FC930816

Overview
NameFC930816
Unique NameFC930816
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15219 contig Ccv1_Contig15219:1..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: AVP1_ARATH (Pyrophosphate-energized vacuolar membrane proton pump 1 OS=Arabidopsis thaliana GN=AVP1 PE=1 SV=1)

HSP 1 Score: 434.106 bits (1115), Expect = 3.734e-121
Identity = 221/233 (94.85%), Postives = 226/233 (97.00%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            AIDAY PISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRA I TVDVLTPKV IGL+VGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPG LVMLTPLIVG FFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAG SEHA++LGPKGS+PHKAAVIGDTIGDPL+
Sbjct:  502 AIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGIHTVDVLTPKVIIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGCLVMLTPLIVGFFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGVSEHAKSLGPKGSEPHKAAVIGDTIGDPLK 734          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: AVP_PHAAU (Pyrophosphate-energized vacuolar membrane proton pump OS=Phaseolus aureus PE=1 SV=3)

HSP 1 Score: 432.18 bits (1110), Expect = 1.419e-120
Identity = 224/233 (96.14%), Postives = 229/233 (98.28%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            AIDAY PISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRA+I+TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPL+VGI FGVETLSGVLAGSLVSGVQIAISASNT GAWDNAKKYIEAGASEHAR+LGPKGSD HKAAVIGDTIGDPL+
Sbjct:  498 AIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNT-GAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLK 729          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: AVP_HORVU (Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 429.483 bits (1103), Expect = 9.198e-120
Identity = 220/233 (94.42%), Postives = 225/233 (96.57%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            AIDAY PISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRA +  VDVL+PKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVG  FGVETLSGVLAG+LVSGVQIAISASNTGGAWDNAKKYIEAG SEHAR+LGPKGSD HKAAVIGDTIGDPL+
Sbjct:  494 AIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVKVVDVLSPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGNSEHARSLGPKGSDCHKAAVIGDTIGDPLK 726          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIN (Pyrophosphate-energized proton pump OS=Leptospira interrogans GN=hppA PE=3 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.366e-83
Identity = 155/232 (66.81%), Postives = 188/232 (81.03%), Query Frame = 3
Query:    9 IDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            IDAY P+SDNAGGIAEMA +   +R+RTD LDAAGNTTAAIGKGFAIGSAAL SLALF AF++R   ++++VL  +VF GL+ GAMLP+ F+AMTMKSVG AA+ MVEEVR+QF  IPG+MEG  KPDY  CV IST A+++EMI PG LV+LTP++VG  FGV+TL+GVLAG+LV+GV +AISA+N+GG WDNAKKYIE  A       G KGSD HKAAV+GDT+GDP +
Sbjct:  443 IDAYGPVSDNAGGIAEMAELGKEVRDRTDTLDAAGNTTAAIGKGFAIGSAALTSLALFAAFITRTHTTSLEVLNAEVFGGLMFGAMLPFLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAGALVAGVVLAISAANSGGGWDNAKKYIEKKA-------GGKGSDQHKAAVVGDTVGDPFK 667          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIC (Pyrophosphate-energized proton pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=hppA PE=3 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.366e-83
Identity = 155/232 (66.81%), Postives = 188/232 (81.03%), Query Frame = 3
