FC930802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: FMP32_YEAST (Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae GN=FMP32 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 44/157 (28.03%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 171 QAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRIL 641 QA I +T+ + + +V+ + ++ + Q + +K + ++ S+ F +Q E E +++D+EK+R++LR EI K AG +LDL+LE+GRIR+E ++ + + + K+++E+ ++ +++ K V+++ IG A+ LA +R+L Sbjct: 50 QATTIVEIMTDAIRGGVNHVSQDLAKREKLTQLSYQQRVDFAKLRDQLLSADRSEFHNIQNEYESVKNDLEKLRNKLREEITKTNAGFKLDLSLEKGRIREESSHHDLQIKEIDTKIEQEVTNMKMQIDSVKTQVMQWLIGVCTGTFALVLAYMRLL 206
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: CC90B_XENTR (Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis GN=ccdc90b PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 60/221 (27.15%), Postives = 108/221 (48.87%), Query Frame = 3 Query: 30 QGFNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRD--------------ELANQNAET----TNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRI 638 +GF + + GY + +R DT LVR LE G QAE I +A+ + N S++ V V++ + + T A+L + ++ ++ F+ L+ E EK++ ++E +R L E ++++A +LD+NLER R+ D E +NA T T + K+D +I +L+ ME+ K D ++Y ++ + A+ L R+ Sbjct: 45 KGFATSAALPAGYDVRQVEITPLEQRKLTFDTHALVRELETHGFDKVQAETIVSALATLTNASIDTVYRDMVTRAQQEITVQQIMAHLDSIRKDMVILEKSEFATLRAENEKMKIELEHVRQHLLNETNRISADAKLDMNLERSRLTDLFTEQEKKLMEASTEFHKKNATTDSVITEINKKIDIDIASLKTLMESHKLDTVRYMAASVFTCLAIALGFYRL 265
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: CC90B_HUMAN (Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens GN=CCDC90B PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 55/196 (28.06%), Postives = 101/196 (51.53%), Query Frame = 3 Query: 102 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAE----TTNLT--------------NKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVR 635 +R DT LV+ LE G QAE I +A+T + N SL+ + V++ + + T A+L + ++ ++ F+ L+ E EK++ ++++++ +L +E ++ A +LD+NLER R+ D +Q + TT T NK+D EI +L+ ME+ K + I+Y ++ + A+ L R Sbjct: 56 QRKLTFDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRYLAASVFTCLAIALGFYR 251
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: CC90B_MOUSE (Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus GN=Ccdc90b PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 52/196 (26.53%), Postives = 103/196 (52.55%), Query Frame = 3 Query: 102 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRD--------------ELANQNAETTNL----TNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVR 635 +R DT LV+ LE G QA+ I + ++ + N SL+ + V+K + + T A+L + ++ ++ F+ L+ E EK++ ++++++ +L E ++ A +LD+NLER R+ D E A ++ +T ++ +NK+D EI +L+ ME++K + I+Y ++ + A+ L R Sbjct: 56 QRKLTFDTHALVQDLETHGFDKTQAQTIVSVLSTLSNVSLDTIYKEMVTKAQQEITVQQLMAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLTNETSRIRADNKLDINLERSRVTDMFTDQEKQLIEATNEFAKKDTQTKSIISETSNKIDTEIASLKTLMESSKLETIRYLAASVFTCLAIALGFYR 251
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: CC90B_RAT (Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus GN=Ccdc90b PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 55/196 (28.06%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 102 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQN---AETTN---------------LTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVR 635 +R DT LV+ LE G QA+ I + ++ + N SL+ V V+K + + T A+L + ++ ++ F+ L+ E EK++ ++++++ +L E ++ A RLD+NLER R+ D +Q E TN +NK+D EI +L+ ME++K + I+Y ++ + A+ L R Sbjct: 56 QRKLTFDTHALVQDLETHGFDKGQAQTIVSVLSTLSNVSLDTVYKEMVTKAQQEITIQQLMAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLINETSRIRADNRLDINLERSRVTDMFTDQEKQLMEATNEFTKKDMQTKSIISETSNKIDTEIASLKTLMESSKLETIRYLAASVFTCLAIALGFYR 251
