FC930862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 2.999e-106 Identity = 126/143 (88.11%), Postives = 136/143 (95.10%), Query Frame = 1 Query: 46 EAYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPK 474 EAYDALDP GNIT+KWD+MSWTPDGYVAVVT+FNFQ+YRHIQ+PGWTLGW WAKKEVIWSM+G QTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQI NCCKGGV++SW QDP TA SSFQ+SVGAAGTTNKTVRVP+ Sbjct: 35 EAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPR 177 HSP 2 Score: 120.168 bits (300), Expect = 2.999e-106 Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNMKT 674 FTL PGPGYTCGPAK+ +PTKF+T+D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSF +T Sbjct: 179 FTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNET 244
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 4.696e-104 Identity = 119/151 (78.81%), Postives = 136/151 (90.07%), Query Frame = 1 Query: 46 EAYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKISHLKPQG 498 EAYD LDP+GNIT+KWDI++WT DGYVA VT++NFQQYRHIQAPGWTLGW+WAK+EVIW M GGQTTEQGDCSK+KG IPHCCKK P+VVDLLPG+PYNQQI NCC+GGV++SWAQDP TA+S+FQL+VG AGTTNKTVRVPK LK G Sbjct: 32 EAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPG 182 HSP 2 Score: 127.487 bits (319), Expect = 4.696e-104 Identity = 59/87 (67.82%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNMKTQ*AAQRVLVAVKTWNRSGECI 737 FTLKAPGPGYTC PAK+ KPT+FI +DKRRVTQA+MTWNVTCTYSQFLAQKTPTCCVSLSSF KT + + ++ G C+ Sbjct: 176 FTLKAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNTSQPGNCV 262
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 1.033e-101 Identity = 116/151 (76.82%), Postives = 133/151 (88.08%), Query Frame = 1 Query: 46 EAYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKISHLKPQG 498 EAYD LDPNGNITIKWD++ WTPDGYVAVV+++N+QQYRHIQ+PGW LGW WAKKE+IW+M GGQ TEQGDCSK+K NIPHCCKKDP +VDLLPGTPYN QI NCCKGGV++SWAQDP A++SFQ+SVG AGTTNKTVRVP+ LK G Sbjct: 27 EAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFKSNIPHCCKKDPEIVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLKSPG 177 HSP 2 Score: 108.612 bits (270), Expect = 1.033e-101 Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSF 662 FTLK+PGPGYTCG AKV +PTKF + D RR TQA MTWNVTCTYSQ +AQ++PTCCVSLSSF Sbjct: 171 FTLKSPGPGYTCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSF 232 HSP 3 Score: 33.8834 bits (76), Expect = 1.033e-101 Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 2 Query: 644 CFSLFLQHENT-VSCPTCACGCQN 712 C SL + +T V+CPTC+CGCQN Sbjct: 226 CVSLSSFYNDTIVNCPTCSCGCQN 249
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 1.788e-100 Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 1 Query: 46 EAYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKISHLKPQG 498 EAYDALDPNGNITIKWD+MSWTPDGYVAVVT+FN+QQ+RHIQAPGW LGWTWAKKEVIWSM+G QTTEQGDCSK+KG PHCCKKDPTVVDLLPGTPYN QI NCCK GVI+++ QDP+ A SSFQ+SVG AGTTNKTV++PK LK G Sbjct: 35 EAYDALDPNGNITIKWDVMSWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGGTPHCCKKDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKTVKLPKNFTLKAPG 185 HSP 2 Score: 114.39 bits (285), Expect = 1.788e-100 Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSF 662 FTLKAPGPGYTCG A + +PTKF T D RR TQA+MTWNVTCTYSQFLAQKTP+CCVSLSSF Sbjct: 179 FTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSF 240
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 5.386e-97 Identity = 114/142 (80.28%), Postives = 125/142 (88.03%), Query Frame = 1 Query: 49 AYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPK 474 AYD LDP+GNITIKWDIMSWT DGYVA VT+ NFQ YRHIQ PGWTLGWTWAKKEVIWSM+G QTTEQGDCSK+KGN+PHCCKK PTVVDLLPG PYNQQ NCCKGGVI +W QDP+ A+S FQ+S G AGTTNKTV++PK Sbjct: 20 AYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPK 161 HSP 2 Score: 106.301 bits (264), Expect = 5.386e-97 Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSF 662 FTL PGPGYTCGPAK+ T F+T+DKRR TQA+MTWNVTCTYSQFLA+K P+CCVS SSF Sbjct: 163 FTLLGPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSF 224 HSP 3 Score: 30.4166 bits (67), Expect = 5.386e-97 Identity = 11/24 (45.83%), Postives = 17/24 (70.83%), Query Frame = 2 Query: 644 CFSLFLQHENTVS-CPTCACGCQN 712 C S + +T++ CP+CACGC+N Sbjct: 218 CVSFSSFYNDTITPCPSCACGCEN 241
