FC930841

Overview
NameFC930841
Unique NameFC930841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14117 contig Ccv1_Contig14117:188..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_SOYBN (Phosphomannomutase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.390e-106
Identity = 189/217 (87.10%), Postives = 200/217 (92.17%), Query Frame = 1
Query:   52 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLLG-TNLQGGNDH 699
            MAAR+ GL+ALFDVDGTLTAPRK  TP+ML FM+ELRKVVTVGVVGGSDL KISEQLG TV ++YDYVFSENGLVAHK+GKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLD FNE    G    +GGNDH
Sbjct:    1 MAARRPGLIALFDVDGTLTAPRKVVTPEMLTFMQELRKVVTVGVVGGSDLIKISEQLGSTVTNDYDYVFSENGLVAHKEGKLIGTQSLKSFLGEEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDH 217          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_TOBAC (Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.922e-104
Identity = 186/217 (85.71%), Postives = 198/217 (91.24%), Query Frame = 1
Query:   52 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLLG-TNLQGGNDH 699
            MAARK GL+ALFDVDGTLTAPRK  TP+ML+FM+ELRKVVTVGVVGGSDL KISEQLGKTV  +YDY FSENGLVAHKDGKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGR+CSQEERDEFE+YDK+H IR  MVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++FNE    G    +GGNDH
Sbjct:    1 MAARKPGLIALFDVDGTLTAPRKEVTPEMLKFMKELRKVVTVGVVGGSDLVKISEQLGKTVTTDYDYCFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRDCSQEERDEFEKYDKVHKIRQTMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDH 217          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_SOLLC (Phosphomannomutase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 1.603e-102
Identity = 184/217 (84.79%), Postives = 196/217 (90.32%), Query Frame = 1
Query:   52 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLLG-TNLQGGNDH 699
            MAARK GL+ALFDVDGTLTAPRK +TPQML+FM+ELRKVVTVGVVGGSDL KISEQLG TV ++YDYVFSENGLVAHKDGKLIG QSLKS LG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+  IR  MVSVLREKFAH NLTFSIGGQISFDVFPQGWDKTYCLRYL++FNE    G    +GGNDH
Sbjct:    1 MAARKAGLIALFDVDGTLTAPRKESTPQMLKFMQELRKVVTVGVVGGSDLVKISEQLGNTVTNDYDYVFSENGLVAHKDGKLIGKQSLKSHLGDEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQKIRETMVSVLREKFAHFNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFNEIHFFGDKTYKGGNDH 217          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_WHEAT (Phosphomannomutase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.357e-101
Identity = 180/217 (82.95%), Postives = 199/217 (91.71%), Query Frame = 1
Query:   55 AARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLLG-TNLQGGNDH 699
            AARK  G+LALFDVDGTLTAPRK  TP+MLEFM+ LR+ VTVGVVGGSDL KISEQLGK+VI +YDYVFSENGLVAHKDGKLIGTQSLK++LG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGM+N+SPIGRNCSQEERD+FE+YDK+HN+RPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++F E    G    +GGNDH
Sbjct:    3 AARKDAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFKEIHFFGDKTYKGGNDH 219          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_ORYSJ (Phosphomannomutase OS=Oryza sativa subsp. japonica GN=PMM PE=2 SV=2)

