FC930838

Overview
NameFC930838
Unique NameFC930838
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15470 contig Ccv1_Contig15470:237..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930838 vs. ExPASy Swiss-Prot
Match: PPA29_ARATH (Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.455e-36
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 2
Query:    2 GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 274
            GDVK+VF GHDHVNDFCG L G+ LCYGGGFGYHAYGKAGWERRARVVV  L K  K  WG VKSIKTWKRLDD+HL+ +D  VLW+ +++
Sbjct:  294 GDVKSVFVGHDHVNDFCGELKGLNLCYGGGFGYHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLWNNSAN 384          
BLAST of FC930838 vs. ExPASy Swiss-Prot
Match: PPA28_ARATH (Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28
Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 2
Query:    2 GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSGMR 283
            G+VKA F GHDHVNDFCG L G+  CYGGGFGYHAYG+  W RRARV+ A L K  +  W  +K IKTWKRLDDE+L+ +D  VLW  + S ++
Sbjct:  305 GNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLGK-GRDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDSFLK 397          
BLAST of FC930838 vs. ExPASy Swiss-Prot
Match: PPA14_ARATH (Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.214e-28
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 2
Query:    2 GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 274
            G+VK VF+GHDHVNDFC  L GI LCY GG GYH YG+ GW RR RVV A LEKT    WG V +IKTWKRLDD++ + +D  +LW+K ++
Sbjct:  296 GEVKGVFSGHDHVNDFCAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKNHSLIDTQLLWTKNTT 386          
The following BLAST results are available for this feature:
BLAST of FC930838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PPA29_ARATH2.455e-3672.53Probable inactive purple acid phosphatase 29 OS=Ar... [more]
PPA28_ARATH2.461e-2859.57Probable inactive purple acid phosphatase 28 OS=Ar... [more]
PPA14_ARATH3.214e-2860.44Probable inactive purple acid phosphatase 14 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionC34109E12EF PostHarvP1 Citrus clementina cDNA clone C34109E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930838 ID=FC930838; Name=FC930838; organism=Citrus clementina; type=EST; length=679bp
AGGGGATGTGAAGGCTGTTTTCACAGGCCATGATCATGTCAATGATTTCT
GTGGCCGGCTTACTGGTATACAACTCTGTTATGGTGGGGGTTTTGGATAC
CATGCCTATGGAAAGGCTGGATGGGAGAGGAGGGCAAGGGTGGTTGTAGC
CAGTTTGGAGAAAACAGAGAAGAGAGGCTGGGGAGATGTCAAGTCAATCA
AAACATGGAAGCGCCTTGATGATGAACACCTAACTGGTGTTGATGGTCAT
GTCCTCTGGAGTAAGACCTCTTCAGGTATGCGCAGAAGGAAACACACTAA
TGGTGCTTGAGTGATTCAAGCGGGACCTGTGTTTCTTATGTGGACTTGGA
ACCGGCGACCTGGCTGTAGGAAATATGTTATTTTGAGTATGGTTCAGTGG
CAATACTGTCAATGGCATTGTTGTTTAGGAGTTGAATGTGTTATACACAT
CTTCGAAACGACAGTGATGTAATATACCTTGGAAGAAAAAGCAGAGAACA
AGGTTAGGATGAGAAAATTCTGTTTTGCTCCCGGTAGGATGAGAAAATTC
TGTTTTGCTCCCAGAGCTTTTGCCACGAGCTCTTGGATGAATAAAGATGT
GATTGTAGTTATTTTGGAAATGATGTTGATCTTTATGGGTTATGACCGAC
AATAAGCTATATAAAGTCCCATATGCTCT
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