FC930817

Overview
NameFC930817
Unique NameFC930817
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y    +DY GE+ TA+NF+     +K  L+G SGKVVNSGPN    FIF Y+DHG P +LG P+G  + A DL  VL++KH + +YK +VFYLEACESGS+F+GLL E+ N+Y
Sbjct:  116 YKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPND-HIFIF-YSDHGGPGVLGSPAGPYIYASDLNEVLKKKHASGTYKNLVFYLEACESGSIFEGLLPEDINVY 226          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y    +DY GE+ T   FF     NK +L+G SGKVV+SGPN    FIF Y+DHG P +LGMP+   + A +LI VL++KH + +YK +VFYLEACESGS+F+GLL E  NIY
Sbjct:  127 YKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGKVVDSGPND-HIFIF-YSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLLEGLNIY 237          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  181 QDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            +DY G    A+NF+     NK +L+G SGKVV+SGPN   F    Y DHG P +LGMP G  L A DL  VL++KH + +YK +VFYLEACESGS+F+GLL ++ NIY
Sbjct:  128 KDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVY--YTDHGGPGVLGMPVGPYLYASDLNEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPDDLNIY 233          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23
Identity = 57/113 (50.44%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y+   +DY G+    +N       NK +L G SGKVV+SGPN   F    Y+DHG P +LGMP+  NL A DL  VL++K+ + +YK +VFYLEACESGS+F+GLL E  NIY
Sbjct:  111 YNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIY--YSDHGGPGVLGMPTSPNLYANDLNDVLKKKYASGTYKSLVFYLEACESGSIFEGLLPEGLNIY 221          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23
Identity = 58/113 (51.33%), Postives = 75/113 (66.37%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y    +DY G++   +N F     +K ++ G SGKVV+SGPN    FIF Y+DHG P +LGMP+   L A DL  VL++KH   +YK +VFYLEACESGS+F+GLL E  NIY
Sbjct:  126 YQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGKVVDSGPND-HIFIF-YSDHGGPGVLGMPTSPYLYANDLNDVLKKKHALGTYKSLVFYLEACESGSIFEGLLPEGLNIY 236          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 1
Query:  181 QDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIYM 495
            +DY G+N T  N F     +K  L G SGKV+NS P    F    Y+DHG P +LGMP+   L A D I VL++KH + SYK +V Y+EACESGS+F+G++ ++ NIY+
Sbjct:  132 KDYTGDNVTTENLFAVILGDKSKLKGGSGKVINSKPEDRIFIY--YSDHGGPGILGMPNMPYLYAMDFIDVLKKKHASGSYKEMVIYVEACESGSVFEGIMPKDLNIYV 238          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21
Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  181 QDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIYM 495
            +DY GE+ T++NFF     +K  + G SGKV+NS P    F    Y+DHG P +LGMP+   L A D I VL++KH +  YK +V Y+EACESGS+F+G++ ++ NIY+
Sbjct:  130 KDYTGESVTSHNFFAVLLGDKSKVKGGSGKVINSKPEDRIFVY--YSDHGGPGVLGMPNMPYLYAMDFIDVLKKKHASGGYKEMVIYVEACESGSIFEGIMPKDLNIYV 236          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 1
Query:  181 QDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIYM 495
            +DY GE+ TA N +     +K ++ G SGKVV+S PN   F    Y+DHG P +LGMP+   L A D I VL++KH A  YK++V Y+EACESGS+F+G++ ++ +IY+
Sbjct:  134 KDYTGEHVTAKNLYAVLLGDKSAVQGGSGKVVDSKPNDRIFLY--YSDHGGPGVLGMPNLPYLYAMDFIEVLKKKHAAGGYKKMVIYVEACESGSIFEGIMPKDVDIYV 240          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.576e-20
Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = 1
Query:  181 QDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIYM 495
            +DY GE+ T  N +     +K  + G SGKV+NS P     FIF Y+DHG P +LGMP+   + A D I VL++KH +  YK +V Y+EACESGS+F+G++ ++ NIY+
Sbjct:  112 KDYTGEDVTPENLYAVILGDKSKVKGGSGKVINSNPED-RIFIF-YSDHGGPGVLGMPNAPFVYAMDFIDVLKKKHASGGYKEMVIYIEACESGSIFEGIMPKDLNIYV 218          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20
Identity = 48/109 (44.04%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  181 QDYNGENCTANNFFC----NKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIYM 495
            +DY G + TA NF+     ++ ++ G SGKV+ S PN   F    YADHG P +LGMP+  ++ A D I  L++KH + +YK +V Y+EACESGS+F+G++ ++ NIY+
Sbjct:  123 KDYTGSSVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVY--YADHGGPGVLGMPNTPHIYAADFIETLKKKHASGTYKEMVIYVEACESGSIFEGIMPKDLNIYV 229          
The following BLAST results are available for this feature:
BLAST of FC930817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
VPE1_PHAVU1.559e-2553.98Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_CITSI7.738e-2553.98Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE_VICSA8.555e-2453.70Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH1.906e-2350.44Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPEG_ARATH5.545e-2351.33Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_SOYBN3.043e-2147.71Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU5.190e-2146.79Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_RICCO1.156e-2046.79Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
LEGU_CANEN2.576e-2045.87Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH9.788e-2044.04Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC34109D02EF PostHarvP1 Citrus clementina cDNA clone C34109D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930817 ID=FC930817; Name=FC930817; organism=Citrus clementina; type=EST; length=694bp
GAGTGAAGGGAAATGGTTTAACTTCTGCTTTGAAAGCCTTTGTTCATCCA
CACATTGCACAATCCATTAGTTTCTTCTCACTGCAGAATCCCTCAGGTGT
TATATATCTTTTTCTTCCTTTTTACTTTTCGAATATTTTCAATAAAATAT
TCATGATCTTTAAGTTATGATTCTCCTTTACAGGACTACAATGGTGAAAA
CTGTACTGCCAACAATTTTTTTTGCAACAAAATTTCTCTTTCAGGGCGCA
GTGGCAAGGTCGTGAATAGTGGTCCAAATCATTGTACATTTTTTATTTTT
AATTATGCAGATCATGGTAGCCCCGAGATGCTTGGAATGCCTTCTGGAGA
TAACCTTTCCGCCAAAGATCTAATTGCAGTGTTAGAAAGGAAGCATGAAG
CTAAATCTTATAAACGCATCGTATTTTACCTTGAAGCCTGTGAATCTGGA
AGCATGTTTGATGGCCTTCTTACAGAAAATAAGAACATATACATGGCCTT
CCCACTCTGCCGTGCTCTGGGGTAATGTAACCGAATGTGCCTGCTGTATC
ACCGCTAACTAGGCTTCCAACTGATCAGACAAGCAAGCCCAAAGTCTACA
ACTTTTGCTTCAAATTCCTTATTGAGCAAAATGTTGCTTACTTTGCTCCA
CGAATCATCTGTAGTGATGTCAAAGTGAGCAGCATTTTTGCTCA
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