FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..695. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.133e-60
Identity = 122/179 (68.16%), Postives = 143/179 (79.89%), Query Frame = 2
Query:  152 TAIQTPQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            +A +   PA ++ +      FN+LI+ LI RVDL+E EA++SL++LLNEA+EALISAFLVLLRAKGET+ EIVGLARAM+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            DVLEALGVV+DL PEG++RCV+E GIGFMMS  YHP MK V
Sbjct:   88 SAAEALPPACANASPSSIKSFNQLIETLIDRVDLSETEAESSLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEEGGIGFMMSPMYHPAMKIV 266          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.059e-34
Identity = 78/162 (48.15%), Postives = 109/162 (67.28%), Query Frame = 2
Query:  203 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            TP + E++  L++R DLTEAEA  ++  +++ EA +A I+AF V LRAKGE+  E+ GL+  M+  A  V  +G+A+DIVG+GGD A+TVNIST A+I+AAA G  VAK             D+LEALGV IDLD  GV RC++ AGIGF  +  +HP +++
Sbjct:    5 TPSWPEVLSALLARRDLTEAEAAWAMHQIMSGEATDAQIAAFAVALRAKGESAEEVSGLSSVMLALAAPVPPIGEALDIVGSGGDRAHTVNISTMAAIVAAATGVVVAKHGNRAASSACGSADLLEALGVAIDLDGAGVARCIERAGIGFCFAPVFHPSLRY 166          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.885e-31
Identity = 76/157 (48.41%), Postives = 98/157 (62.42%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            E I  +++R DLT+AEA + ++ ++N  A  A I+AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ +AGIGFM + K+HP M+F
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMNGTATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLRDAGIGFMFAPKFHPAMRF 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CHLSY (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 76/157 (48.41%), Postives = 97/157 (61.78%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ EAGIGFM + K+HP M+F
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFHPAMRF 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAA (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 76/157 (48.41%), Postives = 97/157 (61.78%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ EAGIGFM + K+HP M+F
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFHPAMRF 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30
Identity = 70/153 (45.75%), Postives = 99/153 (64.71%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            +  ++++  LT  EA++  + +LN +D   I+AFL +L+ +GET  EI G+  A+ K AT V+    A+DIVGTGGD ANTVNISTG++IL+AACG  +AK             DVLEALG+ I++ PE +  C+ E GIGFM +  YHP +K
Sbjct:    6 LQSIMNQSHLTYDEAESVTNLMLNGSDPHQIAAFLAVLKYRGETPTEIAGMVSALQKQATSVDLPFPALDIVGTGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTPEELLSCIQEVGIGFMFAPIYHPSLK 158          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.644e-30
Identity = 71/153 (46.41%), Postives = 97/153 (63.40%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            +  ++++  LT  E ++  + +LN AD   I+AFL +L+ +GET  E+ G+  A+ K AT V     A+DIVGTGGD ANTVNISTG++ILAAACG  +AK             DVLEALG+ I++ PE +  CV E GIGFM +  YHP +K
Sbjct:    6 LQSIMNQSHLTYDEVESVTNLMLNGADPHQIAAFLAVLKYRGETPTEVAGMISALQKQATPVNLPFPALDIVGTGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSPEELLSCVQEVGIGFMFAPIYHPSLK 158          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_SACEN (Anthranilate phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30
Identity = 73/155 (47.10%), Postives = 99/155 (63.87%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            L+  L++  DL+  +   ++D ++  EA  A ++AF+V LRAKGET  E+ G+A AM+ ++  +E    AVDIVGTGGD + +VNIST ASI+ AA G  V K             DVLEALGV IDL PEGVRRCV++ GIGF  +  +HP M+
Sbjct:   11 LLGHLVAGNDLSAEDTAWAMDLVMTGEATPARVAAFVVALRAKGETPAEVRGMADAMLSHSRPLEIRRRAVDIVGTGGDRSGSVNISTMASIVVAAAGVPVVKHGNRAASSKCGTADVLEALGVAIDLPPEGVRRCVEDLGIGFCFAPVFHPAMR 165          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_ROSCS (Anthranilate phosphoribosyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28
Identity = 70/148 (47.30%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            DLTE +A  +++ ++   A  A ++A L  L  KGET  EI G+AR M   A  V   G  +D  GTGGD A T NIST A+ +AA  GA VAK             DVLE LGV IDLD  GV RC+++AGIGFM + K+HP M+FV
Sbjct:   15 DLTEEQAAEAMEEIMTGVATPAQVAALLTALHLKGETDAEIAGMARVMRAKAIPVHFDGPLLDTCGTGGDSAGTFNISTTAAFIAAGAGATVAKHGNRAMSSVCGSADVLEGLGVTIDLDAAGVARCLEQAGIGFMFAQKFHPAMRFV 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_HERA2 (Anthranilate phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28
Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            + I  + +R DL++ +A A ++ ++N EA  A I+A L  L  KGET  EI G+A+ M   +  V   G  VD  GTGGD +NT NIST A+ +AA  GA VAK             DVLE LGV I+LD EGV RC+ +AGIGFM + K+HP M++
Sbjct:    5 DAIITVTNRTDLSQDDAAAVMEQMMNGEATPAQIAALLTALHFKGETDAEIAGMAQVMRAKSLAVPHDGGVVDTCGTGGDHSNTFNISTTAAFVAAGAGATVAKHGNRAMSSKCGSADVLEGLGVNIELDAEGVARCLRQAGIGFMFAPKFHPAMRY 161          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARATH1.133e-6068.16Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_ACIC14.059e-3448.15Anthranilate phosphoribosyltransferase OS=Acidothe... [more]
TRPD_CHLAD1.885e-3148.41Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLSY4.200e-3148.41Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLAA4.200e-3148.41Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLFF3.556e-3045.75Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLCV4.644e-3046.41Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_SACEN7.921e-3047.10Anthranilate phosphoribosyltransferase OS=Saccharo... [more]
TRPD_ROSCS2.548e-2847.30Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_HERA22.548e-2845.22Anthranilate phosphoribosyltransferase OS=Herpetos... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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