FC930933

Overview
NameFC930933
Unique NameFC930933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14677 contig Ccv1_Contig14677:48..656. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 327.791 bits (839), Expect = 2.681e-89
Identity = 163/189 (86.24%), Postives = 170/189 (89.95%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDVRLGANKF+ERQPIGTAAQ  D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATF FLYI+VLTVMGV  S +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIVGTF 188          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.126e-87
Identity = 160/190 (84.21%), Postives = 171/190 (90.00%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQ-TQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDVRLGANKF+ERQPIGTAAQ   D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATF FLYI++LTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFY++MQCLGA+CGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTF 189          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 3.277e-87
Identity = 161/193 (83.42%), Postives = 171/193 (88.60%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQT----QDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDVRLGANKF+ERQPIGTAAQ      D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATF FLYI+VLTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY++MQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTF 192          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 4.280e-87
Identity = 159/190 (83.68%), Postives = 172/190 (90.53%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQ-TQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDVRLGAN+++ERQPIGTAAQ   D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATF FLYI++LTVMGV KS++KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVASGYTKGDGLGAEIVGTF 189          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 315.849 bits (808), Expect = 1.054e-85
Identity = 157/190 (82.63%), Postives = 168/190 (88.42%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDG-KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            ME KE+DV LGANKF ERQP+G AAQ+QD  KDY EPPPAPLFEP EL SWSFYRAGIAEFIATF FLYI+VLTVMGVV+ ++KC TVGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYMVMQ LGAICGAGVVKGF G  ++G L GGAN VA GYTKGDGLGAEI+GTF
Sbjct:    1 MEAKEQDVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTF 190          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 1.377e-85
Identity = 157/189 (83.07%), Postives = 167/189 (88.36%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDV +GANKF ERQPIGTAAQT+  KDY EPPPAP FEPGELKSWSFYRAGIAEFIATF FLY++VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVAHGYTKG GLGAEI+GTF
Sbjct:    1 MEGKEEDVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIVGTF 187          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 1.798e-85
Identity = 157/189 (83.07%), Postives = 167/189 (88.36%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDVR+GANKF ERQPIGT+AQ+ D KDY EPPPAPLFEPGEL SWSFYRAGIAEFIATF FLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYM+MQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTF
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSTD-KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPT-PYQTLGGGANTVAHGYTKGSGLGAEIIGTF 187          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 3.067e-85
Identity = 156/189 (82.54%), Postives = 167/189 (88.36%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDVRLGAN+++ERQPIGTAAQ  + KDY EPPPAPLFE  EL SWSFYRAGIAEF+ATF FLYIS+LTVMGV KS++KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+GTF
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-EGLYMGAGGGANAVNPGYTKGDGLGAEIVGTF 188          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 4.006e-85
Identity = 156/188 (82.98%), Postives = 168/188 (89.36%), Query Frame = 1
Query:   37 EGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            E KEEDV+LGANKF E QP+GTAAQT   KDY EPPPAPLFEPGEL SWSFYRAGIAEF+ATF FLYI++LTVMG+ +S++ CS+VGIQG+AWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYMVMQCLGAICGAGVVKGFM  G Y RL GGANVV  GYTKGDGLGAEIIGTF
Sbjct:    3 ENKEEDVKLGANKFRETQPLGTAAQTD--KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFM-VGPYQRLGGGANVVNPGYTKGDGLGAEIIGTF 187          
BLAST of FC930933 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.522e-84
Identity = 156/189 (82.54%), Postives = 165/189 (87.30%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFPFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 600
            MEGKEEDVR+GANKF ERQPIGT+AQT   KDY EPPPAP FEPGEL SWSFYRAGIAEFIATF FLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTF
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQTD--KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEIIGTF 186          
The following BLAST results are available for this feature:
BLAST of FC930933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
PIP12_ORYSJ2.681e-8986.24Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_MAIZE1.126e-8784.21Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE3.277e-8783.42Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP11_ORYSJ4.280e-8783.68Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP2_PEA1.054e-8582.63Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP15_ARATH1.377e-8583.07Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH1.798e-8583.07Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_MAIZE3.067e-8582.54Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP1_SOLLC4.006e-8582.98Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_ARATH1.522e-8482.54Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionC34110F02EF PostHarvP1 Citrus clementina cDNA clone C34110F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930933 ID=FC930933; Name=FC930933; organism=Citrus clementina; type=EST; length=610bp
TGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGA
GGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGA
CGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCG
CCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGG
TATAGCCGAGTTCATAGCCACTTTTCCTTTCTTGTACATCTCCGTACTGA
CAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATT
CAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTG
CACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCC
TGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTG
ATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCAT
GGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTC
ATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTT
TGTTCTTGTC
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