HSP 1 Score: 365.925 bits (938), Expect = 1.149e-100
Identity = 180/218 (82.57%), Postives = 199/218 (91.28%), Query Frame = 1
Query:   52 MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLLG-TNLQGGNDH 699
            MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK+V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++F E    G    +GGND+
Sbjct:    1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDY 218          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_ORYSI (Phosphomannomutase OS=Oryza sativa subsp. indica GN=PMM PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.149e-100
Identity = 180/218 (82.57%), Postives = 199/218 (91.28%), Query Frame = 1
Query:   52 MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLLG-TNLQGGNDH 699
            MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK+V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL++F E    G    +GGND+
Sbjct:    1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEEFQEIHFFGDKTYKGGNDY 218          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_ARATH (Phosphomannomutase OS=Arabidopsis thaliana GN=PMM PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.404e-98
Identity = 174/217 (80.18%), Postives = 196/217 (90.32%), Query Frame = 1
Query:   52 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLLG-TNLQGGNDH 699
            MAA+  G++ALFDVDGTLTAPRK ATP++L+F+RELRKVVT+GVVGGSDLSKISEQLGKTV ++YDY FSENGLVAHKDGK IG QSLK  LG +KLKE INFTLHYIADLDIPIKRGTFIEFR+GMLN+SPIGRNCSQEERDEFERYDK+ NIRPKMV+ LRE+FAHLNLTFSIGGQISFDVFP+GWDKTYCL+YL+DF+E    G    +GGND+
Sbjct:    1 MAAKIPGVIALFDVDGTLTAPRKEATPELLDFIRELRKVVTIGVVGGSDLSKISEQLGKTVTNDYDYCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTFIEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQISFDVFPKGWDKTYCLQYLEDFSEIHFFGDKTYEGGNDY 217          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM1_DICDI (Phosphomannomutase 1 OS=Dictyostelium discoideum GN=pmmA PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.861e-75
Identity = 135/211 (63.98%), Postives = 165/211 (78.20%), Query Frame = 1
Query:   76 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEFTLLG-TNLQGGNDH 699
            + LFDVDGTLT PR   TP+M +F+  LR  V +GVVGGSD++KI EQLG+  I+E+ Y+F+ENGL++ KDG L+ TQ +K FLG E +K+FINF LHYIADLDIPIKRGTF+EFR+GM+NISPIGRNCSQ+ER+EFE+YD  H IRP MVS+L+EKF  L L +SIGGQISFDVFP GWDKTYCLR+L  D +      G     GGND+
Sbjct:    8 ICLFDVDGTLTKPRNVITPEMKDFLAGLRTKVELGVVGGSDINKIKEQLGENCINEFHYLFAENGLLSFKDGSLLATQDIKKFLGEENIKKFINFVLHYIADLDIPIKRGTFVEFRNGMINISPIGRNCSQQEREEFEKYDLEHKIRPTMVSILKEKFQSLGLQYSIGGQISFDVFPIGWDKTYCLRHLPEDKYKTIYFFGDKTFVGGNDY 218          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM2_DICDI (Phosphomannomutase 2 OS=Dictyostelium discoideum GN=pmmB PE=3 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.729e-72
Identity = 130/217 (59.91%), Postives = 165/217 (76.04%), Query Frame = 1
Query:   58 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEFTLLG-TNLQGGNDH 699
            ++ +  + LFDVD TLT PR A T +M E +  LR  + +GVVGGS+ +KI EQLG+  I+++DYVF+ENGL+A+KDG L+  Q +K +LG E +K+FINF LHY+ADLDIPIKRGTF+EFR+GMLNISPIGRNCSQ+ER+EFE+YD  H IR  MVS+L+E+F    L +SIGGQISFDVFP GWDKTYCLR+L  D+F      G     GGND+
