FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:13..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 396.356 bits (1017), Expect = 7.938e-110
Identity = 188/233 (80.69%), Postives = 219/233 (93.99%), Query Frame = 1
Query:    4 ATLKEMRDGYAEV-VDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +TLKEMRDG + + +DPKS V GGV+DVYGED ATEDQ VTPW++SVASGY+LLRDPHHNKGLAF+EKER++HYLRGLLPPT ISQ+LQ KK+++ IRQYQ+PLQKY AMM+L+ERN++LFYKLLIDNVEELLP+VYTPTVGEACQKYGSI+ RPQG++ISLK+KGKVL+VL+NWP+K+IQVIVVTDGERILGLGDLGC G+GIPVGKLSLYTALGG+RPSACLP TIDVGTN
Sbjct:    3 STLKEMRDGASVLDMDPKSTVGGGVEDVYGEDRATEDQLVTPWTISVASGYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQLPLQKYTAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKVLDVLKNWPQKSIQVIVVTDGERILGLGDLGCQGIGIPVGKLSLYTALGGVRPSACLPVTIDVGTN 235          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.704e-108
Identity = 186/233 (79.83%), Postives = 217/233 (93.13%), Query Frame = 1
Query:    4 ATLKEMRDGYAEV-VDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +TLK++RDG + + +DPK+ V GGV+D+YGED ATEDQ VTPW+VSVASGYSLLRDP HNKGLAF++KER++HYL GLLPP V +QELQ +K++++IRQYQVPLQKYMAMMDLQERN++LFYKLLIDNVEELLP+VYTPTVGEACQKYGSI+ RPQG++ISLK+KGK+LEVL+NWPE+ IQVIVVTDGERILGLGDLGC GMGIPVGKLSLYTALGG+RPSACLP TIDVGTN
Sbjct:    3 STLKDIRDGASVLDLDPKATVGGGVEDLYGEDFATEDQLVTPWTVSVASGYSLLRDPRHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERRIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTN 235          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.073e-106
Identity = 181/222 (81.53%), Postives = 206/222 (92.79%), Query Frame = 1
Query:   34 AEVVDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +E   P + V GGV+DVYGED+ATED  +TPWSVSVASGYSLLRDPHHNKGLAF+EKER++HYLRGLLPP V++ +LQVKKM+HNIRQY+VPLQ+Y AMMDLQERN++LFYKLLI+N+EELLPIVYTPTVGEACQKYG+I+  PQG++ISLKDKGKVLE+L+NWP+K IQVIVVTDGERILGLGDLGC GMGIPVGKLSLYTALGGIRPSACLP TIDVGTN
Sbjct:   70 SESKKPTAVVGGGVEDVYGEDSATEDHFITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYEVPLQRYQAMMDLQERNERLFYKLLIENIEELLPIVYTPTVGEACQKYGTIFKNPQGLYISLKDKGKVLEILKNWPQKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTN 291          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 3.451e-105
Identity = 177/217 (81.57%), Postives = 202/217 (93.09%), Query Frame = 1
Query:   49 PKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            P + V GGV+D+YGEDTATED  +TPWSVSVASGYSLLRDPHHNKGLAF+EKER++H+LRGLLPP V++ +LQVKKM+HNIRQYQVPLQ+Y AMMDLQ+RN++LFYKLLI+NVEELLPIVYTPTVGEACQKYGSI+   QG+FISLKDKG++LE+L+NWP K IQVIVVTDGERILGLGDLGC GMGIPVGKL+LYTALGG+RPSACLP TIDVGTN
Sbjct:   75 PFAAVGGGVEDMYGEDTATEDHYITPWSVSVASGYSLLRDPHHNKGLAFTEKERDAHFLRGLLPPVVVNHDLQVKKMMHNIRQYQVPLQRYQAMMDLQQRNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSIFENSQGLFISLKDKGRILEILKNWPHKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTN 291          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 372.089 bits (954), Expect = 1.603e-102
Identity = 176/215 (81.86%), Postives = 199/215 (92.56%), Query Frame = 1
Query:   55 SGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +   GGV     ED ATE+ PVTPW+ SVASGY+LLRDPHHNKGLAFSEKER++HYLRGLLPP V+SQ+LQVKK++HN+RQY VPLQ+YMAMMDLQERN++LFYKLLIDNVEELLP+VYTPTVGEACQKYGSI+ +PQG+++SLKDKGKVL+VLRNWPE+NIQVIVVTDGERILGLGDLGC GMGIPVGKLSLYTALGG+RPSACLP TIDVGTN
Sbjct:   74 AAAGGGV-----EDMATEEVPVTPWAFSVASGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTN 283          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.956e-102
Identity = 175/221 (79.19%), Postives = 200/221 (90.50%), Query Frame = 1
Query:   37 EVVDPKSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            E+ +   G++GGV DVYGE+ AT+DQ VTPWS SVA G+SLLRDP HNKGLAF+EKER++H+LRGLLPP V+SQELQ KK L  +RQYQVPLQKYMAMMDLQERN+KLFYKLL+D+VEELLP+VYTPTVGE CQKYGSI+ RPQG+FISLKDKG++LE+LRNWPEK IQVIVVTDGERILGLGDLGC GMGIPVGKLSLY+ALGG+ PSACLP T+DVGTN
