FC930921

Overview
NameFC930921
Unique NameFC930921
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15324 contig Ccv1_Contig15324:12..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.931e-35
Identity = 82/211 (38.86%), Postives = 128/211 (60.66%), Query Frame = 3
Query:   93 IDDVQELRKVEP-STIPERFVR---DLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFG--VCCAAVRMNYY 707
            +  VQE+ K +  +T+P R+VR   D TE        +     IPII++ +L         +E+  L  AC+EWGFFQ+++HGI+ + L+ ++   +DFF LP+EEKKK+   P  ++G+GQAFV SE+QKLDW ++F   V+P  +R P L+P  P  F +TLE YS +V+ + + L+  +A +L +K E  E++F       ++RMNYY
Sbjct:   14 VPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIE----IPIIDMKRLCSST--TMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYY 218          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 74/187 (39.57%), Postives = 112/187 (59.89%), Query Frame = 3
Query:   93 IDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAE 653
            +++VQ L   E   +P R+VR   E    +    S    IP+I+LS+L+   +    +E+    +AC +WGFFQ+I+HG+   ++E ++   +DFF LP +EK  Y  LP  ++GYGQAFV SE QKLDW +M  L  +P   RN + WP  P  F ET+E YS +++K+  CL   +A +LGL++E
Sbjct:   14 VENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSLE--IPVIDLSRLLDQQYA--CDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESE 196          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20
Identity = 59/195 (30.26%), Postives = 96/195 (49.23%), Query Frame = 3
Query:  123 EPSTIPERFVRDLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            +  T+  +FVRD  ERP       S    IP+I+L+ +   + D+       +  ACE+WG FQV+DHGI+++L+  + ++A+ FF LP EEK ++ M  G   G+  +         DW  +      P   R+   WP KP  +    E YS ++  L   LL+ ++ ++GL+ E   +        V +NYY
Sbjct:   11 QEKTLNSKFVRDEDERPKIAYNKFSDE--IPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYY 203          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 64/199 (32.16%), Postives = 98/199 (49.25%), Query Frame = 3
Query:  111 LRKVEPSTIPERFVRDLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            L+  E S    +FVRD  ERP       S    IP+I+L+ +      E  +EI+    ACE+WG FQV+DHG++  LL ++  +A+DFF LP +EK ++ M  G   G+  +         DW  +      P   R+   WP KP E+    E YS+ +  L   LL+ ++ ++GL+ E   +        V +NYY
Sbjct:    7 LKWEEHSLHENKFVRDEDERPKVPYNTFS--NEIPVISLAGIDGCRRAEICDEIVK---ACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYY 200          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19
Identity = 62/221 (28.05%), Postives = 108/221 (48.87%), Query Frame = 3
Query:   84 VGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPGG-----IPIINLSKLMKGNHD---EFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYP--MLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVC---CAAVRMNYY 707
            +G    V+EL +    TIP+ +VR   E  S +   L+         +P I+L ++   + +   + H E+   AT   +WG   +I+HGI   L++ ++   K+FF LP+EEK+ Y      G VQGYG     + + +L+W + F   V P    +  +WP KP ++      Y++ +R L   +L  ++I LGL+    E+  G        +++N+Y
Sbjct:    6 MGPSPRVEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAAT---DWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFY 223          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19
Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 3
Query:  129 STIPERFVRDLTERPSSLATALSPPGGIPIINLSKL--MKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            S +  +FVRD  ERP       S    IP+I+L+ +  + G   E   EI+    ACE WG FQV+DHG++ +L+ ++ ++A+DFF LP EEK ++ M  G   G+  +         DW  +      P   R+   WP KP  +++  E YS  +  L   LL+ ++ ++GL+ E+           + +NYY
Sbjct:   12 SKLNSKFVRDEDERPKVAYNEFSDE--IPVISLAGIDDVDGKRGEICREIVE---ACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYY 201          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19
Identity = 59/214 (27.57%), Postives = 105/214 (49.07%), Query Frame = 3
Query:   93 IDDVQELRKVEPSTIPERFVRDLTERPSS----LATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKY--PMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFG---VCCAAVRMNYY 707
