Query:   97 VVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAADS--PNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEV-SLIHKALSVSSVMDMKITTTSGDIFV---------VLPSAKSVTDVEPQLDEIRKCPGKSIIVSG 702
            + DAFT +AF+GNPAAVCLLE   +E+  Q +A E N+S+T ++ +L   DS   + RF LRWFTPV+EV LCGHATLA+A  LF +    ++ + F T+SG L A++  D                   I LDFP  PT   +F EV  LI  A+  + V D++ +T +  + V          L S K  T+  P +++  K  G  + V G
Sbjct:    7 IADAFTATAFRGNPAAVCLLERTLEEDAHQQIAREMNLSETAFIRKLQPTDSFTQSSRFGLRWFTPVSEVPLCGHATLASAAVLFHKIQNRNSTLTFVTMSGELKARRAED------------------GIVLDFPVYPTFPQDFHEVEDLIKAAIGDTLVQDIRYSTDTRKLLVRLSDSYDRSFLESLKVNTEPLPAIEKTGKVRGLILTVKG 202          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: PBLD2_MOUSE (Phenazine biosynthesis-like domain-containing protein 2 OS=Mus musculus GN=Pbld2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.261e-27
Identity = 79/214 (36.92%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   97 VVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAAD--SPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEV-SLIHKALSVSSVMDMKITTTSGDIFV---------VLPSAKSVTDVEPQLDEIRKCPGKSIIVSG 702
            + DAFT +AF+GNPAAVCLLE   DE+  Q +A E N+S+T ++ +L   D  + + RF LRWFTP AE  LCGHATLA+A  LF +    ++ + F T+SG L A+++ D                   I LDFP  PT   +F EV  LI  A+  + V D++ +  + ++ V          L S K  T+  P +++  K  G  + V G
Sbjct:    7 IADAFTATAFRGNPAAVCLLERTLDEDAHQDIAREMNLSETAFVRKLQPTDDFTQSSRFGLRWFTPEAEFPLCGHATLASAAVLFQKRKNTNSTLTFVTMSGELKARREED------------------GIVLDFPVYPTFPQDFHEVEDLIKAAIGDTLVQDIRYSPDTKNLLVRLSDSYDRSFLESLKVNTEPLPAIEKTGKVRGLILTVKG 202          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: PBLD_RAT (Phenazine biosynthesis-like domain-containing protein OS=Rattus norvegicus GN=Pbld PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25
Identity = 79/214 (36.92%), Postives = 112/214 (52.34%), Query Frame = 1
Query:   97 VVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAADS--PNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEV-SLIHKALSVSSVMDMKITTTSGDIFV---------VLPSAKSVTDVEPQLDEIRKCPGKSIIVSG 702
            + DAFT +AF GNPAAVCLLE    E+  Q +A E N+S+T ++ +L   DS   +  F LRWFTPV+EV LCGHAT+A+A  LF +    ++ + F TLSG L A++  D                   I LDFP  PT   +F EV  LI  A+  ++V D++ +  +  + V          L S K  T+  P +++  K  G  + V G
Sbjct:    7 IADAFTVTAFHGNPAAVCLLESILQEDAHQQIAREMNLSETAFIRKLQPTDSFSQSSCFGLRWFTPVSEVPLCGHATMASAAVLFHKIKNVNSTLTFVTLSGELKARRAED------------------GIVLDFPLYPTFPQDFHEVKDLIKAAIGDTTVQDIQYSPDTRKLLVRLSDSYDRSFLESLKVNTEPLPGIEKTGKVKGLILTVKG 202          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: Y283_BACHD (Uncharacterized isomerase BH0283 OS=Bacillus halodurans GN=BH0283 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.978e-24
Identity = 75/202 (37.13%), Postives = 105/202 (51.98%), Query Frame = 1
Query:   97 VVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAADSPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNS-NIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEVSLIHKALSVSSVMDMKITTTSGDIFVVLPSAKSVTDVEPQLDEIRKCPGKSIIVS 699
            VVDAFT+ AFKGNPAAVC+L   RD+ W+Q VASE N+S+T +L            + LRWFTP  EV+LCGHATLA+AH L+    +++   I F T SGILTA             S+ GE     +IELDFP+      N     LI        +  + +     D  + + S + + ++ P    + +   + IIV+