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.660e-92 Identity = 112/151 (74.17%), Postives = 128/151 (84.77%), Query Frame = 1 Query: 46 EAYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKISHLKPQG 498 EAYD LDPNGNITIKWDI WTPDGYVAVVTI+NFQ+YRHIQAPGW+LGW WAKKE+IWSM GGQ TEQGDCS +K NIPHCCK+DP VVDL+PG PYN Q NCCKGGV++SW QDP A++SFQ++VG +GT+NKTV+ PK LK G Sbjct: 28 EAYDPLDPNGNITIKWDITQWTPDGYVAVVTIYNFQKYRHIQAPGWSLGWAWAKKEIIWSMAGGQATEQGDCSAFKANIPHCCKRDPRVVDLVPGAPYNMQFGNCCKGGVLTSWVQDPLNAVASFQITVGHSGTSNKTVKAPKNFTLKAPG 178 HSP 2 Score: 101.293 bits (251), Expect = 1.660e-92 Identity = 48/67 (71.64%), Postives = 56/67 (83.58%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAK-VGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNMKT 674 FTLKAPGPGY+CG A+ V PT+FI+ D RR TQA +TWNVTCTYSQF+AQ+ PTCCVSLSSF +T Sbjct: 172 FTLKAPGPGYSCGLAQEVKPPTRFISLDGRRTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNET 238
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.653e-86 Identity = 100/142 (70.42%), Postives = 124/142 (87.32%), Query Frame = 1 Query: 49 AYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPK 474 AYD LDPNGNITIKWD+MSWTPDGYVA+VTI N+Q YR I APGWT+GWTWA++EVIWSM+G Q T+QGDCS++K N+PHCC++ P VVDLLPG PYNQQI NCC+GGV+ ++ Q P+ A ++FQ+SVG AGTTN+TVR+P+ Sbjct: 21 AYDPLDPNGNITIKWDVMSWTPDGYVAMVTINNYQTYRQIMAPGWTVGWTWARQEVIWSMVGAQATDQGDCSRFKANLPHCCRRTPAVVDLLPGVPYNQQIANCCRGGVLPAYGQAPSAAAAAFQVSVGQAGTTNRTVRLPR 162 HSP 2 Score: 97.8265 bits (242), Expect = 2.653e-86 Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSF 662 FTL PGPGYTCG A+V T F+T+D+RR TQA+MTWNVTCTYSQ LA K P+CCVS SSF Sbjct: 164 FTLLGPGPGYTCGRARVVPSTVFLTADRRRKTQALMTWNVTCTYSQHLASKYPSCCVSFSSF 225 HSP 3 Score: 23.8682 bits (50), Expect = 2.653e-86 Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 2 Query: 647 FSLFLQHENTVSCPTCACGC 706 FS F ++ V C CACGC Sbjct: 222 FSSFY-NDTIVPCAKCACGC 240
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.400e-84 Identity = 101/141 (71.63%), Postives = 122/141 (86.52%), Query Frame = 1 Query: 49 AYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVP 471 AYD LDP GNITIKWD++SWTPDGYVA+VT+ N+Q YR I APGWT+GW+WAKKEVIWS++G Q TEQGDCSK+KG IPH CK+ P +VDLLPG PYNQQI NCCK GV+S++ QDP ++S+FQ+SVG AGTTNKTV++P Sbjct: 22 AYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLP 162 HSP 2 Score: 95.5153 bits (236), Expect = 3.400e-84 Identity = 43/66 (65.15%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNMKT 674 FTL PGPGYTCGPA + T ++T D+RR TQA+MTW VTCTYSQ LA + PTCCVS SSF T Sbjct: 165 FTLAGPGPGYTCGPATIVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNST 230
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSI (COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.400e-84 Identity = 101/141 (71.63%), Postives = 122/141 (86.52%), Query Frame = 1 Query: 49 AYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVP 471 AYD LDP GNITIKWD++SWTPDGYVA+VT+ N+Q YR I APGWT+GW+WAKKEVIWS++G Q TEQGDCSK+KG IPH CK+ P +VDLLPG PYNQQI NCCK GV+S++ QDP ++S+FQ+SVG AGTTNKTV++P Sbjct: 22 AYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLP 162 HSP 2 Score: 95.5153 bits (236), Expect = 3.400e-84 Identity = 43/66 (65.15%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNMKT 674 FTL PGPGYTCGPA + T ++T D+RR TQA+MTW VTCTYSQ LA + PTCCVS SSF T Sbjct: 165 FTLAGPGPGYTCGPATIVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNST 230
BLAST of FC930862 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 2.188e-80 Identity = 99/152 (65.13%), Postives = 117/152 (76.97%), Query Frame = 1 Query: 49 AYDALDPNGNITIKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYK--GNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKISHLKPQG 498 AYD+LDPNGNITIKWD+M WTPDGY AVVT+ N+QQ+RHIQ PGW LGWTW +KEVIWSM G Q EQGDCS K N+PH CKK PTVVDLLPG P + QI NCCK G +S+++QDP + +SFQ+ VG +G +N+TVRVPK L G Sbjct: 27 AYDSLDPNGNITIKWDVMQWTPDGYAAVVTLSNYQQFRHIQPPGWQLGWTWQQKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPKNFSLMAPG 178 HSP 2 Score: 100.523 bits (249), Expect = 2.188e-80 Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 477 FTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSF-NMKTQ*AAQRVLVAVKTWNRSGECIK 740 F+L APGPGYTC A + KP++F++ D RR TQ +MTWNV CTYSQFLAQK P+CCVSLSSF N KT + +G+C+K Sbjct: 172 FSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVK 260 The following BLAST results are available for this feature:
BLAST of FC930862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930862 ID=FC930862; Name=FC930862; organism=Citrus clementina; type=EST; length=753bpback to top |