FC930920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 1.845e-70 Identity = 120/166 (72.29%), Postives = 132/166 (79.52%), Query Frame = 1 Query: 124 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKG 621 G GW +AHATFY YGNLYS+GYGTNTAALSTALFNNG+SCGACFEI+C ND +WC PGSI VTATNFC GGWCNPPQQHFDLSQPVF++IAQY+AGIVPV+YRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV + +KG Sbjct: 24 GGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKG 189 HSP 2 Score: 25.7942 bits (55), Expect = 1.845e-70 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 615 QGSRTDWQPMSRN 653 +GSRT WQ MSRN Sbjct: 188 KGSRTGWQAMSRN 200
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.544e-69 Identity = 118/167 (70.66%), Postives = 131/167 (78.44%), Query Frame = 1 Query: 121 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKG 621 Y GW +AHATFY YGNLYS+GYGTNTAALSTALFNNG+SCGACFEIKC +D WC PG+I VTATNFC GGWCNPP HFDLSQPVF++IAQYKAG+VPVSYRRVPC R+GGIRFTINGHSYFNLVL+TNVGGAGDV +V++KG Sbjct: 26 YDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKG 192 HSP 2 Score: 25.409 bits (54), Expect = 1.544e-69 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 615 QGSRTDWQPMSRN 653 +GSRT WQ MSRN Sbjct: 191 KGSRTRWQQMSRN 203
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.544e-69 Identity = 118/171 (69.01%), Postives = 134/171 (78.36%), Query Frame = 1 Query: 121 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGQELI 633 YG GW +AHATFY YGNLYS+GYGT+TAALSTALFNNG+SCG+CFEI+C ND +WC PGSI VTATNFC GGWCNPP +HFDL+QPVF++IAQY+AGIVPVSYRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV + +IKG + Sbjct: 22 YGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTV 192 HSP 2 Score: 25.0238 bits (53), Expect = 1.544e-69 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 615 QGSRTDWQPMSRN 653 +GSRT WQ MSRN Sbjct: 187 KGSRTVWQAMSRN 199
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 3.713e-65 Identity = 115/167 (68.86%), Postives = 126/167 (75.45%), Query Frame = 1 Query: 121 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKG 621 Y GW +A ATFY YGNLYS+GYGTNTAALSTALFN G SCGACF+IKCV+DP+WC G+I VT TNFC GGWCNPPQ HFDL+QP+F +IAQYKAG+VPV YRRV C RKGGIRFTINGHSYFNLVLITNV GAGDV +VSIKG Sbjct: 25 YSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKG 191 HSP 2 Score: 22.3274 bits (46), Expect = 3.713e-65 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 615 QGSRTDWQPMSRN 653 +G+ T WQ MSRN Sbjct: 190 KGTNTRWQSMSRN 202
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.400e-64 Identity = 113/168 (67.26%), Postives = 127/168 (75.60%), Query Frame = 1 Query: 124 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKG 621 G W +AHATFY YGNLYS+GYGTNTAALSTALFNNGMSCGACFE+KC NDP+WC GS I +TATNFC GGWCNPP++HFDL+ PVF +IAQY+AGIVPVSYRRVPC ++GGIRFTINGH YFNLVLITNV GAGD+ S+KG Sbjct: 28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKG 195 HSP 2 Score: 22.7126 bits (47), Expect = 1.400e-64 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 615 QGSRTDWQPMSRN 653 +GSRT W +SRN Sbjct: 194 KGSRTGWMSLSRN 206
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.537e-64 Identity = 113/166 (68.07%), Postives = 127/166 (76.51%), Query Frame = 1 Query: 130 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGQE 627 GW HATFY YGNLY +GYGTNTAALSTALFNNG++CGAC+E+KC +DPRWC +I VTATNFC GGWCNPP QHFDL++P F QIAQY+AGIVPVS+RRVPC +KGGIRFTINGHSYFNLVLI+NVGGAGDV AVSIKG + Sbjct: 29 GWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSK 194
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.301e-63 Identity = 111/170 (65.29%), Postives = 126/170 (74.12%), Query Frame = 1 Query: 124 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGQE 627 G W AHATFY YGNLYS+GYGTNTAALST+LFN+G SCGACFEIKCVNDP+WC PG S+FVTATNFC GGWCNPP+ HFDL+ PVF +IA+Y+AGIVP+SYRRV C + GGIRFTINGH YFNLVLITNV GAGD+ S+KG + Sbjct: 31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSK 200
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 7.501e-63 Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = 1 Query: 121 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKG 621 YG GW AHATFY YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N C PGSI VTATNFC GGWCNPP+ HFD+++P F IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKG Sbjct: 21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKG 186 HSP 2 Score: 28.8758 bits (63), Expect = 7.501e-63 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 615 QGSRTDWQPMSRN 653 +GSRT WQPMSRN Sbjct: 185 KGSRTGWQPMSRN 197
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 7.501e-63 Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = 1 Query: 121 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKG 621 YG GW AHATFY YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N C PGSI VTATNFC GGWCNPP+ HFD+++P F IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKG Sbjct: 21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKG 186 HSP 2 Score: 28.8758 bits (63), Expect = 7.501e-63 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 615 QGSRTDWQPMSRN 653 +GSRT WQPMSRN Sbjct: 185 KGSRTGWQPMSRN 197
BLAST of FC930920 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 8.434e-63 Identity = 110/168 (65.48%), Postives = 126/168 (75.00%), Query Frame = 1 Query: 124 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKG 621 G W +AHATFY YGNLYS+GYG NTAALSTALFNNG+SCG+CFE+KC+NDP WC PG SI +TATNFC GGWCNPP++HFDL+ P+F IA+YKAGIVPVSYRR+PC +KGGIRFTING YFNLVL+TNV GAGDV VS+KG Sbjct: 29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKG 196 The following BLAST results are available for this feature:
BLAST of FC930920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930920 ID=FC930920; Name=FC930920; organism=Citrus clementina; type=EST; length=654bpback to top |