Sbjct:    8 VVDAFTNQAFKGNPAAVCVLPTSRDDIWMQHVASEMNLSETAFL------HPYQDGYSLRWFTPNTEVDLCGHATLASAHILWELDHISAEQPITFYTKSGILTA-------------SKRGE-----WIELDFPSEQPKQENVYPNELIDGL----GIQPLYVGRNRFDYLIEIDSEQRLKELNPNFSLLEQIDTRGIIVT 181          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: PBLD_PONAB (Phenazine biosynthesis-like domain-containing protein OS=Pongo abelii GN=PBLD PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = 1
Query:   97 VVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAAD--SPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEV-SLIHKALSVSSVMDM 579
            + DAFT  AF+G+PAAVCLLE + DE+  Q +A E N+S+T ++ +L   D  + +  F LRWFTP +EV LCGHATLA+A  LF +    ++++ F TLSG L A++  D                   I LDFP  P    +F EV  LI  A+  + V D+
Sbjct:    7 IADAFTARAFRGDPAAVCLLENELDEDMHQKIAREMNLSETAFIRKLHPTDNFAQSSCFGLRWFTPASEVPLCGHATLASAAVLFHKIKNMTSMLTFVTLSGELRARRAED------------------GIILDFPLYPAHPQDFHEVEDLIKTAIGNTLVQDI 152          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: PBLD_HUMAN (Phenazine biosynthesis-like domain-containing protein OS=Homo sapiens GN=PBLD PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23
Identity = 67/164 (40.85%), Postives = 91/164 (55.49%), Query Frame = 1
Query:   97 VVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAAD--SPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEV-SLIHKALSVSSVMDM 579
            + DAFT  AF+GNPAAVCLLE + DE+  Q +A E N+S+T ++ +L   D  + +  F LRWFTP +EV LCGHATLA+A  LF +    ++ + F TLSG L A++  D                   I LD P  P    +F EV  LI  A+  + V D+
Sbjct:    7 IADAFTARAFRGNPAAVCLLENELDEDMHQKIAREMNLSETAFIRKLHPTDNFAQSSCFGLRWFTPASEVPLCGHATLASAAVLFHKIKNMNSTLTFVTLSGELRARRAED------------------GIVLDLPLYPAHPQDFHEVEDLIKTAIGNTLVQDI 152          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: PBLD_BOVIN (Phenazine biosynthesis-like domain-containing protein OS=Bos taurus GN=PBLD PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 68/177 (38.42%), Postives = 93/177 (52.54%), Query Frame = 1
Query:   97 VVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAAD--SPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEV-SLIHKALSVSSVMDMKITTTSGDIFVVL 618
            + DAFT  AF+GNPAAVCLLE   DE+  Q +A E N+S+T ++ +L   D  + +  F LRWFTP  EV LCGHATLA+A  LF +     + + F T+SG L A+K+ D                   I LD P  P       EV  LI  A+  + V D++ +  +  + V L
Sbjct:    7 IADAFTTKAFRGNPAAVCLLENKLDEDLHQKIAKEMNLSETAFIRKLHPNDNFTQSSCFGLRWFTPQNEVPLCGHATLASAAVLFHKIKNVHSTLTFVTMSGELKARKEED------------------GIVLDLPLYPAHPQKLHEVEDLIKTAIGDTLVQDVRYSPDTKKLLVRL 165          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: Y2770_PSEAE (Uncharacterized isomerase PA2770 OS=Pseudomonas aeruginosa GN=PA2770 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.733e-20
Identity = 68/200 (34.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:  100 VDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAADSPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEVSLIHKALSVSSVMDMKITTTSGDIFVVLPSAKSVTDVEPQLDEIRKCPGKSIIVS 699
            VDAF DS F+GNPAAVC L+   D+E LQA+A E N+S+T ++         +  +RLRWFTP  EV+LCGHATLA A  L  +    S ++ FAT SG L+ +++ D  AM                  DFP          +  L  +AL ++    +K    + D  VV+   K++  + P    ++  P + + V+
Sbjct:    8 VDAFADSPFQGNPAAVCPLDAWLDDERLQAIAEENNLSETAFVV------GRDGDYRLRWFTPQVEVDLCGHATLATAWVLIHKLDDASPVLRFATRSGELSVRREGDSLAM------------------DFPAKRPEPCATPDGLL--EALGIAEAEVLK----TDDYLVVVDDEKTIAALAPDFARLKGLPCRGVAVT 177          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: YX21_CAUCR (Uncharacterized isomerase CC_3221 OS=Caulobacter crescentus GN=CC_3221 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.282e-19
