FC930949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 2.531e-90 Identity = 175/235 (74.47%), Postives = 192/235 (81.70%), Query Frame = 3 Query: 3 TCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQS-GSVE----EGDRQPKPSEEAD-YSSSANEGNWRTS--XXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 TCL ILE+ML TCLY VTKCNRAE AL +LR NKNG+DIVISDVHMPDMDGFKLLE VGLEMDLPVIMMSADDSK VV+KGVTHGA DYLIKPVRIEALKNIWQHVVRK++NEW E S GS+E + DRQ + E+AD SSS NEGN R+S +S+LKKPRVVWSVELHQQFV+AVNQLG+DKAVPKKILE+MNVPGLTRENVASHLQKYR+YLR Sbjct: 38 TCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLR 272
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2) HSP 1 Score: 330.872 bits (847), Expect = 4.317e-90 Identity = 177/247 (71.66%), Postives = 195/247 (78.95%), Query Frame = 3 Query: 3 TCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEE-GDRQPKP------------SEEA--DYSSSANEG-NWRTS----XXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 TCL ILE+MLRTCLYEVTKCNRAE+AL +LR NK+G+DIVISDVHMPDMDGFKLLE VGLEMDLPVIMMSADDSK VV+KGVTHGA DYLIKPVR+EALKNIWQHVVRKR++EW E SGS+EE G+RQ + E+A D SSS NEG NWR+S S LKKPRVVWSVELHQQFV+AVNQLG++KAVPKKILELMNVPGLTRENVASHLQKYR+YLR Sbjct: 47 TCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLR 293
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.144e-66 Identity = 135/230 (58.70%), Postives = 161/230 (70.00%), Query Frame = 3 Query: 3 TCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANEGNW---RTSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 TCL+ILE +LR C Y VT N+A+ AL++LR NKN +D+VISDV MPDMDGFKLLE VGLEMDLPVIM+SA + VMKGVTHGACDYL+KPVRIE LKNIWQHVVR R + + GS GD++ E +S N G R + KK RVVW+VELH++FV+AVNQLG +KA+PKKIL+LMNV LTRENVASHLQK+RLYL+ Sbjct: 27 TCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFD-----KNRGSNNNGDKRDGSGNEGVGNSDPNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLK 251
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.115e-64 Identity = 135/230 (58.70%), Postives = 158/230 (68.70%), Query Frame = 3 Query: 3 TCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANE---GNWRTSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLGID-KAVPKKILELMNVPGLTRENVASHLQKYRLYL 680 T L+ILEKML+ C YEVT C A AL +LR K+GYDIVISDV+MPDMDGFKLLE VGLE+DLPVIMMS D VMKGV HGACDYL+KP+R++ LK IWQHV+RK+ E +D+E G E G +EA + + G R +S+ KK RVVWS ELH +FV+AVNQ+G D KA PKKIL+LMNVP LTRENVASHLQKYRLYL Sbjct: 21 TWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCG-YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYL 249
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.498e-63 Identity = 128/231 (55.41%), Postives = 164/231 (71.00%), Query Frame = 3 Query: 3 TCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRK---RKNEWKDLEQSGSVEEGDRQPKPS-EEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 TCLRIL+ +L+ C Y VT N+A+ AL++LR NKN +D+VISDV MPDMDGFKLLE VGLEMDLPVIM+SA + VMKGV HGACDYL+KPVRIE LKNIWQHVVRK +KN+ SG+ ++ +R+ K EE + N+ + T+ KKPRV+W+ ELH +F++AV+ LG+++AVPKKIL+LMNV LTRENVASHLQK+R+ L+ Sbjct: 27 TCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDDPTAQ------------------KKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALK 239
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 129/238 (54.20%), Postives = 163/238 (68.49%), Query Frame = 3 Query: 3 TCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGL-EMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQ----------PKPSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 +CL ILEKML +Y+VT C++A++AL +LR K+ +D+V+SDVHMP M+G+ LL+QVGL EMDLPVIMMS D VM G+ HGACDYLIKP+R E LKNIWQHVVR++ K+L S ++E+ + SEE+ + + S S KK RVVWS+ELHQQFV+AVN+LGIDKAVPK+ILELMNVPGL+RENVASHLQK+RLYL+ Sbjct: 21 SCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNS--KKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLK 256
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 5.499e-61 Identity = 130/242 (53.72%), Postives = 156/242 (64.46%), Query Frame = 3 Query: 3 TCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDL---EQSGSV------------EEGDRQPKPSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 TCLR LE++L C Y VTK + AL+MLR N N +D+VISDV MPD DGFKLLE +GLEMDLPVIM+SA VMKG+ HGACDYL+KPV ++ L+NIW HVV+K + L +S SV + GD EE D S +G+ + T KKPRVVWS ELHQ+FVSAV QLG+DKAVPKKIL+LM++ GLTRENVASHLQKYRLYL+ Sbjct: 28 TCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKNIKSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGD------------------GSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLK 250
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.721e-38 Identity = 90/232 (38.79%), Postives = 128/232 (55.17%), Query Frame = 3 Query: 9 LRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----PSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTS--TLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 L ++E +L C Y+VT A+ + N D+VISD P DG +L++V + +P ++M++ VMK V +GA D+L+KPVRIE L NIWQH+ RK+ + K+ G++E+ P + A S+A E + T L K R+ W+ +LH+QF++AVN LG DKAVPKKIL +M V LTRE VASHLQKYR+ L+ Sbjct: 23 LSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLK 254
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.721e-38 Identity = 90/232 (38.79%), Postives = 128/232 (55.17%), Query Frame = 3 Query: 9 LRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----PSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTS--TLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLR 683 L ++E +L C Y+VT A+ + N D+VISD P DG +L++V + +P ++M++ VMK V +GA D+L+KPVRIE L NIWQH+ RK+ + K+ G++E+ P + A S+A E + T L K R+ W+ +LH+QF++AVN LG DKAVPKKIL +M V LTRE VASHLQKYR+ L+ Sbjct: 23 LSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLK 254
BLAST of FC930949 vs. ExPASy Swiss-Prot
Match: ARR20_ARATH (Putative two-component response regulator ARR20 OS=Arabidopsis thaliana GN=ARR20 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.903e-37 Identity = 92/225 (40.89%), Postives = 130/225 (57.78%), Query Frame = 3 Query: 18 LEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKR--KNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKKILELM----NVPGLTRENVASHLQKYR 671 L+ ++ Y+VTK E A+ L NK+ D+VI D HMPD++G L +G +MDLPV++MS + K+ VM+ + +GACD+L+KPV E + +W+HV RKR K+ +SG+VE + E+ + S EG+ T S KKPR+ W+ ELH +F AV ++G ++KA PK IL+ M NV GLTR NVASHLQKYR Sbjct: 54 LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNT----------CDHKEEKSPTKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYR 268 The following BLAST results are available for this feature:
BLAST of FC930949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930949 ID=FC930949; Name=FC930949; organism=Citrus clementina; type=EST; length=727bpback to top |