FC930861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930861 vs. ExPASy Swiss-Prot
Match: RR30_SPIOL (30S ribosomal protein 1, chloroplastic OS=Spinacia oleracea GN=RPS30 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 5.080e-52 Identity = 97/123 (78.86%), Postives = 114/123 (92.68%), Query Frame = 2 Query: 284 KPLPVRMSWDGPLSSVKLIIQGKNLELTDTVKNHVEEKVGKAVLKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKESDHGRHM 652 KP V MSWDGPLSSVKLI+QG+NLE++D V++HVE+KVGK+V KHSHLVREVDVRLS RGG+ KGP++RRCEVTLFTK+HGV+RAEEDAE++Y+SIDLVSSIIQRKLRKIK+K SDHGRHM Sbjct: 60 KPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGGDLSKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHM 182
BLAST of FC930861 vs. ExPASy Swiss-Prot
Match: LRTA_SYNY3 (Light repressed protein A homolog OS=Synechocystis sp. (strain PCC 6803) GN=lrtA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 329 VKLIIQGKNLELTDTVKNHVEEKVGKAVLKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKESD--HG 643 +KL+IQG N+ +T+ + ++VEEKV +AV +L +VDV LSV + RI + EVT++ V+RA+E +E +YASIDLV+ I R+LRK KE+ D HG Sbjct: 1 MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSV-----ARNARITNKHKAEVTVYA-NGTVIRAQEGSENLYASIDLVADKIARQLRKYKERIQDKQHG 104
BLAST of FC930861 vs. ExPASy Swiss-Prot
Match: LRTA_SYNP2 (Light repressed protein A OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=lrtA PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.935e-12 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 329 VKLIIQGKNLELTDTVKNHVEEKVGKAVLKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKESDHGRHM 652 +KL+IQG N+ +T+++ ++VE K+ KA +VDV LSV + + EVT++ V+RA+E +E +YASIDLVS I R+LRK KEK H+ Sbjct: 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANN--ARITDKHKAEVTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHV 105 The following BLAST results are available for this feature:
BLAST of FC930861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930861 ID=FC930861; Name=FC930861; organism=Citrus clementina; type=EST; length=652bpback to top |