FC930869

Overview
NameFC930869
Unique NameFC930869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930869 vs. ExPASy Swiss-Prot
Match: BP73_ORYSJ (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica GN=BP-73 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 3 
Query:  426 NGPILSLSNSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKR 662
            NGP +SL+++ + QATS PG REKEIVELF++VQ QLR R   +E+KK E  + Q  E  +VDSLL LLRKHSV+Q ++
Sbjct:   93 NGPPISLTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGSVDSLLNLLRKHSVDQRRK 170
The following BLAST results are available for this feature:
BLAST of FC930869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BP73_ORYSJ2.361e-1656.96SAP-like protein BP-73 OS=Oryza sativa subsp. japo... [more]
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Properties
Property NameValue
Genbank descriptionC34109H08EF PostHarvP1 Citrus clementina cDNA clone C34109H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930869 ID=FC930869; Name=FC930869; organism=Citrus clementina; type=EST; length=716bp
GGTTGCTATCAAAACTGAAAGAACCAAATTTGAAAAATCATATAAAATGC
AAAAGCTGCTCTAATCTTGTGTCCAATTTCGAGCAAGTGAAAGTGATGTC
GCAAGCAGTCCATCTCACAGCTAAGAGCCCCCCAGGTTATGGGCCATCTG
AAGGCAGACGTCTCCCATGTATGGGTGTTTCCGGAAGAGCAGTGGCTGTG
TCTTCATGCTCTTCTCGTGGTGACTTCAGAATCCTATCCCAGGTCAAGAT
TGGAGCAGTGAAATACAGTTCTAAGGGAGCATCATTTGCATGTAGAGCTA
GCTCTGGTAGTTATAGGAGAAATCCTGACTTCTCAAGGCAAAACAGAAAT
GGTTACCGAGGCAGGAACAGGGAAAATGAAGAGAGGGATAGCATTGATGA
TGAATCTGAACTGTTATCTTCCAGAAATGGGCCTATACTCTCCCTCTCCA
ATTCCCCAAAATTCCAAGCAACATCAACCCCAGGACCAAGAGAGAAGGAG
ATCGTTGAACTTTTCCGCAAGGTCCAAGTTCAGCTTCGAGAAAGAGCTGC
AGCAAGAGAAGACAAGAAGACTGAATCCATGCAAGGACAACGTAAAGAGA
GTGAAACTGTTGATTCTCTCCTTAAGCTGTTGAGGAAACACTCAGTTGAG
CAAGGTAAAAGGAAAAGCAGCAGTGGCAGCAGCAACGATTTTAGTTTNGG
AGCAGATGAACCAATG
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