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  100 VDAFTDSAFKGNPAAVCLLEEDR---DEEWLQAVASEFNISQTCYLTRLTAADSPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMN 438
            +DAF    F+GNPA  C+LE       + W+QA+A+E N ++T YL +    D    RF LRWFTP  E  LCGHATLAAAH LF    V+  ++ F TLSG+LT ++  D   M+
Sbjct:    6 IDAFATGPFRGNPA--CVLEPFDVWPADAWMQALAAENNQAETAYLLKTADPD----RFGLRWFTPTLEAPLCGHATLAAAHVLFEELGVDVAMLSFETLSGVLTVRRADDQLEMD 115          
BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: Y3578_PSEAE (Uncharacterized isomerase PA3578 OS=Pseudomonas aeruginosa GN=PA3578 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17
Identity = 64/205 (31.22%), Postives = 101/205 (49.27%), Query Frame = 1
Query:   85 VQYSVVDAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAADSPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNSNIIEFATLSGILTAKKDPDVKAMNDSNSQNGEAQECYFIELDFPTVPTTDFNFSEVSLIHKALSVSSVMDMKITTTSGDIFVVLPSAKSVTDVEPQLDEIRKCPGKSIIVS 699
            +++  VDAF+   F GNPA V  L+    +E +Q +A+E N+S+T ++ R   A      +R+RWFTP  EV LCGHATLAAAH LF         +EF + SG L   ++ +                   + LDFP    ++   S V L  +AL +  V    +  ++  + V+L S ++V    P    + + P + +IV+
Sbjct:    3 LEFHQVDAFSSRPFSGNPAVVYRLDAWLADELMQMIATEHNLSETAFVVREGEA------WRIRWFTPSVEVALCGHATLAAAHVLFEVYDEPGERLEFISRSGALRVNREDE------------------RLVLDFPAQYPSEVG-STVEL-EQALGLPPV---DVLGSTDKLLVLLESEEAVRACRPDFAALARLPWRGVIVT 178          
The following BLAST results are available for this feature:
BLAST of FC930795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PBLD1_MOUSE6.571e-2837.85Phenazine biosynthesis-like domain-containing prot... [more]
PBLD2_MOUSE3.261e-2736.92Phenazine biosynthesis-like domain-containing prot... [more]
PBLD_RAT3.986e-2536.92Phenazine biosynthesis-like domain-containing prot... [more]
Y283_BACHD1.978e-2437.13Uncharacterized isomerase BH0283 OS=Bacillus halod... [more]
PBLD_PONAB2.187e-2340.85Phenazine biosynthesis-like domain-containing prot... [more]
PBLD_HUMAN3.731e-2340.85Phenazine biosynthesis-like domain-containing prot... [more]
PBLD_BOVIN3.159e-2238.42Phenazine biosynthesis-like domain-containing prot... [more]
Y2770_PSEAE1.733e-2034.00Uncharacterized isomerase PA2770 OS=Pseudomonas ae... [more]
YX21_CAUCR7.282e-1945.69Uncharacterized isomerase CC_3221 OS=Caulobacter c... [more]
Y3578_PSEAE2.342e-1731.22Uncharacterized isomerase PA3578 OS=Pseudomonas ae... [more]

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Properties
Property NameValue
Genbank descriptionC34109B04EF PostHarvP1 Citrus clementina cDNA clone C34109B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930795 ID=FC930795; Name=FC930795; organism=Citrus clementina; type=EST; length=750bp
GGAGGGTTTCATCTCTGCAACTCCAAGTTTCACTTGTCAAACTCTAAACT
TCATTCTTTATTCTGCAACATGGCCAAGAAGCTCGTACAATACTCTGTGG
TGGATGCTTTTACTGACTCAGCTTTCAAGGGGAACCCGGCAGCGGTTTGT
TTGTTAGAGGAAGATAGAGATGAAGAATGGCTACAAGCAGTGGCTTCTGA
GTTCAATATCTCCCAGACCTGTTACTTGACTCGCCTTACTGCTGCTGACT
CTCCTAATCCGAGGTTCCGTCTTAGATGGTTCACTCCTGTTGCTGAGGTT
GAACTTTGTGGTCATGCAACATTAGCAGCTGCACACACTCTCTTTTCGAG
AGGTTTGGTAAACTCCAACATAATTGAATTTGCCACACTGTCTGGAATTC
TAACAGCCAAAAAAGATCCAGATGTTAAGGCGATGAATGACTCTAATTCA
CAGAATGGAGAAGCACAAGAGTGCTATTTTATTGAATTGGATTTTCCTAC
AGTTCCAACTACTGATTTCAATTTTTCTGAGGTTTCATTAATTCATAAGG
CTTTGAGTGTTTCTTCAGTCATGGATATGAAGATAACAACTACCTCAGGA
GACATCTTTGTGGTGCTCCCATCGGCGAAATCTGTTACAGACGTGGAGCC
ACAGCTTGATGAAATACGAAAATGTCCTGGAAAGAGCATAATTGTTTCAG
GGCTTGCTCCTCAGAGTCTGGATTTGATTTTATAGCCGATTCTCTGCCCT
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