FC930946

Overview
NameFC930946
Unique NameFC930946
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10325 contig Ccv1_Contig10325:27..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 4.993e-90
Identity = 166/196 (84.69%), Postives = 174/196 (88.78%), Query Frame = 3
Query:  102 IDQVQHPSVMQKVAGQLLHSSLSQNIQDYE----RPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            +DQVQHPSVMQKVAGQL  SS SQ+ Q Y      P +YQRR AYGNYSNAA Q+P+   A  DLSMVPSTASAICVQAPAEKGF+ FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN
Sbjct:    1 MDQVQHPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRRAAYGNYSNAALQHPV--RAFGDLSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 194          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 1.720e-82
Identity = 148/194 (76.29%), Postives = 166/194 (85.57%), Query Frame = 3
Query:   99 MIDQVQHPSVMQKVAGQLLHSSLSQNIQ-DYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            M+DQVQHP++ QK AGQ + SS+S+++Q  Y+RP+MYQR   YGNYSNAAFQ+P  S       M+ +TAS + VQ P EKGF  FA+DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN
Sbjct:    1 MVDQVQHPTIAQKAAGQFMRSSVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSR------MLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 188          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 8.536e-82
Identity = 146/197 (74.11%), Postives = 170/197 (86.29%), Query Frame = 3
Query:   99 MIDQVQHPSVMQKVAGQLLHSSLSQNIQDY----ERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            M++Q QHP+++QKV+GQLL SS+SQ+I+ Y    +RP  YQ+  AYGNYSNAAFQYP+V+A     S + +T S + VQAP EKGF  FAIDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRL+EPYKGI DCF RT++DEGI +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWFAGN
Sbjct:    1 MVEQTQHPTILQKVSGQLLSSSVSQDIRGYASASKRPATYQKHAAYGNYSNAAFQYPLVAA-----SQIATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGIGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGN 192          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.410e-76
Identity = 146/193 (75.65%), Postives = 158/193 (81.87%), Query Frame = 3
Query:  114 QHPSVMQKVAGQL-LHSSLSQNIQ----DYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            QHP+V QKVA Q+ L SSLSQ++       +RP + QRR  YGNYSNA  Q      AT DLS++ + AS + VQAP EKG A FA DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG  ALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN
Sbjct:    4 QHPTVYQKVASQMHLSSSLSQDVHARYGGIQRPALSQRRFPYGNYSNAGLQ---TCQATQDLSLIAANASPVFVQAPQEKGLAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFAALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 193          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.103e-76
Identity = 146/197 (74.11%), Postives = 160/197 (81.22%), Query Frame = 3
Query:   99 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYE---RPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            M D  QHP+V QK A QL L SSLSQ++       +P +YQR  AYGNYSNA  Q      AT DLS++ S AS + VQAP EKGFA FA DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLSEPYKGIG+CF RT+K+EG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN
Sbjct:    1 MADMNQHPTVFQKAANQLDLRSSLSQDVHARYGGVQPAIYQRHFAYGNYSNAGLQR---GQATQDLSLITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 194          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 1.463e-65
Identity = 130/197 (65.99%), Postives = 147/197 (74.62%), Query Frame = 3
Query:   99 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYE---RPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            M DQ   P+V+ K+ GQ  L S +S+ ++        + Y+RR A  NY   +   P +S +      VP   + +C  APAEKG   F IDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGI DCFKRT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN
Sbjct:    1 MADQANQPTVLHKLGGQFHLRSIISEGVRARNICPSVSSYERRFATRNYMTQSLWGPSMSVSGG--INVPVMQTPLCANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 195          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.238e-64
Identity = 131/197 (66.50%), Postives = 147/197 (74.62%), Query Frame = 3
Query:   99 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYER-PTM--YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            M DQ   P+V+ K+ GQ  L SS S+ ++     P+   Y+RR A  NY   +   P +S +      VP   + +   APAEKG   F IDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGI DCFKRT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN
Sbjct:    1 MADQANQPTVLHKLGGQFHLSSSFSEGVRARNICPSFSPYERRFATRNYMTQSLWGPSMSVSGG--INVPVMPTPLFANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 195          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.513e-62
Identity = 127/202 (62.87%), Postives = 142/202 (70.30%), Query Frame = 3
Query:   99 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYE---RPTMYQRRGAYGNYS-----NAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            M +Q   P+V+QK  GQ  L SS S+ ++        + Y RR    +Y      N     P++S+            S I   APAEKG   F IDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWF GN
Sbjct:    1 MAEQANQPTVLQKFGGQFHLGSSFSEGVRARNICPSVSSYDRRFTTRSYMTQGLVNGGINVPMMSS------------SPIFANAPAEKGGKNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFGGN 190          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.571e-57
Identity = 107/133 (80.45%), Postives = 117/133 (87.97%), Query Frame = 3
Query:  282 LSMVPSTASAICVQAPAEK-GFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            +S+   ++S +   AP EK G   FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN
Sbjct:    7 ISVPMMSSSPLFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGN 139          
BLAST of FC930946 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.241e-56
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 3
Query:  327 PAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN 677
            P +KG   FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN
Sbjct:   23 PEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGN 139          
The following BLAST results are available for this feature:
BLAST of FC930946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ADT1_GOSHI4.993e-9084.69ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_ARATH1.720e-8276.29ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT2_ARATH8.536e-8274.11ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT2_SOLTU1.410e-7675.65ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_SOLTU4.103e-7674.11ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT1_MAIZE1.463e-6565.99ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT2_MAIZE1.238e-6466.50ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT_ORYSJ7.513e-6262.87ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_WHEAT5.571e-5780.45ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]
ADT1_WHEAT1.241e-5688.03ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionC34110G03EF PostHarvP1 Citrus clementina cDNA clone C34110G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930946 ID=FC930946; Name=FC930946; organism=Citrus clementina; type=EST; length=678bp
GAAAATATCTCTGCTTCTCTCGCTTTTCGCACGCCTTTCCTTTCTAAGCA
GAGCGGGAGGCGGACACCAATCTGTCATTTTTCAAAGGAAAAGTCACAAT
GATTGATCAGGTTCAACATCCTTCCGTCATGCAGAAGGTAGCTGGACAGC
TCCTTCATTCCAGCCTTTCCCAAAATATTCAGGATTATGAAAGGCCAACC
ATGTACCAAAGACGTGGTGCTTATGGGAACTACTCCAATGCTGCATTCCA
ATACCCCATAGTCAGTGCAGCTACAACCGATCTATCTATGGTGCCGTCAA
CTGCATCTGCTATTTGCGTCCAAGCCCCAGCTGAGAAAGGCTTTGCAGGC
TTTGCTATCGATTTCCTTATGGGTGGAGTTTCTGCTGCTGTGTCCAAAAC
AGCTGCTGCTCCCATTGAGCGTGTTAAGCTTTTGATTCAAAACCAAGATG
AGATGATCAAGAGTGGTAGGCTATCTGAACCCTACAAGGGCATTGGTGAT
TGTTTTAAGCGTACAATGAAGGATGAGGGTATTGTTGCTTTGTGGAGAGG
AAATACCGCTAATGTTATCCGTTACTTCCCCACTCAGGCCCTGAACTTTG
CATTCAAGGATTACTTCAAGAGGCTCTTCAACTTCAAGAAAGACAGGGAT
GGTTACTGGAAATGGTTTGCTGGTAATT
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