Sbjct:    2 SQNKNTICLFDVDDTLTKPRNAITNEMKELLASLRTKIKIGVVGGSNFNKIKEQLGENFINDFDYVFAENGLIAYKDGSLLEIQDIKKYLGEENIKKFINFVLHYVADLDIPIKRGTFVEFRNGMLNISPIGRNCSQQEREEFEKYDLEHKIRSTMVSILKEEFKSFGLQYSIGGQISFDVFPIGWDKTYCLRHLPEDEFKTLYFFGDKTFLGGNDY 218          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_SCHPO (Phosphomannomutase OS=Schizosaccharomyces pombe GN=pmm1 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.817e-68
Identity = 129/214 (60.28%), Postives = 162/214 (75.70%), Query Frame = 1
Query:   76 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQL---GKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEFTLLG-TNLQGGNDH 699
            L LFDVDGTLT  R + +P+MLE ++ LRKVV +G VGGSDLSK  EQL   G+ VID +DY F+ENGL A++ G+ + +QS  ++LG EK ++ +NF LHYIADLDIP+KRGTFIEFR+GM+NISP+GRN + EER+EFER+DK   IR  MV VLREKF    LTFSIGGQISFDVFP GWDKTYCL+++  + F+     G    +GGND+
Sbjct:   15 LVLFDVDGTLTPARLSVSPEMLETLQNLRKVVAIGFVGGSDLSKQQEQLSVNGENVIDSFDYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFKDYGLTFSIGGQISFDVFPAGWDKTYCLQHVEKEGFDTIHFFGDKTYKGGNDY 228          
The following BLAST results are available for this feature:
BLAST of FC930841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM_SOYBN2.390e-10687.10Phosphomannomutase OS=Glycine max PE=2 SV=1[more]
PMM_TOBAC2.922e-10485.71Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1[more]
PMM_SOLLC1.603e-10284.79Phosphomannomutase OS=Solanum lycopersicum PE=2 SV... [more]
PMM_WHEAT1.357e-10182.95Phosphomannomutase OS=Triticum aestivum PE=2 SV=1[more]
PMM_ORYSJ1.149e-10082.57Phosphomannomutase OS=Oryza sativa subsp. japonica... [more]
PMM_ORYSI1.149e-10082.57Phosphomannomutase OS=Oryza sativa subsp. indica G... [more]
PMM_ARATH1.404e-9880.18Phosphomannomutase OS=Arabidopsis thaliana GN=PMM ... [more]
PMM1_DICDI4.861e-7563.98Phosphomannomutase 1 OS=Dictyostelium discoideum G... [more]
PMM2_DICDI1.729e-7259.91Phosphomannomutase 2 OS=Dictyostelium discoideum G... [more]
PMM_SCHPO9.817e-6860.28Phosphomannomutase OS=Schizosaccharomyces pombe GN... [more]

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Properties
Property NameValue
Genbank descriptionC34109F03EF PostHarvP1 Citrus clementina cDNA clone C34109F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930841 ID=FC930841; Name=FC930841; organism=Citrus clementina; type=EST; length=699bp
GACGCTATTCATTCACTTCTATTCAGATAAATCTATACATTTCAAACTCC
AATGGCTGCTAGGAAGCAAGGTTTATTAGCTCTCTTTGATGTTGACGGAA
CTCTCACGGCTCCGAGAAAGGCGGCAACACCACAAATGTTAGAGTTCATG
CGGGAACTGAGAAAGGTTGTTACAGTTGGAGTCGTCGGTGGATCTGATCT
TTCTAAGATATCAGAGCAGCTTGGGAAGACAGTTATTGATGAATACGATT
ATGTGTTTTCTGAGAATGGTCTTGTGGCTCATAAGGATGGGAAATTAATT
GGCACACAGAGCTTGAAATCATTTCTTGGAGGCGAAAAGCTCAAGGAATT
CATAAATTTTACTCTTCATTACATTGCTGACTTGGACATTCCAATTAAAA
GGGGAACTTTCATTGAATTCCGAAGTGGGATGCTTAATATTTCACCAATT
GGGCGAAACTGCAGCCAAGAAGAAAGGGACGAGTTTGAGAGGTATGACAA
GATTCACAATATACGGCCAAAAATGGTATCTGTGCTTCGGGAGAAGTTTG
CTCACCTTAACTTGACATTTTCAATTGGAGGACAGATAAGCTTTGATGTG
TTTCCCCAGGGATGGGACAAGACATACTGCTTGAGATACCTTGATGACTT
CAATGAATTCACTCTTTTGGGGACAAACTTACAGGGAGGGAATGATCAT
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