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: CC90A_XENTR (Coiled-coil domain-containing protein 90A, mitochondrial OS=Xenopus tropicalis GN=ccdc90a PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 57/227 (25.11%), Postives = 118/227 (51.98%), Query Frame = 3 Query: 15 RVNQFQGFNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANL-SKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELAN------------------QNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRI 638 RV F+ FN+ ++T+ Y + + ++ + + DT +V+ LEA G ++Q+E + +A+ ++LN ++ + V+K E Q+ + Q +L + K ++ ++ FS L+ + EK++ ++++++ +L I KV A +LD NLE+ R+++ A+ Q+ T K+D E+ ++ E+ K D IKY G++ + + L R+ Sbjct: 36 RVTCFRDFNI-ITSTMQYNLDKRNIYTSVGKHYFFDTHAVVQLLEANGFSAEQSEIVVSALVKILNVNMNLIHKDMVTK-EQQEISLQQVMSLIASVKKDMIILEKSEFSALRTQNEKVKIELQQLKKQLNDSIVKVRASNKLDFNLEKSRVKEMHADNERKLLELRTSIVELHSQQDRGLTQTKRKIDTEVSGVKTMQESHKLDTIKYLAGSVFTCLTIALGFYRL 260
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: FMP32_SCHPO (Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe GN=fmp32 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 46/175 (26.29%), Postives = 97/175 (55.43%), Query Frame = 3 Query: 120 DTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRILM 644 ++L+ VR L+ G+ K++E + I+ V +D E ++ V+K + + Q+ + + +SE+QS + L + E+L SD+E++++ R +++ T+ RL LN++R DE A+Q+ + L+ ++D E+ R + + K +++ G + A+ LA VR+++ Sbjct: 42 NSLRFVRVLQEAGIDDKKSETLMRLISNVYSDMHEKISDFSVTKEQQDRVMYQQKVDFAHLRSELQSIERQEMVALHSQVEQLFSDVERLKTSFRDQLNNSTSEARLQLNIDRLNHYDETASQDLKLRELSAEIDTEMSNFRTQLASFKTQTLQWVFGIVTGSGALLLAYVRLII 216
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: CC90A_HUMAN (Coiled-coil domain-containing protein 90A, mitochondrial OS=Homo sapiens GN=CCDC90A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 54/200 (27.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 93 SNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRD----------EL--------ANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRI 638 S+G R DT LV LE G ++QAE I +A+ ++L +++ V V+K + + T + ++ K ++ ++ FS L+ E EK++ ++ +++ ++ E+ KV +LD NLE+ R+++ EL A Q+ T K++ E+ L+ +E+ K D IKY G++ + V L R+ Sbjct: 158 SSGSRKLYFDTHALVCLLEDNGFATQQAEIIVSALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQTDRKIETEVAGLKTMLESHKLDNIKYLAGSIFTCLTVALGFYRL 357
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: CC90A_MOUSE (Coiled-coil domain-containing protein 90A, mitochondrial OS=Mus musculus GN=Ccdc90a PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 54/198 (27.27%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 105 RAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQE--ANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRD----------EL--------ANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRI 638 R DT LV LEA G +QAE I +A+ ++ ++ + VSK MQ+ +Q+ + ++ K ++ ++ FS L+ E EK++ ++ +++ ++ E+ KV +L+ NLE+ R+++ EL A Q+ T K++ E+ L+ +EA K D IKY G++ + V L R+ Sbjct: 143 RQLYFDTHALVCLLEANGFTIQQAEIIVSALVKITETNMNIIYKDMVSK--MQQEIALQQVLSKIANVKKDMVILEKSEFSALRAENEKIKLELHQLKQQVMDEVTKVRTDTKLNFNLEKSRVKELYSLNEKKMLELRTEIVSLHAQQDRALTQTDRKIETEVAGLKTMLEAHKLDTIKYLAGSVFTCLTVALGFYRL 338
BLAST of FC930802 vs. ExPASy Swiss-Prot
Match: YAN8_SCHPO (Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC3H1.08c PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 42/168 (25.00%), Postives = 83/168 (49.40%), Query Frame = 3 Query: 129 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIV 632 Q R LE G K AE IT + + ++L + K + + Q+ + + +++ +E+ F +++ ++KL ++IEK +S LR ++ + RL+LNLE+GR++D ++N K+ E+ L + K ++ G + +S+V L I+ Sbjct: 41 QSSRRLEQAGYSVKNAETITNLMRTITGEALTELEKNIGFKAKQESVSFQQKRTFLQIRKYLETIEENEFDKVRKSSDKLINEIEKTKSSLREDVKTALSEVRLNLNLEKGRMKDAATSRNTNIHENETKILNEVDILHKEINDMKIQTNQWFTGFVGVVSSVVLIIL 208 The following BLAST results are available for this feature:
BLAST of FC930802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930802 ID=FC930802; Name=FC930802; organism=Citrus clementina; type=EST; length=681bpback to top |