Sbjct:    9 EMTNGSDGITGGVADVYGEEFATQDQLVTPWSFSVACGHSLLRDPQHNKGLAFTEKERDAHFLRGLLPPVVLSQELQEKKFLTTLRQYQVPLQKYMAMMDLQERNEKLFYKLLVDHVEELLPLVYTPTVGEGCQKYGSIFRRPQGLFISLKDKGRILELLRNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVCPSACLPITLDVGTN 229          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.357e-101
Identity = 175/214 (81.78%), Postives = 201/214 (93.93%), Query Frame = 1
Query:   52 KSGVSGGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVG 693
            +S V+GGVQDVYGED+ATEDQ +TPW++SVASG+SLLR+PH+NKGLAFSE+ER++HYLRGLLPP VIS +LQVKKM+++IR+Y VPLQ+YMAMMDLQE N++LFYKLLIDNVEELLPIVYTPTVGEACQKYG I+ RPQG+F SLK+KGK+ EVL+NWPEK IQVIVVTDGERILGLGDLGC GMGIPVGKLSLY+ALGGIRPSACLP TIDVG
Sbjct:    4 ESTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGWIFKRPQGLFFSLKEKGKIHEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGIRPSACLPVTIDVG 217          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 9.726e-100
Identity = 168/211 (79.62%), Postives = 198/211 (93.84%), Query Frame = 1
Query:   67 GGVQDVYGEDTATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            GGV+D+YGED+ATED  +TPW+ SVASG SLLRDP +NKGLAF+E ER++HYLRGLLPP+V +QELQ K+++HN+RQY+VPL +YMA+MDLQERN++LFYKLLIDNV ELLP+VYTPTVGEACQKYGSI+ RPQG++ISLK+KGK+LEVL+NWPEK+IQVIVVTDGERILGLGDLGC GMGIPVGKLSLYTALGG+RPS+CLP TIDVGTN
Sbjct:   23 GGVRDLYGEDSATEDHLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPSVFNQELQEKRLMHNLRQYEVPLHRYMALMDLQERNERLFYKLLIDNVAELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPVTIDVGTN 233          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.504e-92
Identity = 157/200 (78.50%), Postives = 182/200 (91.00%), Query Frame = 1
Query:  100 ATEDQPVTPWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            A+E+ PV PW+ SVASGY+LLRDPHHNKGLAF+E+ER+ HYLRGLLPP V+SQELQ+KK ++ +RQYQ PLQ+Y+AMM+LQE +++LFYKLLIDNV ELLP VYTPTVGEACQKYGSI+ RPQG+++SLKDKGKVLEVLRNWP +NIQVI VTDGERILGLGDLGC GMGIPVGKL+LYTALGG+ PS CLP TIDVGTN
Sbjct:   81 ASEELPVMPWATSVASGYTLLRDPHHNKGLAFTEEERDGHYLRGLLPPAVLSQELQIKKFMNTLRQYQTPLQRYIAMMNLQETDERLFYKLLIDNVVELLPFVYTPTVGEACQKYGSIFGRPQGLYVSLKDKGKVLEVLRNWPHRNIQVICVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSVCLPITIDVGTN 280          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.814e-61
Identity = 108/183 (59.02%), Postives = 139/183 (75.96%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGT 696
            GY L RDPH NK LAF+ +ER    + GLLPP +ISQELQV +++ N  +      +Y+ +MDLQ+RN+KLFY +L+ +VE+ +PIVYTPTVG ACQ+Y   + +P+G+FIS+ DKG +  VL  WPE  ++ IVVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG+ P  CLP T+DVGT
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGT 197          
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_POPTR7.938e-11080.69NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_VITVI9.704e-10879.83NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR1.073e-10681.53NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_FLATR3.451e-10581.57NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_ORYSJ1.603e-10281.86NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_MESCR7.956e-10279.19NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_SOLLC1.357e-10181.78NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_PHAVU9.726e-10079.62NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_MAIZE1.504e-9278.50NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MOUSE6.814e-6159.02NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]

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Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
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