FC930804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930804 vs. ExPASy Swiss-Prot
Match: TC753_ARATH (Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 6.169e-112 Identity = 196/238 (82.35%), Postives = 212/238 (89.08%), Query Frame = 3 Query: 3 VYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNM-----ARS*DPDSCE------NTHVYAFVEHGH 683 VYNPRNRTF+ SCFNSRKLSPVFTGGPGV+EVP IWVDRAG+KANITENFTRQSKFTYGLVMEEITTRDESSHI+ +GQR+LPSGGISADGPPTTLSGTG+DRMAFLQ NITRDNTKFVNGA+VG+R VFQVDQGLGIGSKFPFFNRHQLT+T+F QL++VE+GA K PPPVLVLHGHYGGCVGDLPSYDAF LGGPYSVRGYNM AR+ E NTHVYAFVEHG+ Sbjct: 524 VYNPRNRTFKTSCFNSRKLSPVFTGGPGVEEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEITTRDESSHIAANGQRLLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVGQRTVFQVDQGLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGN 761
BLAST of FC930804 vs. ExPASy Swiss-Prot
Match: TOC75_PEA (Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 2.965e-106 Identity = 190/237 (80.17%), Postives = 203/237 (85.65%), Query Frame = 3 Query: 3 VYNPRNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNM-----ARS*DPDSCE------NTHVYAFVEHG 680 V NPRNRT R SCFNSRKLSPVFTGGPGVDEVP+IWVDRAG+KANITENF+RQSKFTYGLVMEEI TRDES+HI +GQRVLP+G ISADGPPTTLSGTGIDRMAFLQ NITRDNT+FVNG IVG RN+FQVDQGLG+GS FPFFNRHQLT+T+F QL VEEGA K PPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNM AR+ + E THVYAF EHG Sbjct: 515 VDNPRNRTLRVSCFNSRKLSPVFTGGPGVDEVPSIWVDRAGVKANITENFSRQSKFTYGLVMEEIITRDESNHICSNGQRVLPNGAISADGPPTTLSGTGIDRMAFLQANITRDNTRFVNGTIVGSRNMFQVDQGLGVGSNFPFFNRHQLTVTKFLQLMSVEEGAGKSPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEIRIPIKGTHVYAFAEHG 751
BLAST of FC930804 vs. ExPASy Swiss-Prot
Match: TOC75_ORYSJ (Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2) HSP 1 Score: 342.813 bits (878), Expect = 9.895e-94 Identity = 165/233 (70.82%), Postives = 186/233 (79.83%), Query Frame = 3 Query: 15 RNRTFRASCFNSRKLSPVFTGGPGVDEVPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMAR-----------S*DPDSCENTHVYAFVEHG 680 +NRTF+ SCFN+RKLSPVF GP +DE P +WVDR G KANITE+FTRQSKFTYGLV+EEITTRDE++ I HG R +PSGG+S DGPPTTLSGTGIDRMAFLQ NITRDNT+FVNGA++G+R +FQ+DQGLGIGSK PFFNRHQLTLT+F L + E+GA KP P VLVLHGHY GCVGDLPSYDAFTLGGPYSVRGY M S NT+VY FVEHG Sbjct: 527 KNRTFKTSCFNTRKLSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHG 759
BLAST of FC930804 vs. ExPASy Swiss-Prot
Match: TC754_ARATH (Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 4.922e-85 Identity = 157/239 (65.69%), Postives = 182/239 (76.15%), Query Frame = 3 Query: 3 VYNPRNRTFRASCFNSRKLSPVFTGGPGVDE-VPAIWVDRAGLKANITENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMARS*DPDS-----------CENTHVYAFVEHGH 683 V PRNRTF+ S FNSRKLSPVFTGGPG ++ VP ++V R LKA ITEN TRQ + TYG++ EEI TRDE+ IS +G + P GGIS +GPPTTLSGTGID +A LQ NITRDNTK VNGA+VGE+N+FQVDQGLGIG+ FP FNRHQL+LT F QLKQVEEG++KP PPVLVLHG YGGC+GDLPSYD F LGGP SVRGY+M + +NTHVYAF EHG+ Sbjct: 101 VKKPRNRTFKTSFFNSRKLSPVFTGGPGYEDLVPPMFVGRDCLKATITENLTRQRELTYGVMFEEIITRDENRRISENGLLLSPDGGISINGPPTTLSGTGIDHIATLQANITRDNTKLVNGAVVGEKNIFQVDQGLGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCIGDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPVKNTHVYAFAEHGN 339 The following BLAST results are available for this feature:
BLAST of FC930804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930804 ID=FC930804; Name=FC930804; organism=Citrus clementina; type=EST; length=685bpback to top |