Query:    9 IDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            IDAY P+SDNAGGIAEMA +   +R+RTD LDAAGNTTAAIGKGFAIGSAAL SLALF AF++R   ++++VL  +VF GL+ GAMLP+ F+AMTMKSVG AA+ MVEEVR+QF  IPG+MEG  KPDY  CV IST A+++EMI PG LV+LTP++VG  FGV+TL+GVLAG+LV+GV +AISA+N+GG WDNAKKYIE  A       G KGSD HKAAV+GDT+GDP +
Sbjct:  443 IDAYGPVSDNAGGIAEMAELGKEVRDRTDTLDAAGNTTAAIGKGFAIGSAALTSLALFAAFITRTHTTSLEVLNAEVFGGLMFGAMLPFLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAGALVAGVVLAISAANSGGGWDNAKKYIEKKA-------GGKGSDQHKAAVVGDTVGDPFK 667          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_CLOTE (Pyrophosphate-energized proton pump OS=Clostridium tetani GN=hppA PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.643e-76
Identity = 139/233 (59.66%), Postives = 175/233 (75.11%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            A+DAY PI+DNAGGIAEM+ + H +RE TD LD+ GNTTAAIGKGFAIGSAAL +L+LF ++     + ++D+L     +GL +GAMLP+ F A+TM+SVG AA +M+EEVRRQF TIPG+MEG A PDY  CV IST A+I+EMI PG L ++ P+ +G+  G E L G+LAG+LVSGV + I  SN GGAWDNAKKYIE GA       G KGS+ HKAAV+GDT+GDP +
Sbjct:  410 AVDAYGPIADNAGGIAEMSELPHEVREITDKLDSVGNTTAAIGKGFAIGSAALTALSLFASYAQATELESIDILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVLAIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGGAWDNAKKYIEGGAH------GGKGSEAHKAAVVGDTVGDPFK 636          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA1_METAC (Pyrophosphate-energized proton pump 1 OS=Methanosarcina acetivorans GN=hppA1 PE=3 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 4.046e-75
Identity = 139/233 (59.66%), Postives = 172/233 (73.82%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            ++DAY P++DNAGGIAEM+     +R+ TD LDA GNTTAAIGKGFAIGSAAL +LALF ++     +S +DV+ P VFIGL +GAMLPY FS+MT+ +VG+AA ++V EVRRQF  I GLMEG A PDY  C+ IST +++KEMIPPG L ++ PL+VG+  G   L G+LAGS+ SG  IAI+ SN GGAWDNAKKYIE G        G KGSD HKA V GDT+GDP +
Sbjct:  424 SVDAYGPVADNAGGIAEMSHQKEEVRQITDTLDAVGNTTAAIGKGFAIGSAALTALALFASYGIAVGLSAIDVMNPNVFIGLTIGAMLPYLFSSMTILAVGNAAGEVVVEVRRQFREIAGLMEGKADPDYGKCIAISTHSALKEMIPPGLLAVIAPLLVGLVLGPGALGGLLAGSVASGFMIAITMSNAGGAWDNAKKYIELG------NFGGKGSDAHKAGVTGDTVGDPFK 650          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA1_METMA (Pyrophosphate-energized proton pump 1 OS=Methanosarcina mazei GN=hppA1 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.473e-74
Identity = 133/233 (57.08%), Postives = 176/233 (75.54%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            ++DAY P++DNAGGIAEM+     +R+ TD LDA GNTTAA+GKGFAIGSAAL +L+LF ++     ++++DV+ P VFIGLI+GAMLP+ FS+MT+ +VG+AA ++V EVRRQF  I GLMEG A PDY+ C+ IST +++KEMIPPG L ++ P++VG+  G   L G+LAGS+VSG  +AI+ SN GG+WDNAKK+IE G        G KGSD HKA V GDT+GDP +
Sbjct:  424 SVDAYGPVADNAGGIAEMSHQKKEVRQITDTLDAVGNTTAAMGKGFAIGSAALTALSLFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITISTHSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVVSGFMLAITMSNAGGSWDNAKKFIELG------NFGGKGSDAHKAGVTGDTVGDPFK 650          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_FUSNN (Pyrophosphate-energized proton pump OS=Fusobacterium nucleatum subsp. nucleatum GN=hppA PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.171e-68
