FC930821

Overview
NameFC930821
Unique NameFC930821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15221 contig Ccv1_Contig15221:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.332e-45
Identity = 97/189 (51.32%), Postives = 129/189 (68.25%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGE-FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN 561
            +V   VD AV++FGKLD+M+NNAG+       + +  K D ER++ VN +G FLG KHAARV+ P ++G I+ TAS  + ++G  S AYT SK+ ++G  +  A ELG++GIRVNCVSP G+AT ++    G+D   IE+ M+   NLKG   LK D IA AAL+LASD+  YVSGQNL VDGG SVVN
Sbjct:   78 DVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVN 266          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.857e-39
Identity = 85/194 (43.81%), Postives = 119/194 (61.34%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM-------SQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN 561
            ++ N VD AV  FG LDI+ NNAG+       I +   S+ E   +VN  G FL  KHAARV++P++KG I+   S    + G+G  +Y  SK+ +LGL + +AAELGQ+GIRVNCVSPY +AT +++    +    E +        +   NLKG  L  D +ANA L+LASD+S Y+SG NL++DGGF+  N
Sbjct:   85 DISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTN 278          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.257e-33
Identity = 87/212 (41.04%), Postives = 120/212 (56.60%), Query Frame = 1
Query:    1 EVINLVDTAVSKFG-KLDIMYNNAGILDR---SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPAL-----------------------IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            +V   VD A+S+ G +LD+  NNAG+L R   +  SIL    ++ +R++ VN +G  LG KHAAR + P++ G I+  AS    + GLG  AYT SK+ I+GL K  A EL  +G+RVNCVSP+G+AT M   + + G D A                        +E  +  +  LKG  L+   IA A L+LASDE+ Y+SG NLVVDGG
Sbjct:  115 DVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 326          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.518e-22
Identity = 62/182 (34.07%), Postives = 103/182 (56.59%), Query Frame = 1
Query:   13 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 555
            ++     +FG +DI+ NNAGI       +LD  ++D + +I+VN    F  +  AA++++PQ+ G I+   S  + + G  SPAY+ +K+ + G  K    ELGQY I+VN ++P   AT +++    +P   +  +  +  N  G+   T  +  AA++LAS  S+YV+G  LVVDGG+ V
Sbjct:   84 IIAACCERFGTVDILVNNAGIC--KLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGD---TQDLMGAAVFLASPASNYVNGHLLVVDGGYLV 260          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.518e-22
Identity = 67/190 (35.26%), Postives = 104/190 (54.74%), Query Frame = 1
Query:   10 NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 552
            N + +AV KFG LD++ NNAGI       I +   S+  +++NVN  G FL +KHA + ++   KG I+ T S    +A    PAY  SK G+L L + +A +  ++ IRVNCV P  + T ++ K     + +E++   +  +K E  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:   69 NAIRSAVDKFGGLDVLINNAGI--EIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 251          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.862e-21
Identity = 67/188 (35.64%), Postives = 102/188 (54.26%), Query Frame = 1
Query:   16 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 552
            V++AV  FG LD++ NNAGI       I +   SD  +++ VN  G FL +KHA + ++   KG I+ T S    +A    PAY  SK G+L L K +A +  ++ IRVNCV P  + T ++ K     + +E++   +  +K E  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:   71 VESAVHTFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 251          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20
Identity = 63/177 (35.59%), Postives = 97/177 (54.80%), Query Frame = 1
Query:   16 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            VDTAV+ FG L ++ NNAGIL+   G+I D   ++ +R+++VN  G FLG +   + +    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN + P  + T M+    V   + ++++       G   +   ++N  +YLASDESSY +G   VVDGG
Sbjct:   72 VDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT--DWVPEDIFQTAL-------GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20
Identity = 63/177 (35.59%), Postives = 97/177 (54.80%), Query Frame = 1
Query:   16 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            VDTAV+ FG L ++ NNAGIL+   G+I D   ++ +R+++VN  G FLG +   + +    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN + P  + T M+    V   + ++++       G   +   ++N  +YLASDESSY +G   VVDGG
Sbjct:   72 VDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT--DWVPEDIFQTAL-------GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20
Identity = 61/185 (32.97%), Postives = 101/185 (54.59%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 555
            ++  +V+  V K+G++D++ NNAGI   +   ++   + D + +INVN  G F   +     ++ Q+ G I+  +S        G   Y  SK G++G+ K  A EL    IRVN V+P  + T M+ K  +     E+++S++    G F K + +A   L+LASDESSYV+GQ + +DGG  +
Sbjct:   68 QIKEVVEKVVQKYGRIDVLVNNAGITRDAL--LVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEK--LPEKARETALSRIP--LGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGGLVI 246          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.499e-19
Identity = 66/191 (34.55%), Postives = 100/191 (52.36%), Query Frame = 1
Query:   10 NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE-LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 552
            N + +AV KFG LD++ NNAGI       I +   SD  +++NVN  G FL +KHA + ++   KG I+ T S    +A    PAY  SK G+L          + ++ IRVNCV P  + T ++ K     + +E++   +  +K E  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:   69 NAILSAVDKFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 252          
The following BLAST results are available for this feature:
BLAST of FC930821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
MOMAS_ORYSJ6.332e-4551.32Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH8.857e-3943.81Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE4.257e-3341.04Sex determination protein tasselseed-2 OS=Zea mays... [more]
YGCW_ECOLI1.518e-2234.07Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
BACC2_BACSU1.518e-2235.26Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACSU2.862e-2135.64Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
HSD_MYCTU7.050e-2035.593-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO7.050e-2035.593-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
FABG_THEMA9.208e-2032.973-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
BACC_BACAM3.499e-1934.55Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionC34109D06EF PostHarvP1 Citrus clementina cDNA clone C34109D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930821 ID=FC930821; Name=FC930821; organism=Citrus clementina; type=EST; length=672bp
GAAGTCATCAATCTCGTTGATACCGCCGTTTCTAAATTTGGAAAGCTCGA
TATCATGTACAACAATGCAGGAATTCTTGACCGCAGCTTTGGGAGCATTT
TGGACACTCCAAAGTCTGATCTAGAACGCTTAATTAATGTAAACACTATA
GGTGGTTTCTTAGGAGCCAAGCATGCTGCAAGAGTCGTGGTGCCACAGCA
AAAAGGTTGCATACTGTTTACAGCTAGTGCTTGTACAGAAATTGCAGGGC
TTGGCTCCCCTGCTTATACAATATCCAAATATGGGATTTTAGGACTAGTA
AAGTGCTTGGCAGCAGAGCTTGGACAGTATGGAATAAGAGTAAATTGCGT
CTCGCCTTATGGTTTGGCGACAGGAATGTCGATGAAAGGTGGGGTCGATC
CGGCTCTAATAGAATCATCAATGAGCCAGATGGGTAATCTAAAAGGGGAA
TTTCTAAAAACTGATGGCATTGCAAATGCTGCCCTCTATTTGGCTAGTGA
TGAATCAAGTTATGTGAGCGGGCAAAATCTTGTTGTGGATGGAGGATTCA
GCGTGGTGAATCCTACAGTTATGAGGGCTTACGGTCTTATCAAGTAATCA
ATTGGAGCTTTAATTTGTAGATAATGGGGGATGCCGTACTCTGCTGCGTA
CGTGTAAGAATGCATTCATTTT
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