            ++ V+ L K    +IP+ ++R   E  S     L         +P I+L  +   +     N I  L  A  +WG   +I+HGI  +L+E ++K  ++FF L +EEK+KY      G +QGYG     + + +L+W + F     P   R+  +WP  P+++ E    Y++ +R L   + K +++ LGL+ +  E+  G        +++NYY
Sbjct:    4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYY 217          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19
Identity = 60/215 (27.91%), Postives = 109/215 (50.70%), Query Frame = 3
Query:   78 VKVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFF-MLPLEEKKKYPMLPG--TVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGV--CCAAVRMNYY 707
            ++V ++  +  + K    TIP  ++R   E+P++  T       +P+I++S +     D+    +  +  A +EWG FQVI+HGI   ++EN++KV K+FF  +P EEK+     PG  +++GYG +       K  W +     + P    N + WP  P  + E  E Y++ +RK+   + + +++ LGL+     E  G       +++NYY
Sbjct:   15 MEVARVQAISSITKCM-DTIPSEYIRSENEQPAA-TTLQGVVLEVPVIDISNV----DDDEEKLVKEIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYY 223          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19
Identity = 64/212 (30.19%), Postives = 103/212 (48.58%), Query Frame = 3
Query:   90 QIDDVQELRKVEPST--IPERFVRDLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKY--PMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCA--AVRMNYY 707
            +++ VQ++      T  IP  F+R   E+P+ + T   P   IP+++LS     + +     ++    A EEWG FQV++HGI   L+  ++ V + FF LP  EK+    P     ++GYG         K  W +     + P    N + WP  P E+ E  E Y+  V+KL + LL  ++  LGLK +  +E  G   A   +++NYY
Sbjct:    2 EVERVQDISSSSLLTEAIPLEFIRSEKEQPA-ITTFRGPTPAIPVVDLSD---PDEESVRRAVVK---ASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYY 206          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19
Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 3
Query:  147 FVRDLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            FVRD  ERP       S    IPII+L+ L   +          +  ACE+WG FQV+DHGI+  L+  + +++++FF LP EEK +Y    G   G+  + V   +  +DW         P   R+   WP KP  +  T E YS  +  L   LL+ ++ ++GL+     +        V +NYY
Sbjct:   19 FVRDEDERPKVAYNQFS--NEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYY 203          
The following BLAST results are available for this feature:
BLAST of FC930921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
SRG1_ARATH2.931e-3538.86Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA4.679e-3339.57S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FL3H_PETCR3.478e-2030.26Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_CALCH1.012e-1932.16Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
LDOX_PERFR2.255e-1928.05Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
FL3H_MATIN2.255e-1931.28Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
LDOX_ARATH2.945e-1927.57Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FLS_SOLTU2.945e-1927.91Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS1_ARATH2.945e-1930.19Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FNSI_PETCR3.846e-1931.55Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]

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Properties
Property NameValue
Genbank descriptionC34110E02EF PostHarvP1 Citrus clementina cDNA clone C34110E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930921 ID=FC930921; Name=FC930921; organism=Citrus clementina; type=EST; length=707bp
TCATATATTTTTCTTTAGTTGCAGTTAGATTATCGCTTCAAAACTCTGTT
TCCATGGCTCCAGTACCAACTTTTCCCGTCAAAGTTGGTCAAATAGATGA
TGTTCAAGAGCTGAGAAAAGTCGAACCTAGCACAATTCCTGAAAGATTTG
TTAGAGACTTGACTGAAAGGCCATCGTCACTGGCTACAGCTCTTTCTCCA
CCTGGTGGCATTCCCATCATCAACCTCTCAAAACTCATGAAGGGCAACCA
CGATGAATTTCACAATGAAATTTTAAACCTCGCAACTGCCTGCGAAGAGT
GGGGATTCTTTCAGGTGATTGACCATGGGATTGAACTGAACTTACTCGAG
AACATAGAGAAGGTGGCCAAAGATTTTTTCATGCTACCTTTAGAAGAGAA
AAAGAAGTACCCCATGCTACCAGGGACAGTTCAAGGATATGGGCAAGCTT
TTGTGTTCTCGGAGAACCAAAAACTTGATTGGTGCAACATGTTTGCCCTT
GGTGTCGAGCCTCACTTTATCAGGAACCCAAAACTCTGGCCAGCAAAGCC
AGCTGAGTTCAGTGAAACTCTAGAGACTTACTCAAGAGATGTGAGAAAAC
TTTGCCAGTGTCTGCTCAAGTACGTAGCAATAAGCCTTGGCTTGAAAGCA
GAAACTTTTGAAGAAATGTTTGGGGTTTGCTGTGCAGCTGTGAGGATGAA
CTACTAC
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