FC930951
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: U172_ARATH (UPF0172 protein At5g55940 OS=Arabidopsis thaliana GN=EMB2731 PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 8.510e-78 Identity = 142/197 (72.08%), Postives = 165/197 (83.76%), Query Frame = 3 Query: 138 GELKYELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANAVLSDYISSEKWQXXXXXXXXXXXXXXXWLN 728 GELKYE+SQNAYIKLVL + +HKTAAVNGVL+GR+SP++D VVEI+DSVPLFHS+L LLP LEISLIMIEEHY AQGL IVGYFHANERFDD+EL +AKNIG+HI RYFPQ +LLL+NKKLEAL KGK+RSPVMQL ++DASKNW++VG+DGG +LL KEP+AN VLSDYISSEKW+ WLN Sbjct: 7 GELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNNKKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKDVTDVDDHLDDVTKDWLN 203
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: F158A_RAT (UPF0172 protein FAM158A OS=Rattus norvegicus GN=Fam158a PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 135 MGELKYELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 521 MGE+ E+S AY K+ L A ++ AAVNG+LL + + + + D VPLFHSHL L LE++L ++ + GL + GY+HAN DD +A I I +FP +++LDNKKL P+ Sbjct: 1 MGEV--EISARAYGKMCLHASRYPHAAVNGLLLAPATRSGECLC-LTDCVPLFHSHLALSVMLEVALNQVDVWATQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPNAVLIMLDNKKLVTWPR 126
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: F158A_MOUSE (UPF0172 protein FAM158A OS=Mus musculus GN=Fam158a PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 51/129 (39.53%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 135 MGELKYELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 521 MGE+ E+S AY K+ L A ++ AAVNG+LL + + + + D VPLFHSHL L LE++L ++ + GL + GY+HAN DD +A I I +FP+ +++LDNKKL P+ Sbjct: 1 MGEV--EISARAYGKMCLHASRYPHAAVNGLLLAPATGSGECLC-LTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPRAVLIMLDNKKLVTRPR 126
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: F158A_HUMAN (UPF0172 protein FAM158A OS=Homo sapiens GN=FAM158A PE=2 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 49/129 (37.98%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 135 MGELKYELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 521 MGE+ E+S AY+K+ L A ++ AAVNG+ L +P++ + + D VPLFHSHL L LE++L ++ + GL + GY+HAN +D +A I I +FP +++LDN+KL P+ Sbjct: 1 MGEV--EISALAYVKMCLHAARYPHAAVNGLFLAP-APRSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPR 126
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: U172_DROME (UPF0172 protein CG3501 OS=Drosophila melanogaster GN=CG3501 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 150 YELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSI-AKNIGNHICRYFPQCAVLLLDNK 500 Y++S+ AY KL+ A K+ AVNG+LL + + V EI D++PLFH L + P E++L++I+ H +GL I GY+ A E F D ++D A I + I F +++DNK Sbjct: 4 YKVSERAYAKLIFHAAKYPHQAVNGLLLAEKTSKGSQV-EIVDAIPLFHQCLYVTPMAEVALMLIDAHAEREGLVIAGYYAAPENFYDNQVDKTPAAKIADKIQENFKNACFVVVDNK 120
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: CX4NB_MOUSE (Neighbor of COX4 OS=Mus musculus GN=Cox4nb PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 41/124 (33.06%), Postives = 65/124 (52.42%), Query Frame = 3 Query: 153 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQND------AVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKK 503 +L+ AY K+VL K+ AVNG+L+ R P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGSHTLFVDCIPLFHGTLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFGDAALIMVDNAK 128
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: CX4NB_RAT (Neighbor of COX4 OS=Rattus norvegicus GN=Cox4nb PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.135e-12 Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 3 Query: 153 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQNDAV------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKK 503 +L+ AY K+VL K+ AVNG+L+ R P+ + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFVDCIPLFHGTLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDAALIMVDNAK 128
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: CX4NB_HUMAN (Neighbor of COX4 OS=Homo sapiens GN=COX4NB PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 40/127 (31.50%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 153 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQNDAV---------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKK 503 +L+ AY K+VL K+ AVNG+L+ + P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDTALIMVDNTK 131
BLAST of FC930951 vs. ExPASy Swiss-Prot
Match: CX4NB_BOVIN (Neighbor of COX4 OS=Bos taurus GN=COX4NB PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 39/127 (30.71%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 153 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQNDAV---------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKK 503 +L+ AY K+VL K+ AV+G+L+ + P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVDGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDTALIMVDNTK 131 The following BLAST results are available for this feature:
BLAST of FC930951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930951 ID=FC930951; Name=FC930951; organism=Citrus clementina; type=EST; length=730bpback to top |