Identity = 131/238 (55.04%), Postives = 171/238 (71.85%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAIST-----VDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            A+DAY P++DNAGGIAEM+ +   +RE TD LDA GN+TAA+GKGFAIGSAAL +L+LF A+       T     +DV  P+V  GL +G ML + FSA+TM +VG AA++MVEEVRRQF   PG+M+ T KPDY  CV+IST +S+K+MI PG L ++ P+I+G+ + V+ L G+LAG+LV+GV +AI  +N GGAWDN KK IE G          KGSD HKAAV+GDT+GDP +
Sbjct:  411 AVDAYGPVADNAGGIAEMSELPPEVRETTDKLDAVGNSTAAVGKGFAIGSAALTALSLFAAYKEAVDKLTSEALVIDVTDPEVIAGLFIGGMLTFLFSALTMTAVGKAAIEMVEEVRRQFREFPGIMDRTQKPDYKRCVEISTHSSLKQMILPGVLAIIVPVIIGL-WSVKALGGLLAGALVTGVLMAIMMANAGGAWDNGKKQIEGGYKG-----DKKGSDRHKAAVVGDTVGDPFK 642          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA2_METAC (Pyrophosphate-energized proton pump 2 OS=Methanosarcina acetivorans GN=hppA2 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.442e-64
Identity = 125/235 (53.19%), Postives = 169/235 (71.91%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAIS--TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            A+D+Y PI+DNAGGIA+MA +  ++R+ TDALDA GNTT A+ KG+AIGSAAL +LALF  + S+  +   ++++  P V  GL++GA+LP+ FSA+TM +VG AA ++V EVRRQF  IPG+MEGTAKP+Y  CV I T A++ EM  PG L +L PL+VG+  G + L+G+L G +V G  +A+   N GGAWDNAKK IE G        G +GS+ HKAAV+GDT+GDP +
Sbjct:  412 ALDSYGPITDNAGGIAQMANLPAQVRKVTDALDAVGNTTKAVTKGYAIGSAALGALALFADYRSKVNLGGQSLNLDDPVVLAGLLLGALLPFVFSAVTMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHEMAMPGFLAVLVPLLVGLILGPKALAGLLIGLIVVGFMLALMMDNGGGAWDNAKKLIEDG------NHGGRGSEAHKAAVVGDTVGDPFK 640          
The following BLAST results are available for this feature:
BLAST of FC930816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
AVP1_ARATH3.734e-12194.85Pyrophosphate-energized vacuolar membrane proton p... [more]
AVP_PHAAU1.419e-12096.14Pyrophosphate-energized vacuolar membrane proton p... [more]
AVP_HORVU9.198e-12094.42Pyrophosphate-energized vacuolar membrane proton p... [more]
HPPA_LEPIN2.366e-8366.81Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_LEPIC2.366e-8366.81Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_CLOTE1.643e-7659.66Pyrophosphate-energized proton pump OS=Clostridium... [more]
HPPA1_METAC4.046e-7559.66Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
HPPA1_METMA4.473e-7457.08Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
HPPA_FUSNN8.171e-6855.04Pyrophosphate-energized proton pump OS=Fusobacteri... [more]
HPPA2_METAC1.442e-6453.19Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionC34109D01EF PostHarvP1 Citrus clementina cDNA clone C34109D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930816 ID=FC930816; Name=FC930816; organism=Citrus clementina; type=EST; length=739bp
GATAGGCTATTGATGCATATGCTCCCATCAGTGACAATGCTGGAGGCATT
GCTGAGATGGCAGGCATGAGCCACAGAATCAGAGAGAGAACTGATGCTCT
TGATGCTGCAGGAAACACCACTGCAGCTATTGGAAAGGGTTTCGCCATTG
GTTCTGCAGCTCTTGTGTCGCTAGCCCTCTTTGGTGCCTTTGTGAGCCGT
GCAGCTATTTCAACTGTTGATGTGTTGACTCCAAAAGTGTTTATTGGTTT
GATTGTTGGTGCTATGCTTCCTTACTGGTTCTCTGCCATGACAATGAAGA
GTGTGGGAAGTGCAGCTCTTAAAATGGTTGAGGAAGTGCGCAGGCAATTT
AACACCATCCCTGGTCTTATGGAAGGCACTGCCAAACCTGATTATGCTAC
CTGTGTTAAGATCTCCACCGATGCATCCATCAAAGAGATGATCCCACCTG
GTGCCCTTGTCATGCTTACACCCCTTATTGTTGGTATCTTTTTTGGTGTG
GAAACTCTCTCTGGGGTCCTTGCCGGTTCCCTTGTCTCAGGTGTACAGAT
TGCTATCTCTGCATCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGT
ACATTGAGGCTGGCGCTTCAGAGCACGCCAGAACTCTTGGTCCAAAAGGA
TCAGATCCACACAAGGCTGCGGTCATTGGTGACACAATTGGGGATCCATT
AAGGACACATCTGGACCATCACTTACATCCTAATCAGCT
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