FC930875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 5.349e-90 Identity = 163/198 (82.32%), Postives = 183/198 (92.42%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MPI RIAIGTPGEAS PDA++AA AEFFSM+IFVFAGQGSGMA+ KLT G +TPAGL++ASL+HAFALFVAVSVGAN+SGGHVNPAVTFGAF+GG+ITLLR+ILYWIAQLLG+VVACLLLK STGG+ET+AF+LS GV+ WNAVVFEIVMTFGLVYTVYATAVDPKKG++G IAP+ IG IVGANIL GG FDGASM Sbjct: 1 MPINRIAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASM 198
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 5.914e-89 Identity = 160/198 (80.81%), Postives = 180/198 (90.91%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MP+ RIA+G PGE SHPD KAA+AEF SMLIFVFAG GSGMAFSKLTDGG +TP+GLI+ASLAHA ALFVAV+VGANISGGHVNPAVTFGAFVGG+I+L+++++YW+AQLLGSVVACLLLK +TGG AF+LS+GV +WNAVVFEIVMTFGLVYTVYATAVDPKKG+LG IAPI IGFIVGANILAGG FDGASM Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASM 198
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 4.238e-87 Identity = 160/198 (80.81%), Postives = 178/198 (89.90%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MP+ RIA+G PGE SHPD KAA+AEF S LIFVFAG GSGMAFSKLTDGGA+TPAGLI+ASLAHA ALFVAVSVGANISGGHVNPAVTFGAFVGG+I+LL++++YW+AQLLGSVVACLLLK +TGG AF+LS+GV + NAVV E+VMTFGLVYTVYATAVDPKKG+LG IAPI IGFIVGANILAGG FDGASM Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASM 198
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 8.838e-85 Identity = 161/198 (81.31%), Postives = 173/198 (87.37%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MPI IA+G+ E HP ALKAALAEF S LIFVFAGQGSGMAFSKLT GGA+TPAGLI+A++AHAFALFVAVSVGANISGGHVNPAVTFGAFVGG+ITL R +LYWIAQLLGS VAC LL+FSTGGL T F L +GVS W A+V EIVMTFGLVYTVYATAVDPKKG+LGTIAPI IGFIVGANIL GG FDGASM Sbjct: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFGL-TGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASM 197
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 1.154e-84 Identity = 158/198 (79.80%), Postives = 174/198 (87.88%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MPI IAIG P EA+ PDALKAALAEF S LIFV AG GSGMAF+KLT+ GA+TP+GL++A++AHAF LFVAVSVGANISGGHVNPAVTFGAF+GG+ITLLR ILYWIAQLLGSVVACL+LKF+TGGL AF LS+GV NA VFEIVMTFGLVYTVYATA+DPK G+LGTIAPI IGFIVGANILAGG F GASM Sbjct: 1 MPIRNIAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASM 198
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.177e-83 Identity = 158/198 (79.80%), Postives = 171/198 (86.36%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MPI RIA+G+ E HP ALKAA AEF S LIFVFAGQGSGMAFSKLT GG +TPAGLI+A++AHAFALFVAVSVGANISGGHVNPAVTFGAFVGG+ITL R +LYW+AQLLGS VAC LL+FSTGG T F L +GVS W A+V EIVMTFGLVYTVYATAVDPKKG+LGTIAPI IGFIVGANIL GG FDGASM Sbjct: 1 MPINRIALGSHQEVYHPGALKAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFGL-TGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASM 197
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 295.049 bits (754), Expect = 2.491e-79 Identity = 152/199 (76.38%), Postives = 168/199 (84.42%), Query Frame = 2 Query: 107 MPIYRIAIG-TPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MP IAIG E HP+AL+AALAEF S LIFVFAG GSG+AF+K+TD GA+TP+GL++A+LAHAF LFVAVSVGANISGGHVNPAVTFG +GG+ITLLR ILYWIAQLLGSV AC LL F+TGG AF LS+GV S NA+VFEIVMTFGLVYTVYATAVDPK G+LGTIAPI IGFIVGANILAGG F GASM Sbjct: 1 MPTRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASM 199
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.157e-76 Identity = 151/198 (76.26%), Postives = 164/198 (82.83%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MPI IA+GTP EA+HPD LKA LAEF S IFVFAG GSG+A++KLT+ GA+TPAGLISAS+AHAFALFVAVSVGANISGGHVNPAVTFGAFVGG+ITLLR I+Y IAQLLGS+VA LL F T AF LS GV A+V EIVMTFGLVYTVYATAVDPKKGN+G IAPI IGFIVGANIL GG F GASM Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASM 197
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 278.1 bits (710), Expect = 3.151e-74 Identity = 149/198 (75.25%), Postives = 162/198 (81.82%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 MPI IA+GTP EA+HPD LKA LAEF S IFVFAG GSG+A++KLT+ GA+TPAGLISAS+AHAFALFVAVSVGANISGGHVNPAV FGAFVGG+ITLLR I+Y IAQLLGS+V LL F T AF LS GV A+V EIVMTFGLVYTVYATAVDPKKGN+G IAPI IGFIVGANIL GG F GASM Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASM 196
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.280e-63 Identity = 120/194 (61.86%), Postives = 147/194 (75.77%), Query Frame = 2 Query: 119 RIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 ++A G+ G++ ++KA +AEF + L+FVFAG GS +AF +LT+GGA PAGL++ ++AHA ALFV VSV AN SGGH+NPAVTFG VGGHIT+L + YW+AQLLG+ VACLLL+F T G +S G + VVFEIV+TF LVYTVYATA DPKKG+LGTIAPI IGFIVGANILA G F G SM Sbjct: 3 KLAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSM 196 The following BLAST results are available for this feature:
BLAST of FC930875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930875 ID=FC930875; Name=FC930875; organism=Citrus clementina; type=EST; length=700bpback to top |